Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22349 Davidia involucrata HOM05D008268 ORTHO05D010144 1.3e-185 652.9 332 100.0
Dinv08361 Davidia involucrata HOM05D008268 ORTHO05D010144 1.9e-115 419.9 341 69.8
Actinidia09966 Actinidia chinensis HOM05D008268 ORTHO05D010144 1.4e-49 201.1 312 46.8
TAR626G0659 Trochodendron aralioides HOM05D008268 ORTHO05D010144 2.6e-48 196.8 330 44.2
Oeu061273.1 Olea europaea HOM05D008268 ORTHO05D010144 6.4e-47 192.2 358 41.3
CiPaw.11G178900 Carya illinoinensis HOM05D008268 ORTHO05D010144 3.0e-44 183.3 369 42.5
Thecc.07G068700 Theobroma cacao HOM05D008268 ORTHO05D010144 2.5e-43 180.3 346 43.1
CSS0042196 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 1.2e-42 177.9 357 42.6
CSS0041304 Camellia sinensis var. sinensis HOM05D008268 ORTHO05D010144 1.6e-42 177.6 358 42.5
Manes.15G081401 Manihot esculenta HOM05D008268 ORTHO05D010144 5.2e-41 172.6 351 43.6
Cfa020486 Carpinus fangiana HOM05D008268 ORTHO05D010144 1.5e-40 171.0 342 44.4
QL08p017136 Quercus lobata HOM05D008268 ORTHO05D010144 1.5e-40 171.0 346 41.6
Duzib170G0253 Durio zibethinus HOM05D008268 ORTHO05D010144 1.7e-39 167.5 354 39.0
Rhsim06G0192000 Rhododendron simsii HOM05D008268 ORTHO05D010144 1.3e-36 157.9 369 39.6
Prupe.4G192500 Prunus persica HOM05D008268 ORTHO05D010144 1.1e-30 138.3 369 37.1
RhsimUnG0172800 Rhododendron simsii HOM05D047612 ORTHO05D010144 1.1e-30 138.3 363 39.9
Cpa.g.sc12.16 Carica papaya HOM05D008268 ORTHO05D010144 1.2e-29 134.8 366 36.3
Phvul.005G087800 Phaseolus vulgaris HOM05D008268 ORTHO05D010144 2.1e-29 134.0 319 39.8
Lsat_1_v5_gn_0_5400 Lactuca sativa HOM05D008268 ORTHO05D010144 4.6e-29 132.9 261 41.8
Gohir.D01G057100 Gossypium hirsutum HOM05D008268 ORTHO05D010144 1.0e-28 131.7 351 35.6
Gorai.002G077500 Gossypium raimondii HOM05D008268 ORTHO05D010144 1.0e-28 131.7 351 35.6
MD11G1234600 Malus domestica HOM05D008268 ORTHO05D010144 1.7e-28 131.0 390 33.8
MD03G1216800 Malus domestica HOM05D008268 ORTHO05D010144 2.3e-28 130.6 291 37.8
Atru.chr2.2941 Acer truncatum HOM05D008268 ORTHO05D010144 3.0e-28 130.2 369 36.0
Duzib213G0412 Durio zibethinus HOM05D008268 ORTHO05D010144 5.1e-28 129.4 349 36.4
Haze_09553 Corylus avellana HOM05D008268 ORTHO05D010144 6.6e-28 129.0 337 40.4
Gohir.A01G069900 Gossypium hirsutum HOM05D008268 ORTHO05D010144 8.7e-28 128.6 352 34.4
MBI02_g38752_MAGBIO Magnolia biondii HOM05D008268 ORTHO05D010144 4.3e-27 126.3 294 37.4
MBI02_g46151_MAGBIO Magnolia biondii HOM05D008268 ORTHO05D010144 5.6e-27 125.9 294 37.8
RhsimUnG0257100 Rhododendron simsii HOM05D047612 ORTHO05D010144 7.3e-27 125.6 382 37.7
VMungo1080G0851 Vigna mungo HOM05D008268 ORTHO05D010144 1.6e-26 124.4 322 37.9
GSVIVG01014468001 Vitis vinifera HOM05D008268 ORTHO05D010144 2.8e-26 123.6 230 38.7
Nn1g06831 Nelumbo nucifera HOM05D008268 ORTHO05D010144 5.3e-25 119.4 355 33.8
Glyma.13G282800 Glycine max HOM05D008268 ORTHO05D010144 6.9e-25 119.0 350 36.6
Lalb_Chr25g0286831 Lupinus albus HOM05D008268 ORTHO05D010144 1.2e-24 118.2 358 37.2
Sabra16G0271800 Salix brachista HOM05D019858 ORTHO05D010144 1.9e-22 110.9 340 35.9
Sabra16G0276800 Salix brachista HOM05D019858 ORTHO05D010144 1.9e-22 110.9 340 35.9
Potri.001G409000 Populus trichocarpa HOM05D019858 ORTHO05D010144 4.2e-22 109.8 347 33.7
Migut.M01849 Erythranthe guttata HOM05D008268 ORTHO05D010144 9.3e-22 108.6 343 33.5
Nn1g03824 Nelumbo nucifera HOM05D008268 ORTHO05D010144 4.6e-21 106.3 283 34.3
Nitab4.5_0000297g0210 Nicotiana tabacum HOM05D015394 ORTHO05D017774 5.1e-20 102.8 386 30.8
ClCG11G018600 Citrullus lanatus HOM05D008268 ORTHO05D010144 4.3e-19 99.8 346 32.7
Peaxi162Scf01216g00063 Petunia axillaris HOM05D015394 ORTHO05D017774 7.3e-19 99.0 389 31.6
Peaxi162Scf00000g07812 Petunia axillaris HOM05D015394 ORTHO05D017774 4.8e-18 96.3 314 32.2
Potri.011G125600 Populus trichocarpa HOM05D019858 ORTHO05D010144 6.2e-18 95.9 375 32.5
SHI51816 Sapria himalayana HOM05D008268 ORTHO05D010144 1.4e-17 94.7 353 33.4
TWI38G2068 Tripterygium wilfordii HOM05D008268 ORTHO05D010144 4.0e-17 93.2 323 35.3
Nitab4.5_0001252g0050 Nicotiana tabacum HOM05D015394 ORTHO05D017774 2.6e-16 90.5 390 31.0
MELO3C018179.2 Cucumis melo HOM05D008268 ORTHO05D010144 5.8e-16 89.4 340 31.2
CsaV3_3G044260 Cucumis sativus L. HOM05D008268 ORTHO05D010144 2.9e-15 87.0 328 29.6
Sabra11G0111900 Salix brachista HOM05D019858 ORTHO05D010144 2.9e-15 87.0 352 32.1
Glyma.12G217800 Glycine max HOM05D008268 ORTHO05D010144 1.4e-14 84.7 199 38.7
Eucgr.F01065 Eucalyptus grandis HOM05D008268 ORTHO05D010144 1.2e-13 81.6 192 37.5
THA.LOC104799901 Tarenaya hassleriana HOM05D010655 ORTHO05D012747 1.6e-13 81.3 383 31.3
arahy.Tifrunner.gnm1.ann1.R70FHG Arachis hypogaea HOM05D008268 ORTHO05D010144 2.1e-13 80.9 318 31.4
arahy.Tifrunner.gnm1.ann1.Y898LB Arachis hypogaea HOM05D008268 ORTHO05D010144 3.5e-13 80.1 325 31.1
CDE02G2061 Ceratophyllum demersum HOM05D057939 ORTHO05D010144 4.6e-13 79.7 217 33.2
COL.COLO4_09500 Corchorus olitorius HOM05D008268 ORTHO05D010144 7.9e-13 79.0 156 39.7
Solyc07g063670.2 Solanum lycopersicum HOM05D015394 ORTHO05D017774 1.3e-12 78.2 366 29.5
Sed0023643 Sechium edule HOM05D008268 ORTHO05D010144 3.0e-12 77.0 301 28.6
Sopen07g031850 Solanum pennellii HOM05D015394 ORTHO05D017774 1.9e-11 74.3 363 29.8
CANSAT11G1352 Cannabis sativa HOM05D008268 ORTHO05D010144 4.3e-11 73.2 429 29.4
CAN.G162.112 Capsicum annuum HOM05D015394 ORTHO05D017774 4.3e-11 73.2 333 28.2
Psat5g247560 Pisum sativum HOM05D008268 ORTHO05D010144 5.6e-11 72.8 330 31.8
Medtr2g081240 Medicago truncatula HOM05D008268 ORTHO05D010144 1.6e-10 71.2 335 31.0
ATR1132G078 Amborella trichopoda HOM05D008268 ORTHO05D010144 2.8e-10 70.5 278 31.7
Ca_01792_v3 Cicer arietinum L. HOM05D008268 ORTHO05D010144 1.1e-09 68.6 87 51.7
Lalb_Chr20g0110041 Lupinus albus HOM05D008268 ORTHO05D010144 3.1e-09 67.0 94 46.8
PGR083G1493 Punica granatum HOM05D008268 ORTHO05D010144 4.0e-09 66.6 244 32.4
RcHm_v2.0_Chr6g0255571 Rosa chinensis HOM05D014484 ORTHO05D017021 1.5e-08 64.7 342 28.4
Lj3g0025864 Lotus japonicus HOM05D008268 ORTHO05D010144 3.4e-08 63.5 348 28.7
FAN27G0943 Fragaria x ananassa HOM05D014484 ORTHO05D017021 2.2e-07 60.8 394 25.6
PGSC0003DMG400019281 Solanum tuberosum HOM05D015394 ORTHO05D017774 3.8e-07 60.1 233 31.3
THA.LOC104809278 Tarenaya hassleriana HOM05D010655 ORTHO05D012747 8.4e-07 58.9 279 32.3
TPR.G32855 Trifolium pratense HOM05D008268 ORTHO05D010144 8.4e-07 58.9 346 27.2
Sp7g25250 Schrenkiella parvula HOM05D010655 ORTHO05D012747 1.9e-06 57.8 363 30.0
Eucgr.F01064 Eucalyptus grandis HOM05D008268 ORTHO05D010144 5.5e-06 56.2 122 37.7


User provided reference genes

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