Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22311 Davidia involucrata HOM05D007317 ORTHO05D009299 8.9e-193 676.8 346 100.0
QL08p013772 Quercus lobata HOM05D007317 ORTHO05D009299 4.2e-126 455.3 339 70.5
QL08p013454 Quercus lobata HOM05D007317 ORTHO05D009299 2.1e-125 453.0 339 70.2
TAR627G0483 Trochodendron aralioides HOM05D007317 ORTHO05D009299 9.1e-121 437.6 340 68.5
TAR627G0019 Trochodendron aralioides HOM05D007317 ORTHO05D009299 1.5e-120 436.8 338 68.6
Cfa020433 Carpinus fangiana HOM05D007317 ORTHO05D009299 2.9e-119 432.6 347 69.7
Haze_09595 Corylus avellana HOM05D007317 ORTHO05D009299 5.0e-119 431.8 347 69.5
CSS0029394 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 6.5e-119 431.4 328 72.0
CiPaw.11G183200 Carya illinoinensis HOM05D007317 ORTHO05D009299 6.5e-119 431.4 338 71.3
Manes.03G122200 Manihot esculenta HOM05D007317 ORTHO05D009299 8.5e-119 431.0 300 73.7
Lj1C863T3 Lonicera japonica HOM05D007317 ORTHO05D009299 1.1e-118 430.6 304 74.3
CSS0009056 Camellia sinensis var. sinensis HOM05D007317 ORTHO05D009299 5.5e-118 428.3 342 69.9
Potri.011G132500 Populus trichocarpa HOM05D007317 ORTHO05D009299 8.0e-117 424.5 341 66.9
Ciclev10008788m.g Citrus clementina HOM05D007317 ORTHO05D009299 8.8e-116 421.0 339 65.8
Thecc.07G054800 Theobroma cacao HOM05D007317 ORTHO05D009299 8.8e-116 421.0 323 68.4
Atru.chr2.3185 Acer truncatum HOM05D007317 ORTHO05D009299 1.5e-115 420.2 342 67.0
Actinidia09959 Actinidia chinensis HOM05D007317 ORTHO05D009299 2.0e-115 419.9 318 71.1
Hma1.2p1_2644F.1_g325960 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 2.6e-115 419.5 288 75.7
Lj3g0025188 Lotus japonicus HOM05D007317 ORTHO05D009299 3.7e-114 415.6 308 69.2
Sabra11G0119300 Salix brachista HOM05D007317 ORTHO05D009299 8.2e-114 414.5 341 65.4
Atru.chr2.3195 Acer truncatum HOM05D007317 ORTHO05D009299 1.1e-113 414.1 341 66.9
Gorai.002G082000 Gossypium raimondii HOM05D007317 ORTHO05D009299 1.4e-113 413.7 324 66.0
Duzib213G1071 Durio zibethinus HOM05D007317 ORTHO05D009299 1.2e-112 410.6 323 69.0
Gohir.D01G060600 Gossypium hirsutum HOM05D007317 ORTHO05D009299 3.5e-112 409.1 324 65.4
Gohir.A01G074100 Gossypium hirsutum HOM05D007317 ORTHO05D009299 5.9e-112 408.3 324 65.1
Nn1g03706 Nelumbo nucifera HOM05D007317 ORTHO05D009299 1.7e-111 406.8 301 70.4
Prupe.4G201600 Prunus persica HOM05D007317 ORTHO05D009299 2.9e-111 406.0 339 65.2
Medtr2g082660 Medicago truncatula HOM05D007317 ORTHO05D009299 5.0e-111 405.2 307 67.8
Ca_01757_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 8.5e-111 404.4 305 68.2
Ca_01763_v3 Cicer arietinum L. HOM05D007317 ORTHO05D009299 8.5e-111 404.4 305 68.2
Phvul.005G091100 Phaseolus vulgaris HOM05D007317 ORTHO05D009299 4.2e-110 402.1 341 63.6
Lalb_Chr22g0357071 Lupinus albus HOM05D007317 ORTHO05D009299 8.0e-109 397.9 303 67.3
PGR083G0561 Punica granatum HOM05D007317 ORTHO05D009299 1.8e-108 396.7 327 66.4
RcHm_v2.0_Chr5g0037211 Rosa chinensis HOM05D007317 ORTHO05D009299 2.3e-108 396.4 337 65.3
VMungo1080G0023 Vigna mungo HOM05D007317 ORTHO05D009299 2.3e-108 396.4 306 67.3
ClCG10G005750 Citrullus lanatus HOM05D007317 ORTHO05D009299 3.0e-108 396.0 342 62.6
Glyma.12G214800 Glycine max HOM05D007317 ORTHO05D009299 4.0e-108 395.6 324 64.8
Lsat_1_v5_gn_0_6961 Lactuca sativa HOM05D007317 ORTHO05D001968 5.2e-108 395.2 275 75.6
Aqoxy4G02123 Aquilegia oxysepala HOM05D007317 ORTHO05D009299 8.8e-108 394.4 338 62.7
Glyma.13G286800 Glycine max HOM05D007317 ORTHO05D009299 2.6e-107 392.9 344 62.5
GSVIVG01014590001 Vitis vinifera HOM05D007317 ORTHO05D009299 7.5e-107 391.3 339 63.4
Peaxi162Scf01097g00014 Petunia axillaris HOM05D007317 ORTHO05D009299 1.3e-106 390.6 339 63.4
Nitab4.5_0000749g0020 Nicotiana tabacum HOM05D007317 ORTHO05D009299 2.2e-106 389.8 342 60.5
CsaV3_3G005440 Cucumis sativus L. HOM05D007317 ORTHO05D009299 2.8e-106 389.4 310 66.5
MELO3C025426.2 Cucumis melo HOM05D007317 ORTHO05D009299 3.7e-106 389.0 298 67.4
HanXRQChr03g0077301 Helianthus annuus HOM05D007317 ORTHO05D009299 6.3e-106 388.3 286 71.0
TWI38G0523 Tripterygium wilfordii HOM05D007317 ORTHO05D009299 8.2e-106 387.9 344 62.8
FvH4_3g21740 Fragaria vesca HOM05D007317 ORTHO05D009299 1.1e-105 387.5 323 64.4
TPR.G36790 Trifolium pratense HOM05D007317 ORTHO05D009299 1.1e-105 387.5 307 66.8
Sopen12g001230 Solanum pennellii HOM05D007317 ORTHO05D009299 4.1e-105 385.6 301 66.8
Nitab4.5_0000092g0060 Nicotiana tabacum HOM05D007317 ORTHO05D009299 1.2e-104 384.0 337 60.8
PSO541G0431 Papaver somniferum HOM05D007317 ORTHO05D009299 1.6e-104 383.6 314 63.1
SalBow7G0069 Salvia bowleyana HOM05D007317 ORTHO05D009299 1.6e-104 383.6 284 70.4
MBI02_g29710_MAGBIO Magnolia biondii HOM05D007317 ORTHO05D009299 4.5e-104 382.1 342 61.4
Solyc12g005240.1 Solanum lycopersicum HOM05D007317 ORTHO05D009299 1.3e-103 380.6 301 66.1
PGSC0003DMG400021808 Solanum tuberosum HOM05D007317 ORTHO05D009299 1.7e-103 380.2 301 66.1
Psat5g249840 Pisum sativum HOM05D007317 ORTHO05D009299 1.5e-102 377.1 310 64.8
Eucgr.F00996 Eucalyptus grandis HOM05D007317 ORTHO05D009299 3.2e-102 375.9 290 67.6
CANSAT11G2557 Cannabis sativa HOM05D007317 ORTHO05D009299 2.7e-101 372.9 340 60.9
Sc03g0009140 Simmondsia chinensis HOM05D007317 ORTHO05D009299 8.0e-101 371.3 329 61.1
Migut.H01861 Erythranthe guttata HOM05D007317 ORTHO05D009299 1.5e-99 367.1 339 59.0
CAN.G262.21 Capsicum annuum HOM05D007317 ORTHO05D009299 2.0e-99 366.7 274 67.2
PSO675G5311 Papaver somniferum HOM05D007317 ORTHO05D009299 2.0e-99 366.7 273 65.9
Hma1.2p1_2644F.1_g325950 Hydrangea macrophylla HOM05D007317 ORTHO05D009299 3.4e-99 365.9 304 65.8
AUR62029234 Chenopodium quinoa HOM05D007317 ORTHO05D009299 4.8e-98 362.1 298 62.4
EL10Ac4g07985 Beta vulgaris HOM05D007317 ORTHO05D009299 6.3e-98 361.7 345 58.0
AUR62015637 Chenopodium quinoa HOM05D007317 ORTHO05D009299 8.3e-98 361.3 344 57.8
MD11G1227700 Malus domestica HOM05D007317 ORTHO05D009299 8.3e-98 361.3 330 60.3
Ah.06g183090 Amaranthus hybridus HOM05D007317 ORTHO05D009299 1.1e-97 360.9 274 66.4
Sed0024877 Sechium edule HOM05D007317 ORTHO05D009299 7.2e-94 348.2 319 58.6
COL.COLO4_09559 Corchorus olitorius HOM05D007317 ORTHO05D009299 4.7e-93 345.5 325 59.7
Sp3g18720 Schrenkiella parvula HOM05D007317 ORTHO05D009299 1.8e-92 343.6 342 55.8
Aa31LG8G7460 Aethionema arabicum HOM05D007317 ORTHO05D009299 1.2e-91 340.9 346 55.2
AL3G34590 Arabidopsis lyrata HOM05D007317 ORTHO05D009299 9.8e-91 337.8 342 55.6
AT3G20680 Arabidopsis thaliana HOM05D007317 ORTHO05D009299 1.3e-90 337.4 343 56.0
Thhalv10021080m.g Eutrema salsugineum HOM05D007317 ORTHO05D009299 1.7e-90 337.0 280 63.6
A01p34120 Brassica napus HOM05D007317 ORTHO05D009299 4.9e-90 335.5 343 57.1
BraA01t03516Z Brassica rapa HOM05D007317 ORTHO05D009299 4.9e-90 335.5 343 57.4
BcaB04g20638 Brassica carinata HOM05D007317 ORTHO05D009299 6.3e-90 335.1 344 56.1
BcaC09g49009 Brassica carinata HOM05D007317 ORTHO05D009299 3.1e-89 332.8 349 55.3
C01p43540 Brassica napus HOM05D007317 ORTHO05D009299 1.6e-88 330.5 342 55.6
BolC1t04315H Brassica oleracea HOM05D007317 ORTHO05D009299 1.6e-88 330.5 342 55.6
CARHR096490 Cardamine hirsuta HOM05D007317 ORTHO05D009299 1.6e-88 330.5 345 55.9
unitig_578.g16764 Utricularia gibba HOM05D007317 ORTHO05D009299 2.7e-88 329.7 301 57.5
THA.LOC104825404 Tarenaya hassleriana HOM05D007317 ORTHO05D009299 2.5e-86 323.2 347 54.8
Carub.0003s2066 Capsella rubella HOM05D007317 ORTHO05D009299 1.1e-81 307.8 344 52.6
SGA_v2.0_scaffold320G48570 Striga asiatica HOM05D007317 ORTHO05D009299 1.5e-78 297.4 294 58.5
Cc05_g13190 Coffea canephora HOM05D007317 ORTHO05D009299 1.1e-73 281.2 202 69.3
ATR0733G181 Amborella trichopoda HOM05D007317 ORTHO05D009299 1.4e-73 280.8 270 52.2
Lalb_Chr14g0366071 Lupinus albus HOM05D007317 ORTHO05D009299 8.6e-63 245.0 185 64.3
Zm00001eb291900 Zea mays HOM05D007317 ORTHO05D009299 4.3e-62 242.7 299 45.8
Os05g0500400 Oryza sativa ssp. japonica HOM05D007317 ORTHO05D009299 5.6e-62 242.3 312 46.5
SEGI_21971 Sequoiadendron giganteum HOM05D007317 ORTHO05D009299 3.3e-54 216.5 293 38.9
Cpa.g.sc97.77 Carica papaya HOM05D007317 ORTHO05D009299 1.1e-52 211.5 188 60.6
FAN21G2436 Fragaria x ananassa HOM05D007317 ORTHO05D009299 4.0e-52 209.5 131 77.1
PGSC0003DMG400016049 Solanum tuberosum HOM05D007317 ORTHO05D009299 5.4e-49 199.1 120 77.5
Dinv32111 Davidia involucrata HOM05D007317 ORTHO05D009299 4.6e-48 196.1 114 86.0
Pp3c9_12310 Physcomitrium patens HOM05D007317 ORTHO05D009299 2.9e-34 150.2 285 33.0
BolC3t18840H Brassica oleracea HOM05D007317 ORTHO05D009299 3.8e-34 149.8 276 40.6
BcaC01g02387 Brassica carinata HOM05D007317 ORTHO05D009299 3.0e-31 140.2 215 43.3
Mapoly0015s0049 Marchantia polymorpha HOM05D007317 ORTHO05D009299 5.1e-31 139.4 270 35.2
BcaC09g49010 Brassica carinata HOM05D007317 ORTHO05D009299 1.3e-26 124.8 135 48.1
MD03G1212500 Malus domestica HOM05D007317 ORTHO05D009299 1.9e-22 110.9 115 52.2
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 3.3e-22 110.2 261 29.9
MCO11G003 Micromonas commoda HOM05D007317 ORTHO05D009299 2.5e-17 94.0 281 27.0
Cre08.g369000 Chlamydomonas reinhardtii HOM05D007317 ORTHO05D009299 2.3e-15 87.4 280 27.5
BcaB02g11442 Brassica carinata HOM05D007317 ORTHO05D009299 1.2e-11 75.1 103 35.9


User provided reference genes

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