Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 5.9e-79 297.4 139 100.0
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 8.8e-75 283.5 133 100.0
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 8.8e-75 283.5 133 100.0
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 6.2e-44 181.0 135 68.1
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 6.8e-43 177.6 136 68.4
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 3.0e-38 162.2 135 65.2
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 4.7e-36 154.8 135 63.7
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 9.8e-34 147.1 135 60.0
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 1.3e-33 146.7 133 60.2
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 3.7e-33 145.2 134 59.7
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 1.3e-30 136.7 128 58.6
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 1.1e-29 133.7 134 53.7
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 1.9e-29 132.9 134 55.2
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 7.3e-29 131.0 129 58.1
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 1.2e-28 130.2 135 56.3
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 3.6e-28 128.6 140 52.1
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 6.2e-28 127.9 135 56.3
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 8.1e-28 127.5 134 51.5
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 3.1e-27 125.6 129 58.1
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 1.3e-25 120.2 130 50.8
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 2.2e-25 119.4 133 51.9
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 2.2e-25 119.4 133 51.9
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 4.9e-25 118.2 135 51.1
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 6.4e-25 117.9 131 53.4
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 1.9e-24 116.3 133 51.9
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 3.2e-24 115.5 134 50.7
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 2.1e-23 112.8 134 50.0
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 3.5e-23 112.1 130 46.9
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 3.5e-23 112.1 128 47.7
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 1.3e-22 110.2 127 54.3
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 3.9e-22 108.6 98 62.2
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 3.9e-22 108.6 97 66.0
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 1.1e-21 107.1 100 57.0
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 3.3e-21 105.5 134 47.8
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 9.6e-21 104.0 99 58.6
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 4.7e-20 101.7 133 45.9
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 2.4e-19 99.4 127 48.0
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 6.8e-19 97.8 64 75.0
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 6.8e-19 97.8 133 41.4
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 3.4e-18 95.5 60 75.0
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 4.4e-18 95.1 133 40.6
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 4.4e-18 95.1 133 40.6
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 1.7e-17 93.2 126 48.4
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 1.7e-17 93.2 86 58.1
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 2.9e-17 92.4 61 73.8
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 2.9e-17 92.4 107 49.5
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 3.8e-17 92.0 130 44.6
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 8.4e-17 90.9 63 65.1
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 1.4e-16 90.1 61 72.1
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 2.4e-16 89.4 134 43.3
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 3.2e-16 89.0 134 44.0
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 3.2e-16 89.0 64 67.2
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 3.2e-16 89.0 61 70.5
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 3.2e-16 89.0 62 67.7
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 4.2e-16 88.6 62 67.7
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 7.1e-16 87.8 105 53.3
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 9.3e-16 87.4 62 67.7
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 2.7e-15 85.9 110 51.8
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 2.7e-15 85.9 105 48.6
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 1.7e-14 83.2 56 66.1
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 2.3e-14 82.8 135 41.5
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 3.0e-14 82.4 53 73.6
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 3.0e-14 82.4 53 73.6
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 3.0e-14 82.4 76 60.5
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 3.9e-14 82.0 129 41.1
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 8.7e-14 80.9 53 71.7
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 1.5e-13 80.1 56 66.1
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 2.5e-13 79.3 107 45.8
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 2.5e-13 79.3 106 49.1
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 2.5e-13 79.3 102 50.0
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 3.3e-13 79.0 57 64.9
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 1.3e-12 77.0 60 61.7
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 1.3e-12 77.0 60 61.7
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 1.6e-12 76.6 60 61.7
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 1.4e-11 73.6 53 67.9
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 5.3e-11 71.6 101 46.5
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 9.0e-11 70.9 44 75.0
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 1.2e-10 70.5 60 60.0
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 1.2e-10 70.5 58 55.2
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 1.5e-10 70.1 72 52.8
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 7.6e-10 67.8 131 33.6
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 3.8e-09 65.5 55 63.6
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 4.9e-09 65.1 56 58.9
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 4.9e-09 65.1 56 58.9
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 1.1e-08 63.9 121 38.0
Oeu060513.1 Olea europaea HOM05D006568 ORTHO05D008342 5.4e-08 61.6 47 59.6
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 1.6e-07 60.1 52 57.7
Oeu041156.1 Olea europaea HOM05D006568 ORTHO05D008342 6.0e-07 58.2 75 53.3
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 1.3e-06 57.0 51 56.9
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 2.3e-06 56.2 86 46.5
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 3.9e-06 55.5 79 43.0
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 3.9e-06 55.5 60 46.7
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 6.6e-06 54.7 73 49.3
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 8.7e-06 54.3 125 30.4


User provided reference genes

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