Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22359 Davidia involucrata HOM05D004171 ORTHO05D004983 8.6e-151 537.0 270 100.0
Dinv08350 Davidia involucrata HOM05D004171 ORTHO05D004983 2.0e-123 446.0 240 92.1
CSS0009250 Camellia sinensis var. sinensis HOM05D004171 ORTHO05D004983 2.4e-121 439.1 266 82.3
Actinidia05147 Actinidia chinensis HOM05D004171 ORTHO05D004983 1.0e-119 433.7 266 79.7
Actinidia09971 Actinidia chinensis HOM05D004171 ORTHO05D004983 3.0e-119 432.2 267 79.8
TAR627G1073 Trochodendron aralioides HOM05D004171 ORTHO05D004983 3.9e-119 431.8 268 79.5
TAR629G3225 Trochodendron aralioides HOM05D004171 ORTHO05D004983 1.1e-118 430.3 268 79.5
Hma1.2p1_1176F.1_g264170 Hydrangea macrophylla HOM05D004171 ORTHO05D004983 1.6e-117 426.4 266 79.7
Sabra11G0111100 Salix brachista HOM05D004171 ORTHO05D004983 2.8e-117 425.6 265 77.0
Nitab4.5_0000297g0160 Nicotiana tabacum HOM05D004171 ORTHO05D004983 2.4e-116 422.5 270 77.8
Cc05_g12750 Coffea canephora HOM05D004171 ORTHO05D004983 1.5e-115 419.9 268 76.9
Potri.011G126300 Populus trichocarpa HOM05D004171 ORTHO05D004983 3.4e-115 418.7 265 75.5
Peaxi162Scf01216g00047 Petunia axillaris HOM05D004171 ORTHO05D004983 5.8e-115 417.9 271 76.0
Nitab4.5_0009110g0010 Nicotiana tabacum HOM05D004171 ORTHO05D004983 9.9e-115 417.2 270 76.3
Manes.15G082500 Manihot esculenta HOM05D004171 ORTHO05D004983 1.7e-114 416.4 271 75.6
Cfa020499 Carpinus fangiana HOM05D004171 ORTHO05D004983 3.8e-114 415.2 270 75.9
Rhsim06G0192400 Rhododendron simsii HOM05D004171 ORTHO05D004983 4.2e-113 411.8 269 76.2
Atru.chr2.2929 Acer truncatum HOM05D004171 ORTHO05D004983 1.6e-112 409.8 276 73.6
MSTRG.14383 Avicennia marina HOM05D004171 ORTHO05D004983 1.6e-112 409.8 266 75.6
CSS0026220 Camellia sinensis var. sinensis HOM05D004171 ORTHO05D004983 1.6e-112 409.8 271 74.5
Ciclev10009152m.g Citrus clementina HOM05D004171 ORTHO05D004983 2.1e-112 409.5 277 75.5
PGSC0003DMG400019283 Solanum tuberosum HOM05D004171 ORTHO05D004983 2.7e-112 409.1 276 73.2
Solyc07g063620.3 Solanum lycopersicum HOM05D004171 ORTHO05D004983 4.6e-112 408.3 276 73.2
Sopen07g031800 Solanum pennellii HOM05D004171 ORTHO05D004983 4.6e-112 408.3 276 73.2
MSTRG.12927 Avicennia marina HOM05D004171 ORTHO05D004983 6.0e-112 407.9 270 73.7
Eucgr.F01074 Eucalyptus grandis HOM05D004171 ORTHO05D004983 7.8e-112 407.5 266 76.3
CiPaw.11G177500 Carya illinoinensis HOM05D004171 ORTHO05D004983 1.0e-111 407.1 268 75.4
Oeu006766.1 Olea europaea HOM05D004171 ORTHO05D004983 1.3e-111 406.8 271 75.3
Duzib213G0518 Durio zibethinus HOM05D004171 ORTHO05D004983 1.7e-111 406.4 270 73.3
ClCG11G018550 Citrullus lanatus HOM05D004171 ORTHO05D004983 2.3e-111 406.0 270 74.1
Haze_09543 Corylus avellana HOM05D004171 ORTHO05D004983 3.9e-111 405.2 270 74.4
Glyma.12G134300 Glycine max HOM05D004171 ORTHO05D004983 1.1e-110 403.7 246 78.0
COL.COLO4_09488 Corchorus olitorius HOM05D004171 ORTHO05D004983 2.5e-110 402.5 274 71.2
Duzib268G0239 Durio zibethinus HOM05D004171 ORTHO05D004983 4.3e-110 401.7 270 73.7
Lj3g0003583 Lotus japonicus HOM05D004171 ORTHO05D004983 1.6e-109 399.8 266 72.6
Manes.03G117000 Manihot esculenta HOM05D004171 ORTHO05D004983 2.1e-109 399.4 273 71.4
Thecc.07G070400 Theobroma cacao HOM05D004171 ORTHO05D004983 4.8e-109 398.3 274 71.2
GSVIVG01014444001 Vitis vinifera HOM05D004171 ORTHO05D004983 4.8e-109 398.3 269 73.2
Aqoxy1G02716 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 8.1e-109 397.5 273 72.5
MBI02_g13230_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 8.1e-109 397.5 274 71.5
Medtr8g464760 Medicago truncatula HOM05D004171 ORTHO05D004983 1.1e-108 397.1 263 73.0
arahy.Tifrunner.gnm1.ann1.SXKR4Z Arachis hypogaea HOM05D004171 ORTHO05D004983 1.8e-108 396.4 267 70.8
PSO541G5656 Papaver somniferum HOM05D004171 ORTHO05D004983 2.4e-108 396.0 269 74.0
Prupe.4G191500 Prunus persica HOM05D004171 ORTHO05D004983 2.4e-108 396.0 272 72.4
PGR083G0998 Punica granatum HOM05D004171 ORTHO05D004983 4.0e-108 395.2 263 74.5
RcHm_v2.0_Chr5g0036121 Rosa chinensis HOM05D004171 ORTHO05D004983 4.0e-108 395.2 276 70.7
MD11G1235500 Malus domestica HOM05D004171 ORTHO05D004983 6.9e-108 394.4 272 71.3
CAN.G162.108 Capsicum annuum HOM05D004171 ORTHO05D004983 1.5e-107 393.3 276 71.4
Lj1A854T34 Lonicera japonica HOM05D004171 ORTHO05D004983 2.0e-107 392.9 270 73.3
Phvul.011G138400 Phaseolus vulgaris HOM05D004171 ORTHO05D004983 2.6e-107 392.5 272 70.2
PSO675G0635 Papaver somniferum HOM05D004171 ORTHO05D004983 3.4e-107 392.1 269 72.1
Duzib170G1088 Durio zibethinus HOM05D004171 ORTHO05D004983 4.5e-107 391.7 276 70.3
Cpa.g.sc12.36 Carica papaya HOM05D004171 ORTHO05D004983 5.8e-107 391.3 266 70.3
Gohir.A04G025600 Gossypium hirsutum HOM05D004171 ORTHO05D004983 1.3e-106 390.2 271 71.6
Ah.04g165380 Amaranthus hybridus HOM05D004171 ORTHO05D004983 2.9e-106 389.0 267 71.5
MD03G1217700 Malus domestica HOM05D004171 ORTHO05D004983 2.9e-106 389.0 272 70.6
Gorai.009G430400 Gossypium raimondii HOM05D004171 ORTHO05D004983 6.4e-106 387.9 271 71.6
VMungo1127G0586 Vigna mungo HOM05D004171 ORTHO05D004983 6.4e-106 387.9 250 73.6
Gohir.D05G362300 Gossypium hirsutum HOM05D004171 ORTHO05D004983 8.4e-106 387.5 271 71.6
QL08p017518 Quercus lobata HOM05D004171 ORTHO05D004983 3.2e-105 385.6 272 71.7
TWI38G2120 Tripterygium wilfordii HOM05D004171 ORTHO05D004983 7.1e-105 384.4 269 70.3
CiPaw.12G123300 Carya illinoinensis HOM05D004171 ORTHO05D004983 1.6e-104 383.3 270 71.5
CsaV3_3G044320 Cucumis sativus L. HOM05D004171 ORTHO05D004983 2.7e-104 382.5 272 71.0
MELO3C018184.2 Cucumis melo HOM05D004171 ORTHO05D004983 4.6e-104 381.7 272 70.6
vmacro11810 Vaccinium macrocarpon HOM05D004171 ORTHO05D004983 6.0e-104 381.3 265 71.7
SGA_v2.0_scaffold9G04958 Striga asiatica HOM05D004171 ORTHO05D004983 1.3e-103 380.2 263 70.0
Gorai.013G165800 Gossypium raimondii HOM05D004171 ORTHO05D004983 3.9e-103 378.6 273 68.5
Gohir.D13G148000 Gossypium hirsutum HOM05D004171 ORTHO05D004983 5.1e-103 378.3 273 68.5
PGR031G0147 Punica granatum HOM05D004171 ORTHO05D004983 5.1e-103 378.3 274 70.4
FvH4_3g21110 Fragaria vesca HOM05D004171 ORTHO05D004983 1.1e-102 377.1 277 68.2
FAN11G0158 Fragaria x ananassa HOM05D004171 ORTHO05D004983 1.1e-102 377.1 277 68.6
FAN25G0362 Fragaria x ananassa HOM05D004171 ORTHO05D004983 1.1e-102 377.1 277 68.2
Eucgr.F03360 Eucalyptus grandis HOM05D004171 ORTHO05D004983 1.9e-102 376.3 237 78.9
AUR62015590 Chenopodium quinoa HOM05D004171 ORTHO05D004983 2.5e-102 375.9 267 69.3
AUR62029303 Chenopodium quinoa HOM05D004171 ORTHO05D004983 2.5e-102 375.9 267 69.3
FAN16G3093 Fragaria x ananassa HOM05D004171 ORTHO05D004983 2.5e-102 375.9 277 68.6
TWI39G0675 Tripterygium wilfordii HOM05D004171 ORTHO05D004983 5.6e-102 374.8 234 77.4
Gohir.A13G143300 Gossypium hirsutum HOM05D004171 ORTHO05D004983 9.6e-102 374.0 274 67.5
Psat4g140880 Pisum sativum HOM05D004171 ORTHO05D004983 9.6e-102 374.0 266 69.2
SalBow7G4117 Salvia bowleyana HOM05D004171 ORTHO05D004983 2.1e-101 372.9 247 72.9
arahy.Tifrunner.gnm1.ann1.EUN1K4 Arachis hypogaea HOM05D004171 ORTHO05D004983 6.2e-101 371.3 234 73.9
TPR.G25226 Trifolium pratense HOM05D004171 ORTHO05D004983 1.1e-100 370.5 272 68.0
Lsat_1_v5_gn_7_105981 Lactuca sativa HOM05D004171 ORTHO05D004983 4.0e-100 368.6 278 65.5
THA.LOC104799905 Tarenaya hassleriana HOM05D004171 ORTHO05D004983 5.3e-100 368.2 277 64.3
Lalb_Chr19g0134521 Lupinus albus HOM05D004171 ORTHO05D004983 6.9e-100 367.9 269 66.9
Sed0003677 Sechium edule HOM05D004171 ORTHO05D004983 9.0e-100 367.5 266 66.5
HanXRQChr02g0031371 Helianthus annuus HOM05D004171 ORTHO05D004983 4.5e-99 365.2 272 65.8
Glyma.12G218800 Glycine max HOM05D004171 ORTHO05D004983 5.8e-99 364.8 260 68.5
Sed0025378 Sechium edule HOM05D004171 ORTHO05D004983 7.6e-99 364.4 268 67.2
Migut.H01900 Erythranthe guttata HOM05D004171 ORTHO05D004983 1.0e-98 364.0 235 74.0
MBI18_g19831_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 3.8e-98 362.1 266 65.4
Hund23371 Selenicereus undatus HOM05D004171 ORTHO05D004983 3.8e-98 362.1 268 66.8
CDE02G1151 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 1.1e-97 360.5 267 67.4
Lalb_Chr01g0017051 Lupinus albus HOM05D004171 ORTHO05D004983 1.4e-97 360.1 264 65.2
THA.LOC104813397 Tarenaya hassleriana HOM05D004171 ORTHO05D004983 3.2e-97 359.0 282 63.1
arahy.Tifrunner.gnm1.ann1.H2QIWP Arachis hypogaea HOM05D004171 ORTHO05D004983 9.3e-97 357.5 263 63.9
arahy.Tifrunner.gnm1.ann1.UD3S3B Arachis hypogaea HOM05D004171 ORTHO05D004983 9.3e-97 357.5 263 63.9
EL10Ac4g08047 Beta vulgaris HOM05D004171 ORTHO05D004983 1.2e-96 357.1 303 61.7
Sc16g0006730 Simmondsia chinensis HOM05D004171 ORTHO05D004983 2.1e-96 356.3 230 72.2
ATR0693G292 Amborella trichopoda HOM05D004171 ORTHO05D004983 2.3e-95 352.8 273 64.1
MBI18_g27681_MAGBIO Magnolia biondii HOM05D004171 ORTHO05D004983 3.9e-95 352.1 285 62.1
BcaB05g22115 Brassica carinata HOM05D004171 ORTHO05D004983 4.3e-94 348.6 277 61.4
DCAR_009989 Daucus carota HOM05D004171 ORTHO05D004983 5.7e-94 348.2 235 70.6
BraA10t43247Z Brassica rapa HOM05D004171 ORTHO05D004983 7.4e-94 347.8 275 64.0
Thhalv10025946m.g Eutrema salsugineum HOM05D004171 ORTHO05D004983 7.4e-94 347.8 276 61.2
BcaB08g35778 Brassica carinata HOM05D004171 ORTHO05D004983 9.6e-94 347.4 275 64.4
BcaNung03036 Brassica carinata HOM05D004171 ORTHO05D004983 9.6e-94 347.4 280 61.4
BcaNung05201 Brassica carinata HOM05D004171 ORTHO05D004983 9.6e-94 347.4 280 61.4
AL8G29560 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 1.3e-93 347.1 280 62.9
BraA02t06113Z Brassica rapa HOM05D004171 ORTHO05D004983 1.3e-93 347.1 277 62.1
C09p44520 Brassica napus HOM05D004171 ORTHO05D004983 1.6e-93 346.7 275 63.6
Thhalv10014333m.g Eutrema salsugineum HOM05D004171 ORTHO05D004983 1.6e-93 346.7 278 62.9
Aa31LG3G10200 Aethionema arabicum HOM05D004171 ORTHO05D004983 2.1e-93 346.3 277 62.1
AL7G25450 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 2.1e-93 346.3 275 60.7
A02p10500 Brassica napus HOM05D004171 ORTHO05D004983 2.8e-93 345.9 277 62.1
Carub.0007s1352 Capsella rubella HOM05D004171 ORTHO05D004983 3.7e-93 345.5 275 60.4
Sp6g16280 Schrenkiella parvula HOM05D004171 ORTHO05D004983 3.7e-93 345.5 278 62.6
BcaC04g20360 Brassica carinata HOM05D004171 ORTHO05D004983 4.8e-93 345.1 275 62.9
BcaNung05200 Brassica carinata HOM05D004171 ORTHO05D004983 4.8e-93 345.1 279 61.3
BolC9t57324H Brassica oleracea HOM05D004171 ORTHO05D004983 4.8e-93 345.1 275 62.9
A10p11530 Brassica napus HOM05D004171 ORTHO05D004983 6.2e-93 344.7 275 63.6
ECA236G3492 Erigeron canadensis HOM05D004171 ORTHO05D004983 8.2e-93 344.4 271 63.8
BcaC09g50581 Brassica carinata HOM05D004171 ORTHO05D004983 1.1e-92 344.0 278 60.8
BolC1t02294H Brassica oleracea HOM05D004171 ORTHO05D004983 1.1e-92 344.0 278 60.8
Sp7g25280 Schrenkiella parvula HOM05D004171 ORTHO05D004983 1.1e-92 344.0 277 59.6
AT4G27350 Arabidopsis thaliana HOM05D004171 ORTHO05D004983 1.4e-92 343.6 275 59.6
AT5G54240 Arabidopsis thaliana HOM05D004171 ORTHO05D004983 1.8e-92 343.2 280 61.8
CARHR267500 Cardamine hirsuta HOM05D004171 ORTHO05D004983 1.8e-92 343.2 278 61.9
VMungo1080G1500 Vigna mungo HOM05D004171 ORTHO05D004983 5.3e-92 341.7 234 69.2
C01p23480 Brassica napus HOM05D004171 ORTHO05D004983 6.9e-92 341.3 278 60.1
CANSAT11G0840 Cannabis sativa HOM05D004171 ORTHO05D004983 2.0e-91 339.7 270 66.3
A01p18530 Brassica napus HOM05D004171 ORTHO05D004983 2.6e-91 339.3 279 59.9
BraA01t01802Z Brassica rapa HOM05D004171 ORTHO05D004983 2.6e-91 339.3 279 59.9
CARHR235000 Cardamine hirsuta HOM05D004171 ORTHO05D004983 5.8e-91 338.2 275 59.3
BcaC09g50583 Brassica carinata HOM05D002586 ORTHO05D007009 2.1e-88 329.7 268 60.8
Carub.0008s1458 Capsella rubella HOM05D004171 ORTHO05D004983 2.7e-88 329.3 272 61.4
unitig_699.g19211 Utricularia gibba HOM05D004171 ORTHO05D004983 3.9e-87 325.5 266 61.7
Gorai.004G029100 Gossypium raimondii HOM05D004171 ORTHO05D004983 1.1e-86 323.9 270 61.9
Gohir.A08G020900 Gossypium hirsutum HOM05D004171 ORTHO05D004983 1.5e-86 323.6 270 61.5
HPP92_012360 Vanilla planifolia HOM05D004171 ORTHO05D004983 9.7e-86 320.9 269 58.4
Aa31LG5G10160 Aethionema arabicum HOM05D002586 ORTHO05D007009 1.4e-84 317.0 272 58.8
DCAR_008697 Daucus carota HOM05D004171 ORTHO05D004983 9.0e-84 314.3 258 62.4
FAN21G0927 Fragaria x ananassa HOM05D004171 ORTHO05D004983 7.7e-83 311.2 246 64.6
CDE01G0586 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 6.7e-79 298.1 234 63.2
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 1.7e-77 293.5 260 55.4
Potri.001G408001 Populus trichocarpa HOM05D004171 ORTHO05D004983 5.3e-76 288.5 181 73.5
Os07g0559400 Oryza sativa ssp. japonica HOM05D004171 ORTHO05D004983 7.7e-75 284.6 273 52.0
CAN.G847.1 Capsicum annuum HOM05D004171 ORTHO05D004983 6.5e-74 281.6 198 70.7
Zm00001eb324170 Zea mays HOM05D004171 ORTHO05D004983 2.5e-73 279.6 264 53.0
Mapoly0102s0009 Marchantia polymorpha HOM05D004171 ORTHO05D004983 3.7e-69 265.8 277 49.5
SEGI_27365 Sequoiadendron giganteum HOM05D004171 ORTHO05D004983 1.3e-66 257.3 216 59.3
Oeu019367.1 Olea europaea HOM05D004171 ORTHO05D004983 1.9e-65 253.4 149 82.6
Nn1g03875 Nelumbo nucifera HOM05D004171 ORTHO05D004983 7.2e-65 251.5 182 70.9
CAN.G187.6 Capsicum annuum HOM05D004171 ORTHO05D004983 3.3e-62 242.7 186 66.1
SMO116G0055 Selaginella moellendorffii HOM05D004171 ORTHO05D004983 1.7e-61 240.4 235 48.9
Nn1g06780 Nelumbo nucifera HOM05D004171 ORTHO05D004983 3.8e-58 229.2 146 78.8
Pp3c3_11900 Physcomitrium patens HOM05D004171 ORTHO05D004983 4.4e-54 215.7 277 41.2
CDE12G0832 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 8.3e-53 211.5 233 48.9
Ca_22993_v3 Cicer arietinum L. HOM05D004171 ORTHO05D004983 8.3e-53 211.5 149 66.4
Gohir.D08G031500 Gossypium hirsutum HOM05D004171 ORTHO05D004983 2.7e-48 196.4 170 61.2
AagrBONN_evm.TU.Sc2ySwM_228.913 Anthoceros agrestis HOM05D004171 ORTHO05D004983 4.1e-44 182.6 205 47.3
CBR_g24077 Chara braunii HOM05D004171 ORTHO05D004983 9.5e-41 171.4 232 39.7
C02p17300 Brassica napus HOM05D004171 ORTHO05D004983 1.6e-35 154.1 132 60.6
BolC2t07830H Brassica oleracea HOM05D004171 ORTHO05D004983 4.6e-35 152.5 132 59.8
BolC2t07836H Brassica oleracea HOM05D004171 ORTHO05D004983 4.6e-35 152.5 132 59.8
BcaNung05202 Brassica carinata HOM05D004171 ORTHO05D004983 4.7e-24 115.9 109 56.0
CBR_g54085 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-21 107.8 116 44.0
CDE05G1305 Ceratophyllum demersum HOM05D004171 ORTHO05D004983 1.1e-20 104.8 174 38.5
AL9U10820 Arabidopsis lyrata HOM05D004171 ORTHO05D004983 1.2e-16 91.3 74 58.1
Actinidia37164 Actinidia chinensis HOM05D004171 ORTHO05D057920 2.6e-06 57.0 56 50.0


User provided reference genes

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