Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 8.3e-266 919.8 477 100.0
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 1.1e-140 504.2 383 71.5
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 3.8e-125 452.6 482 57.5
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 1.0e-122 444.5 447 58.2
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 1.4e-119 434.1 475 56.8
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 5.3e-119 432.2 483 55.1
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 3.4e-118 429.5 475 57.5
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 1.7e-117 427.2 491 56.8
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 3.5e-115 419.5 505 49.7
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 1.8e-111 407.1 457 57.1
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 1.5e-89 334.3 477 47.6
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 4.6e-83 312.8 450 47.6
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 6.1e-83 312.4 452 46.9
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 2.0e-81 307.4 427 47.8
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 4.4e-81 306.2 450 47.3
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 5.7e-81 305.8 477 43.6
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 7.4e-81 305.4 423 45.9
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 3.4e-78 296.6 437 45.1
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 7.7e-78 295.4 446 46.2
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 1.9e-76 290.8 426 45.1
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 4.7e-75 286.2 464 44.4
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 2.0e-73 280.8 456 43.6
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 2.6e-73 280.4 464 43.1
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 2.2e-72 277.3 460 41.5
Hma1.2p1_1176F.1_g264250 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 3.7e-72 276.6 340 52.6
Hma1.2p1_1176F.1_g264255 Hydrangea macrophylla HOM05D007962 ORTHO05D009990 3.7e-72 276.6 340 52.6
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 9.1e-71 271.9 452 43.4
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 3.5e-70 270.0 481 39.9
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 4.5e-70 269.6 450 42.0
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 7.7e-70 268.9 464 42.7
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 1.7e-69 267.7 435 43.7
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 2.9e-69 266.9 450 41.6
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 5.0e-69 266.2 439 43.7
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 3.0e-66 256.9 519 40.1
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 5.2e-66 256.1 517 36.9
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 2.6e-65 253.8 449 43.2
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 7.5e-65 252.3 451 42.6
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 6.3e-64 249.2 425 41.4
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 2.0e-62 244.2 428 40.7
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 2.0e-62 244.2 451 40.1
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 3.0e-58 230.3 389 43.4
MD11G1236000 Malus domestica HOM05D007962 ORTHO05D009990 3.7e-56 223.4 391 44.8
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 8.6e-53 212.2 445 38.2
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 1.2e-51 208.4 347 42.7
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 2.1e-51 207.6 472 36.7
Ciclev10010584m.g Citrus clementina HOM05D007962 ORTHO05D009990 1.4e-50 204.9 429 39.4
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 4.4e-49 199.9 456 36.4
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 2.7e-46 190.7 453 37.7
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 4.5e-46 189.9 433 37.0
ECA240G4716 Erigeron canadensis HOM05D000200 ORTHO05D001546 4.5e-46 189.9 422 37.9
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 6.6e-45 186.0 487 34.7
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 5.6e-44 183.0 502 33.9
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 5.6e-44 183.0 484 33.9
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 1.6e-43 181.4 435 36.1
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 2.1e-43 181.0 492 32.7
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 3.6e-43 180.3 585 31.8
Aqoxy1G03880 Aquilegia oxysepala HOM05D007962 ORTHO05D009990 4.7e-43 179.9 541 31.6
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 1.2e-41 175.3 320 41.2
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 1.5e-41 174.9 571 31.7
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 2.2e-40 171.0 289 38.8
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 3.5e-38 163.7 504 31.5
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 3.5e-38 163.7 537 31.3
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 1.7e-37 161.4 280 42.5
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 2.3e-37 161.0 498 34.7
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 3.9e-37 160.2 527 30.7
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 3.6e-35 153.7 440 35.7
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 5.2e-34 149.8 331 37.5
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 8.9e-34 149.1 432 37.0
FvH4_3g21030 Fragaria vesca HOM05D007962 ORTHO05D009990 6.4e-32 142.9 343 37.3
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 6.4e-32 142.9 464 31.7
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 8.3e-32 142.5 432 31.9
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 3.2e-31 140.6 475 31.2
Lsat_1_v5_gn_9_95621 Lactuca sativa HOM05D007962 ORTHO05D009990 3.5e-30 137.1 353 35.7
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 7.8e-30 136.0 392 33.4
Medtr8g464490 Medicago truncatula HOM05D007962 ORTHO05D009990 5.6e-28 129.8 496 29.0
Sed0012704 Sechium edule HOM05D007962 ORTHO05D009990 9.5e-28 129.0 411 35.5
CDE11G0480 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 2.1e-22 111.3 403 29.5
HanXRQChr13g0393921 Helianthus annuus HOM05D003190 ORTHO05D009990 4.3e-20 103.6 100 54.0
SEGI_13433 Sequoiadendron giganteum HOM05D007962 ORTHO05D009990 9.9e-09 65.9 88 43.2
AagrBONN_evm.TU.Sc2ySwM_228.932 Anthoceros agrestis HOM05D020562 ORTHO05D009990 7.1e-07 59.7 148 29.7
Mapoly0016s0066 Marchantia polymorpha HOM05D020562 ORTHO05D030110 1.6e-06 58.5 95 32.6


User provided reference genes

Program Settings