Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22181 Davidia involucrata HOM05D000112 ORTHO05D184583 6.9e-36 153.3 70 100.0
TPR.G5797 Trifolium pratense HOM05D002417 ORTHO05D002589 8.2e-13 76.6 65 61.5
Dinv37506 Davidia involucrata HOM05D000112 ORTHO05D000564 2.7e-08 61.6 30 96.7
Duzib084G1181 Durio zibethinus HOM05D000112 ORTHO05D000564 2.7e-08 61.6 30 96.7
COL.COLO4_10736 Corchorus olitorius HOM05D000112 ORTHO05D000564 3.6e-08 61.2 30 93.3
Manes.02G007600 Manihot esculenta HOM05D000112 ORTHO05D000564 4.7e-08 60.8 30 90.0
Sabra03G0102900 Salix brachista HOM05D000112 ORTHO05D000564 4.7e-08 60.8 30 90.0
Duzib068G0078 Durio zibethinus HOM05D000112 ORTHO05D000564 6.1e-08 60.5 30 93.3
Aqoxy7G00065 Aquilegia oxysepala HOM05D000112 ORTHO05D000564 1.0e-07 59.7 30 93.3
DCAR_025262 Daucus carota HOM05D000112 ORTHO05D000564 1.0e-07 59.7 65 50.8
Thecc.03G301500 Theobroma cacao HOM05D000112 ORTHO05D000564 1.0e-07 59.7 30 93.3
Gohir.A11G025500 Gossypium hirsutum HOM05D000112 ORTHO05D000564 1.4e-07 59.3 30 93.3
Gohir.D11G025200 Gossypium hirsutum HOM05D000112 ORTHO05D000564 1.4e-07 59.3 30 93.3
Gorai.007G026900 Gossypium raimondii HOM05D000112 ORTHO05D000564 1.4e-07 59.3 30 93.3
Lj2A162T43 Lonicera japonica HOM05D000112 ORTHO05D000564 1.8e-07 58.9 30 93.3
Potri.001G088600 Populus trichocarpa HOM05D000112 ORTHO05D000564 1.8e-07 58.9 30 86.7
Sabra01G0064800 Salix brachista HOM05D000112 ORTHO05D000564 1.8e-07 58.9 30 86.7
Cpa.g.sc15.1 Carica papaya HOM05D000112 ORTHO05D000564 3.0e-07 58.2 30 90.0
Dinv38816 Davidia involucrata HOM05D000112 ORTHO05D000564 3.0e-07 58.2 30 90.0
Prupe.2G190400 Prunus persica HOM05D000112 ORTHO05D000564 3.0e-07 58.2 30 90.0
Dinv34218 Davidia involucrata HOM05D000112 ORTHO05D000564 4.0e-07 57.8 30 90.0
Gohir.A02G099200 Gossypium hirsutum HOM05D000112 ORTHO05D000564 4.0e-07 57.8 30 90.0
Gohir.D03G084700 Gossypium hirsutum HOM05D000112 ORTHO05D000564 4.0e-07 57.8 30 90.0
Gorai.003G078000 Gossypium raimondii HOM05D000112 ORTHO05D000564 4.0e-07 57.8 30 90.0
GSVIVG01019566001 Vitis vinifera HOM05D000112 ORTHO05D000564 4.0e-07 57.8 29 89.7
QL02p029794 Quercus lobata HOM05D000112 ORTHO05D000564 5.2e-07 57.4 30 83.3
TAR375G0152 Trochodendron aralioides HOM05D000112 ORTHO05D000564 5.2e-07 57.4 30 90.0
Lsat_1_v5_gn_6_84121 Lactuca sativa HOM05D000112 ORTHO05D000564 8.8e-07 56.6 30 90.0
Lalb_Chr04g0261481 Lupinus albus HOM05D000112 ORTHO05D000564 1.2e-06 56.2 30 86.7
Lalb_Chr18g0044561 Lupinus albus HOM05D000112 ORTHO05D000564 1.2e-06 56.2 30 86.7
Potri.003G142100 Populus trichocarpa HOM05D000112 ORTHO05D000564 1.2e-06 56.2 30 83.3
ECA246G3982 Erigeron canadensis HOM05D000112 ORTHO05D000564 1.5e-06 55.8 30 86.7
Lsat_1_v5_gn_3_11900 Lactuca sativa HOM05D000112 ORTHO05D000564 1.5e-06 55.8 30 86.7
PSO135G0674 Papaver somniferum HOM05D000112 ORTHO05D000564 1.5e-06 55.8 30 86.7
PSO384G2500 Papaver somniferum HOM05D000112 ORTHO05D000564 1.5e-06 55.8 30 86.7
MSTRG.17353 Avicennia marina HOM05D000112 ORTHO05D000564 2.0e-06 55.5 30 86.7
Cpa.g.sc96.40 Carica papaya HOM05D000112 ORTHO05D000564 2.0e-06 55.5 30 86.7
Dinv32602 Davidia involucrata HOM05D000112 ORTHO05D000564 2.0e-06 55.5 30 86.7
Gohir.D07G142100 Gossypium hirsutum HOM05D000112 ORTHO05D000564 2.0e-06 55.5 30 80.0
Gorai.001G153900 Gossypium raimondii HOM05D000112 ORTHO05D000564 2.0e-06 55.5 30 80.0
Hma1.2p1_0440F.1_g153510 Hydrangea macrophylla HOM05D000112 ORTHO05D000564 2.0e-06 55.5 30 80.0
Lj9C600T2 Lonicera japonica HOM05D000112 ORTHO05D000564 2.0e-06 55.5 30 86.7
TAR629G0258 Trochodendron aralioides HOM05D000112 ORTHO05D000564 2.0e-06 55.5 30 86.7
vmacro12665 Vaccinium macrocarpon HOM05D000112 ORTHO05D000564 2.0e-06 55.5 30 83.3
Atru.chr9.1935 Acer truncatum HOM05D000112 ORTHO05D000564 2.6e-06 55.1 30 83.3
Cfa011976 Carpinus fangiana HOM05D000112 ORTHO05D000564 2.6e-06 55.1 30 80.0
Eucgr.D01764 Eucalyptus grandis HOM05D000112 ORTHO05D000564 2.6e-06 55.1 30 83.3
MD07G1152100 Malus domestica HOM05D000112 ORTHO05D000564 2.6e-06 55.1 30 83.3
arahy.Tifrunner.gnm1.ann1.WDRD4S Arachis hypogaea HOM05D000112 ORTHO05D000564 3.3e-06 54.7 30 86.7
arahy.Tifrunner.gnm1.ann1.YET430 Arachis hypogaea HOM05D000112 ORTHO05D000564 3.3e-06 54.7 30 86.7
CANSAT21G2032 Cannabis sativa HOM05D000112 ORTHO05D000564 3.3e-06 54.7 30 80.0
COL.COLO4_06271 Corchorus olitorius HOM05D000112 ORTHO05D000564 3.3e-06 54.7 30 80.0
Duzib138G1864 Durio zibethinus HOM05D000112 ORTHO05D000564 3.3e-06 54.7 30 80.0
Hma1.2p1_2538F.1_g324120 Hydrangea macrophylla HOM05D000112 ORTHO05D000564 3.3e-06 54.7 30 86.7
TAR374G0857 Trochodendron aralioides HOM05D000112 ORTHO05D000564 3.3e-06 54.7 30 86.7
Lalb_Chr15g0076331 Lupinus albus HOM05D000112 ORTHO05D000564 4.4e-06 54.3 30 83.3
SGA_v2.0_scaffold96G29035 Striga asiatica HOM05D000112 ORTHO05D000564 4.4e-06 54.3 30 83.3
Ciclev10019131m.g Citrus clementina HOM05D000112 ORTHO05D000564 5.7e-06 53.9 30 83.3
DCAR_006517 Daucus carota HOM05D000112 ORTHO05D000564 5.7e-06 53.9 29 82.8
Eucgr.E00888 Eucalyptus grandis HOM05D000112 ORTHO05D000564 5.7e-06 53.9 30 83.3
Lalb_Chr01g0022611 Lupinus albus HOM05D000112 ORTHO05D000564 5.7e-06 53.9 30 76.7
QL08p045675 Quercus lobata HOM05D000112 ORTHO05D000564 5.7e-06 53.9 30 83.3
SalBow3G0322 Salvia bowleyana HOM05D000112 ORTHO05D000564 5.7e-06 53.9 29 86.2
SGA_v2.0_scaffold111G31395 Striga asiatica HOM05D000112 ORTHO05D000564 5.7e-06 53.9 30 83.3
Duzib133G1098 Durio zibethinus HOM05D000112 ORTHO05D000564 7.5e-06 53.5 30 80.0
MD01G1083400 Malus domestica HOM05D000112 ORTHO05D000564 7.5e-06 53.5 30 83.3
Nn1g00275 Nelumbo nucifera HOM05D000112 ORTHO05D000564 7.5e-06 53.5 31 83.9
Peaxi162Scf00345g00027 Petunia axillaris HOM05D000112 ORTHO05D000564 7.5e-06 53.5 29 82.8
Potri.002G172800 Populus trichocarpa HOM05D000112 ORTHO05D000564 9.7e-06 53.1 30 83.3
Potri.014G100100 Populus trichocarpa HOM05D000112 ORTHO05D000564 9.7e-06 53.1 30 83.3
PGR031G2958 Punica granatum HOM05D000112 ORTHO05D000564 9.7e-06 53.1 30 80.0
Sabra14G0073500 Salix brachista HOM05D000112 ORTHO05D000564 9.7e-06 53.1 30 80.0
SalBow1G6668 Salvia bowleyana HOM05D000112 ORTHO05D000564 9.7e-06 53.1 30 80.0
SalBow1G7672 Salvia bowleyana HOM05D000112 ORTHO05D000564 9.7e-06 53.1 30 80.0
Solyc08g008380.4 Solanum lycopersicum HOM05D000112 ORTHO05D000564 9.7e-06 53.1 30 83.3
Sopen08g004260 Solanum pennellii HOM05D000112 ORTHO05D000564 9.7e-06 53.1 30 83.3
SGA_v2.0_scaffold89G27437 Striga asiatica HOM05D000112 ORTHO05D000564 9.7e-06 53.1 30 80.0


User provided reference genes

Program Settings