Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 3.5e-226 788.1 443 100.0
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 6.0e-194 681.0 384 100.0
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 6.0e-194 681.0 384 100.0
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 7.5e-144 514.6 469 62.9
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 3.4e-136 489.2 462 60.8
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 2.4e-126 456.4 455 58.7
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 2.4e-126 456.4 465 57.8
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 1.7e-124 450.3 453 58.9
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 1.7e-124 450.3 463 57.0
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 1.5e-123 447.2 438 58.9
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 1.9e-123 446.8 465 57.2
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 2.5e-123 446.4 443 58.7
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 4.3e-123 445.7 515 53.4
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 4.3e-123 445.7 427 60.9
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 5.6e-123 445.3 438 58.7
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 7.3e-123 444.9 450 57.8
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 7.3e-123 444.9 438 58.7
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 9.5e-123 444.5 462 55.8
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 1.6e-122 443.7 479 56.2
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 2.1e-122 443.4 454 57.3
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 2.8e-122 443.0 505 54.3
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 3.6e-122 442.6 464 56.2
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 1.1e-121 441.0 463 56.4
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 3.1e-121 439.5 464 56.7
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 5.2e-121 438.7 462 57.6
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 1.2e-120 437.6 458 56.8
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 1.2e-120 437.6 462 55.0
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 1.2e-120 437.6 438 58.9
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 2.0e-120 436.8 486 54.5
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 2.6e-120 436.4 465 56.6
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 3.4e-120 436.0 465 55.5
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 7.5e-120 434.9 449 55.2
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 7.5e-120 434.9 458 55.7
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 1.7e-119 433.7 457 54.7
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 2.2e-119 433.3 436 58.3
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 2.2e-119 433.3 473 53.9
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 2.9e-119 433.0 436 58.3
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 3.7e-119 432.6 446 55.6
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 3.7e-119 432.6 450 54.9
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 6.4e-119 431.8 470 54.7
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 6.4e-119 431.8 426 58.7
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 1.9e-118 430.3 487 53.2
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 4.1e-118 429.1 439 58.1
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 1.3e-116 424.1 450 53.6
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 3.9e-116 422.5 457 56.0
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 1.5e-115 420.6 438 56.6
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 1.9e-115 420.2 458 54.6
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 2.5e-115 419.9 465 54.0
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 3.3e-115 419.5 450 55.6
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 4.3e-115 419.1 454 55.3
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 2.8e-114 416.4 438 56.6
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 4.7e-114 415.6 455 54.9
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 1.1e-113 414.5 447 54.8
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 1.1e-113 414.5 433 57.0
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 3.4e-112 409.5 444 54.3
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 9.9e-112 407.9 442 54.3
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 3.7e-111 406.0 464 53.2
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 1.4e-110 404.1 448 53.3
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 4.1e-110 402.5 455 54.9
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 1.6e-109 400.6 406 57.9
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 2.7e-109 399.8 405 57.8
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 7.8e-109 398.3 441 53.7
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 8.6e-108 394.8 464 50.9
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 4.3e-107 392.5 449 53.0
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 9.6e-107 391.3 342 65.2
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 4.7e-106 389.0 412 54.9
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 2.4e-105 386.7 460 51.5
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 9.9e-104 381.3 443 53.0
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 8.4e-103 378.3 462 51.7
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 4.2e-102 375.9 458 49.6
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 2.1e-101 373.6 468 49.1
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 7.3e-99 365.2 454 50.2
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 7.3e-99 365.2 430 51.6
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 3.6e-98 362.8 429 52.7
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 5.3e-97 359.0 464 48.7
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 2.9e-95 353.2 451 49.0
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 3.8e-95 352.8 439 49.7
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 3.8e-95 352.8 412 52.7
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 4.2e-94 349.4 440 51.8
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 7.1e-94 348.6 402 53.5
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 1.7e-92 344.0 409 50.9
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 8.7e-92 341.7 441 49.2
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 3.6e-90 336.3 389 51.7
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 2.6e-88 330.1 396 49.5
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 7.6e-88 328.6 464 46.1
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 1.3e-84 317.8 466 45.9
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 1.3e-82 311.2 446 45.3
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 6.2e-82 308.9 318 59.4
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 8.1e-82 308.5 465 44.3
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.4e-81 307.8 235 72.8
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 4.0e-81 306.2 438 47.3
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 4.5e-80 302.8 453 44.4
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 1.6e-77 294.3 426 46.0
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 8.7e-76 288.5 385 46.8
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 3.3e-75 286.6 281 57.7
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 1.5e-72 277.7 448 43.8
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 1.0e-68 265.0 230 63.0
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 1.1e-67 261.5 295 49.8
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 2.2e-66 257.3 438 44.1
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 3.8e-63 246.5 429 40.1
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 3.2e-62 243.4 444 41.2
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 1.6e-61 241.1 425 41.4
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 1.6e-61 241.1 432 40.7
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 1.8e-57 227.6 521 34.9
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 3.4e-56 223.4 237 54.9
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 5.1e-52 209.5 503 33.8
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 2.2e-42 177.6 162 61.7
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 3.5e-40 170.2 141 66.0
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 6.5e-39 166.0 490 30.0
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 8.8e-36 155.6 383 34.2
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 1.0e-28 132.1 546 27.8
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 1.3e-26 125.2 477 32.5
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 1.4e-09 68.6 124 33.1


User provided reference genes

Program Settings