Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22212 Davidia involucrata HOM05D008349 ORTHO05D010116 2.7e-74 282.0 145 100.0
QL01p016614 Quercus lobata HOM05D008349 ORTHO05D010116 4.8e-23 111.7 83 66.3
Nn7g36871 Nelumbo nucifera HOM05D008349 ORTHO05D010116 2.9e-20 102.4 92 59.8
Hma1.2p1_0460F.1_g157620 Hydrangea macrophylla HOM05D008349 ORTHO05D010116 1.4e-19 100.1 89 65.2
CiPaw.09G049400 Carya illinoinensis HOM05D008349 ORTHO05D010116 7.1e-19 97.8 121 48.8
CiPaw.10G041900 Carya illinoinensis HOM05D008349 ORTHO05D010116 6.0e-18 94.7 92 53.3
QL07p011743 Quercus lobata HOM05D008349 ORTHO05D010116 7.9e-18 94.4 90 51.1
CiPaw.13G148400 Carya illinoinensis HOM05D008349 ORTHO05D010116 3.9e-17 92.0 97 51.5
Potri.009G068800 Populus trichocarpa HOM05D008349 ORTHO05D010116 3.9e-17 92.0 85 62.4
Dinv36146 Davidia involucrata HOM05D000139 ORTHO05D000103 6.7e-17 91.3 53 84.9
Potri.001G274200 Populus trichocarpa HOM05D008349 ORTHO05D010116 1.1e-16 90.5 88 60.2
Manes.08G060951 Manihot esculenta HOM05D008349 ORTHO05D010116 3.3e-16 89.0 96 54.2
Potri.016G034950 Populus trichocarpa HOM05D008349 ORTHO05D010116 7.4e-16 87.8 100 51.0
Sabra09G0051800 Salix brachista HOM05D008349 ORTHO05D010116 9.7e-16 87.4 82 62.2
Cfa009902 Carpinus fangiana HOM05D008349 ORTHO05D010116 1.3e-15 87.0 86 64.0
Manes.02G138100 Manihot esculenta HOM05D008349 ORTHO05D010116 1.6e-15 86.7 87 60.9
Haze_23263 Corylus avellana HOM05D008349 ORTHO05D010116 3.4e-13 79.0 87 60.9
Eucgr.B03753 Eucalyptus grandis HOM05D008349 ORTHO05D010116 3.4e-13 79.0 84 54.8
TAR622G0427 Trochodendron aralioides HOM05D008349 ORTHO05D010116 4.5e-13 78.6 74 56.8
TAR633G0966 Trochodendron aralioides HOM05D008349 ORTHO05D010116 4.5e-13 78.6 74 56.8
Manes.09G003300 Manihot esculenta HOM05D008349 ORTHO05D010116 8.5e-12 74.3 102 46.1
Thecc.05G124300 Theobroma cacao HOM05D008349 ORTHO05D010116 3.2e-11 72.4 98 48.0
Potri.006G036700 Populus trichocarpa HOM05D008349 ORTHO05D010116 4.2e-11 72.0 96 47.9
Cfa019988 Carpinus fangiana HOM05D008349 ORTHO05D010116 5.5e-11 71.6 84 48.8
arahy.Tifrunner.gnm1.ann1.K04G9P Arachis hypogaea HOM05D012946 ORTHO05D010116 1.6e-10 70.1 80 52.5
arahy.Tifrunner.gnm1.ann1.Y676PW Arachis hypogaea HOM05D012946 ORTHO05D010116 1.6e-10 70.1 80 52.5
COL.COLO4_23432 Corchorus olitorius HOM05D008349 ORTHO05D010116 2.7e-10 69.3 106 44.3
Lj6g0008281 Lotus japonicus HOM05D012946 ORTHO05D010116 1.4e-09 67.0 83 44.6
Prupe.7G031000 Prunus persica HOM05D008349 ORTHO05D010116 2.3e-09 66.2 94 42.6
Phvul.006G016000 Phaseolus vulgaris HOM05D012946 ORTHO05D010116 1.5e-08 63.5 77 50.6
Glyma.14G036500 Glycine max HOM05D012946 ORTHO05D010116 2.5e-08 62.8 76 50.0
Aqoxy2G00445 Aquilegia oxysepala HOM05D008349 ORTHO05D010116 3.3e-08 62.4 105 43.8
Glyma.02G278000 Glycine max HOM05D012946 ORTHO05D010116 1.7e-07 60.1 82 46.3
TAR636G0649 Trochodendron aralioides HOM05D008349 ORTHO05D010116 2.8e-07 59.3 74 51.4
EL10Ac3g07259 Beta vulgaris HOM05D008349 ORTHO05D010116 4.8e-07 58.5 99 39.4
Glyma.20G042900 Glycine max HOM05D012946 ORTHO05D010116 6.3e-07 58.2 82 42.7
Thecc.09G245500 Theobroma cacao HOM05D008349 ORTHO05D010116 6.3e-07 58.2 65 50.8
Medtr5g089080 Medicago truncatula HOM05D012946 ORTHO05D010116 1.8e-06 56.6 84 44.0


User provided reference genes

Program Settings