Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22210 Davidia involucrata HOM05D007094 ORTHO05D008264 2.4e-60 235.3 120 100.0
CiPaw.14G110600 Carya illinoinensis HOM05D007094 ORTHO05D008264 1.0e-42 176.8 120 72.5
Prupe.6G146500 Prunus persica HOM05D007094 ORTHO05D008264 1.1e-41 173.3 115 73.0
RcHm_v2.0_Chr5g0048901 Rosa chinensis HOM05D007094 ORTHO05D008264 1.8e-39 166.0 115 72.2
Haze_23270 Corylus avellana HOM05D007094 ORTHO05D008264 3.0e-39 165.2 121 68.6
QL01p016497 Quercus lobata HOM05D007094 ORTHO05D008264 3.0e-39 165.2 116 72.4
QL01p024141 Quercus lobata HOM05D007094 ORTHO05D008264 3.0e-39 165.2 116 72.4
Cfa003293 Carpinus fangiana HOM05D007094 ORTHO05D008264 6.7e-39 164.1 119 69.7
GSVIVG01037355001 Vitis vinifera HOM05D007094 ORTHO05D008264 2.0e-38 162.5 120 70.0
Rhsim13G0205900 Rhododendron simsii HOM05D007094 ORTHO05D008264 9.7e-38 160.2 120 66.7
FvH4_3g26230 Fragaria vesca HOM05D007094 ORTHO05D008264 1.7e-37 159.5 115 68.7
FAN11G3047 Fragaria x ananassa HOM05D007094 ORTHO05D008264 1.7e-37 159.5 115 68.7
FAN25G3244 Fragaria x ananassa HOM05D007094 ORTHO05D008264 2.2e-37 159.1 115 67.8
MD11G1174500 Malus domestica HOM05D007094 ORTHO05D008264 2.8e-37 158.7 115 67.0
Duzib168G1032 Durio zibethinus HOM05D007094 ORTHO05D008264 4.8e-37 157.9 114 68.4
Gohir.A09G108300 Gossypium hirsutum HOM05D007094 ORTHO05D008264 8.2e-37 157.1 113 68.1
Manes.01G177900 Manihot esculenta HOM05D007094 ORTHO05D008264 1.4e-36 156.4 117 68.4
Thecc.09G254700 Theobroma cacao HOM05D007094 ORTHO05D008264 1.4e-36 156.4 114 68.4
Glyma.02G277800 Glycine max HOM05D007094 ORTHO05D008264 2.6e-35 152.1 114 68.4
Ciclev10017201m.g Citrus clementina HOM05D007094 ORTHO05D008264 1.7e-34 149.4 121 65.3
Glyma.14G036700 Glycine max HOM05D007094 ORTHO05D008264 2.2e-34 149.1 114 66.7
Gorai.006G122200 Gossypium raimondii HOM05D007094 ORTHO05D008264 6.5e-34 147.5 114 65.8
Duzib170G0850 Durio zibethinus HOM05D007094 ORTHO05D008264 8.5e-34 147.1 114 64.0
PSO339G5619 Papaver somniferum HOM05D007094 ORTHO05D008264 1.4e-33 146.4 118 63.6
Migut.D00679 Erythranthe guttata HOM05D007094 ORTHO05D008264 2.5e-33 145.6 116 58.6
Gohir.D09G105400 Gossypium hirsutum HOM05D007094 ORTHO05D008264 2.5e-33 145.6 114 64.9
Lalb_Chr17g0347841 Lupinus albus HOM05D007094 ORTHO05D008264 2.5e-33 145.6 118 66.1
Nn7g36894 Nelumbo nucifera HOM05D007094 ORTHO05D008264 2.5e-33 145.6 121 62.8
MSTRG.21339 Avicennia marina HOM05D007094 ORTHO05D008264 5.5e-33 144.4 117 64.1
Phvul.008G203100 Phaseolus vulgaris HOM05D007094 ORTHO05D008264 1.2e-32 143.3 114 64.9
Lalb_Chr04g0249301 Lupinus albus HOM05D007094 ORTHO05D008264 2.7e-32 142.1 116 66.4
PSO384G3224 Papaver somniferum HOM05D007094 ORTHO05D008264 4.7e-32 141.4 118 60.2
Cpa.g.sc743.4 Carica papaya HOM05D007094 ORTHO05D008264 1.0e-31 140.2 121 62.8
Duzib150G1213 Durio zibethinus HOM05D007094 ORTHO05D008264 1.0e-31 140.2 113 61.9
Atru.chr3.2855 Acer truncatum HOM05D007094 ORTHO05D008264 1.8e-31 139.4 117 63.2
Atru.chr3.2857 Acer truncatum HOM05D007094 ORTHO05D008264 1.8e-31 139.4 117 63.2
Aqoxy2G00509 Aquilegia oxysepala HOM05D007094 ORTHO05D008264 2.3e-31 139.0 112 60.7
TPR.G16423 Trifolium pratense HOM05D007094 ORTHO05D008264 2.3e-31 139.0 118 63.6
LjContig00564g0008375 Lotus japonicus HOM05D007094 ORTHO05D008264 3.0e-31 138.7 115 63.5
TAR633G0748 Trochodendron aralioides HOM05D007094 ORTHO05D008264 6.7e-31 137.5 98 68.4
Medtr5g089030 Medicago truncatula HOM05D007094 ORTHO05D008264 8.8e-31 137.1 121 62.8
MSTRG.21340 Avicennia marina HOM05D007094 ORTHO05D008264 2.6e-30 135.6 116 62.1
Psat0s2305g0120 Pisum sativum HOM05D007094 ORTHO05D008264 2.6e-30 135.6 118 60.2
PGR119G0280 Punica granatum HOM05D007094 ORTHO05D008264 2.6e-30 135.6 117 59.8
Sed0011068 Sechium edule HOM05D007094 ORTHO05D008264 3.3e-30 135.2 118 63.6
CANSAT54G2518 Cannabis sativa HOM05D007094 ORTHO05D008264 4.4e-30 134.8 118 57.6
FAN21G1281 Fragaria x ananassa HOM05D007094 ORTHO05D008264 5.7e-30 134.4 98 67.3
Sc16g0010910 Simmondsia chinensis HOM05D007094 ORTHO05D008264 7.4e-30 134.0 113 60.2
Actinidia06990 Actinidia chinensis HOM05D007094 ORTHO05D008264 9.7e-30 133.7 114 60.5
MBI13_g09208_MAGBIO Magnolia biondii HOM05D007094 ORTHO05D008264 1.7e-29 132.9 114 57.9
arahy.Tifrunner.gnm1.ann1.S7BBNZ Arachis hypogaea HOM05D007094 ORTHO05D008264 2.8e-29 132.1 117 63.2
arahy.Tifrunner.gnm1.ann1.WS3KYJ Arachis hypogaea HOM05D007094 ORTHO05D008264 2.8e-29 132.1 117 63.2
COL.COLO4_24933 Corchorus olitorius HOM05D007094 ORTHO05D008264 2.8e-29 132.1 119 58.8
VMungo0647G0750 Vigna mungo HOM05D007094 ORTHO05D008264 6.3e-29 131.0 131 55.0
TWI31G1326 Tripterygium wilfordii HOM05D007094 ORTHO05D008264 1.4e-28 129.8 116 56.9
ClCG02G022690 Citrullus lanatus HOM05D007094 ORTHO05D008264 2.4e-28 129.0 122 59.8
Potri.009G069000 Populus trichocarpa HOM05D007094 ORTHO05D008264 4.1e-28 128.3 131 56.5
ATR0307G079 Amborella trichopoda HOM05D007094 ORTHO05D008264 7.0e-28 127.5 105 57.1
Oeu001497.1 Olea europaea HOM05D007094 ORTHO05D008264 7.0e-28 127.5 114 63.2
arahy.Tifrunner.gnm1.ann1.MLT6HR Arachis hypogaea HOM05D007094 ORTHO05D008264 1.2e-27 126.7 117 60.7
THA.LOC104811204 Tarenaya hassleriana HOM05D007094 ORTHO05D008264 2.0e-27 125.9 114 57.9
Lj1A303G25 Lonicera japonica HOM05D007094 ORTHO05D008264 2.6e-27 125.6 126 54.8
Potri.001G274400 Populus trichocarpa HOM05D007094 ORTHO05D008264 7.7e-27 124.0 115 56.5
MELO3C014546.2 Cucumis melo HOM05D007094 ORTHO05D008264 1.3e-26 123.2 98 64.3
Lsat_1_v5_gn_2_26200 Lactuca sativa HOM05D007094 ORTHO05D008264 1.7e-26 122.9 114 57.0
DCAR_029904 Daucus carota HOM05D007094 ORTHO05D008264 2.2e-26 122.5 95 63.2
Sabra16G0168900 Salix brachista HOM05D007094 ORTHO05D008264 1.1e-25 120.2 133 51.1
Carub.0006s1075 Capsella rubella HOM05D007094 ORTHO05D008264 1.5e-25 119.8 115 57.4
Cc01_g06340 Coffea canephora HOM05D007094 ORTHO05D008264 1.5e-25 119.8 114 58.8
Lj1A294T17 Lonicera japonica HOM05D007094 ORTHO05D008264 1.5e-25 119.8 74 73.0
SGA_v2.0_scaffold29G12215 Striga asiatica HOM05D007094 ORTHO05D008264 1.5e-25 119.8 99 57.6
AT5G12240 Arabidopsis thaliana HOM05D007094 ORTHO05D008264 3.2e-25 118.6 115 56.5
CDE04G2345 Ceratophyllum demersum HOM05D007094 ORTHO05D008264 3.2e-25 118.6 118 53.4
Ah.04g159660 Amaranthus hybridus HOM05D007094 ORTHO05D008264 7.2e-25 117.5 117 53.0
ECA238G4818 Erigeron canadensis HOM05D007094 ORTHO05D008264 7.2e-25 117.5 114 54.4
HPP92_015618 Vanilla planifolia HOM05D007094 ORTHO05D008264 1.6e-24 116.3 114 50.9
PGSC0003DMG402031249 Solanum tuberosum HOM05D007094 ORTHO05D008264 3.6e-24 115.2 117 53.8
Aa31LG3G14990 Aethionema arabicum HOM05D007094 ORTHO05D008264 4.7e-24 114.8 114 55.3
Sopen11g024820 Solanum pennellii HOM05D007094 ORTHO05D008264 4.7e-24 114.8 117 53.8
unitig_52.g16873 Utricularia gibba HOM05D007094 ORTHO05D008264 1.8e-23 112.8 116 49.1
Solyc11g065080.2 Solanum lycopersicum HOM05D007094 ORTHO05D008264 2.3e-23 112.5 114 54.4
CARHR200870 Cardamine hirsuta HOM05D007094 ORTHO05D008264 8.8e-23 110.5 112 54.5
Hma1.2p1_0460F.1_g157640 Hydrangea macrophylla HOM05D007094 ORTHO05D008264 8.8e-23 110.5 110 60.0
C03p06400 Brassica napus HOM05D007094 ORTHO05D008264 1.2e-22 110.2 118 53.4
EL10Ac4g10089 Beta vulgaris HOM05D007094 ORTHO05D008264 2.0e-22 109.4 118 51.7
BcaB01g05415 Brassica carinata HOM05D007094 ORTHO05D008264 2.0e-22 109.4 119 55.5
A03p05490 Brassica napus HOM05D007094 ORTHO05D008264 2.0e-22 109.4 118 53.4
BraA03t09887Z Brassica rapa HOM05D007094 ORTHO05D008264 2.0e-22 109.4 118 53.4
vmacro08628 Vaccinium macrocarpon HOM05D007094 ORTHO05D008264 3.3e-22 108.6 77 67.5
CAN.G1167.7 Capsicum annuum HOM05D007094 ORTHO05D008264 1.3e-21 106.7 114 52.6
HanXRQChr12g0381391 Helianthus annuus HOM05D007094 ORTHO05D008264 2.4e-20 102.4 99 54.5
Zm00001eb110280 Zea mays HOM05D007094 ORTHO05D008264 1.6e-19 99.8 116 48.3
BolC9t59296H Brassica oleracea HOM05D007094 ORTHO05D008264 2.2e-18 95.9 123 47.2
Peaxi162Scf00032g02018 Petunia axillaris HOM05D021104 ORTHO05D008264 6.5e-18 94.4 79 58.2
Peaxi162Scf00004g04119 Petunia axillaris HOM05D007094 ORTHO05D008264 1.9e-17 92.8 89 58.4
Nitab4.5_0000390g0140 Nicotiana tabacum HOM05D021104 ORTHO05D008264 4.2e-17 91.7 79 57.0
Nitab4.5_0004018g0040 Nicotiana tabacum HOM05D007094 ORTHO05D008264 7.2e-17 90.9 101 51.5
Eucgr.J00674 Eucalyptus grandis HOM05D007094 ORTHO05D008264 1.2e-16 90.1 100 55.0
Nitab4.5_0006052g0020 Nicotiana tabacum HOM05D021104 ORTHO05D008264 1.6e-16 89.7 78 56.4
Zm00001eb329040 Zea mays HOM05D007094 ORTHO05D008264 2.1e-16 89.4 118 44.1
Hund21962 Selenicereus undatus HOM05D007094 ORTHO05D008264 4.7e-16 88.2 202 34.2
Haze_25678 Corylus avellana HOM05D007094 ORTHO05D008264 1.4e-15 86.7 110 48.2
PGSC0003DMG400004429 Solanum tuberosum HOM05D021104 ORTHO05D008264 6.8e-15 84.3 79 51.9
Oeu032576.1 Olea europaea HOM05D007094 ORTHO05D008264 1.2e-14 83.6 53 73.6
Solyc01g008680.4 Solanum lycopersicum HOM05D021104 ORTHO05D008264 1.7e-13 79.7 79 51.9
Sopen01g004200 Solanum pennellii HOM05D021104 ORTHO05D008264 1.7e-13 79.7 79 51.9
DCAR_029979 Daucus carota HOM05D007094 ORTHO05D008264 1.4e-12 76.6 64 57.8
BolC3t13146H Brassica oleracea HOM05D000282 ORTHO05D000272 1.8e-12 76.3 84 48.8
BraA10t44623Z Brassica rapa HOM05D007094 ORTHO05D008264 2.4e-12 75.9 115 42.6
A10p25550 Brassica napus HOM05D007094 ORTHO05D008264 9.1e-12 73.9 114 41.2
CDE02G1487 Ceratophyllum demersum HOM05D004500 ORTHO05D028702 1.2e-11 73.6 45 73.3
Sed0018655 Sechium edule HOM05D007094 ORTHO05D008264 7.7e-11 70.9 115 47.8
Os07g0641800 Oryza sativa ssp. japonica HOM05D007094 ORTHO05D008264 1.5e-09 66.6 52 57.7
SalBow6G5897 Salvia bowleyana HOM05D007094 ORTHO05D008264 2.3e-07 59.3 48 62.5
AagrBONN_evm.TU.Sc2ySwM_368.1089 Anthoceros agrestis HOM05D007094 ORTHO05D008264 4.0e-07 58.5 124 36.3
C09p64630 Brassica napus HOM05D007094 ORTHO05D008264 1.2e-06 57.0 102 42.2
Pp3c24_4990 Physcomitrium patens HOM05D007094 ORTHO05D008264 2.0e-06 56.2 117 35.0


User provided reference genes

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