Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22120 Davidia involucrata HOM05D000240 ORTHO05D183166 6.6e-34 146.7 71 100.0
Dinv09117 Davidia involucrata HOM05D000240 ORTHO05D000032 4.1e-28 127.5 65 93.8
Dinv24687 Davidia involucrata HOM05D000240 ORTHO05D185531 1.2e-16 89.4 58 77.6
Dinv23473 Davidia involucrata HOM05D000240 ORTHO05D001153 4.7e-16 87.4 52 82.7
Dinv10477 Davidia involucrata HOM05D000240 ORTHO05D181147 3.1e-15 84.7 58 74.1
Hma1.2p1_0066F.1_g035890 Hydrangea macrophylla HOM05D000240 ORTHO05D001153 4.9e-13 77.4 52 76.9
Dinv42014 Davidia involucrata HOM05D000240 ORTHO05D001153 1.1e-12 76.3 51 72.5
Lj5C191G7 Lonicera japonica HOM05D000240 ORTHO05D001153 1.1e-12 76.3 52 73.1
Cc02_g17060 Coffea canephora HOM05D000240 ORTHO05D001153 1.9e-12 75.5 52 71.2
Lj9C381G11 Lonicera japonica HOM05D000240 ORTHO05D001153 4.1e-12 74.3 52 69.2
Nitab4.5_0011132g0010 Nicotiana tabacum HOM05D000240 ORTHO05D001153 9.2e-12 73.2 52 63.5
TAR628G1129 Trochodendron aralioides HOM05D000240 ORTHO05D001153 1.6e-11 72.4 54 68.5
Nitab4.5_0002723g0070 Nicotiana tabacum HOM05D000240 ORTHO05D001153 3.5e-11 71.2 51 64.7
Actinidia27860 Actinidia chinensis HOM05D000240 ORTHO05D001153 7.8e-11 70.1 53 66.0
Solyc10g054080.3 Solanum lycopersicum HOM05D000240 ORTHO05D001153 7.8e-11 70.1 52 63.5
Sopen10g023930 Solanum pennellii HOM05D000240 ORTHO05D001153 7.8e-11 70.1 52 63.5
Nitab4.5_0003006g0010 Nicotiana tabacum HOM05D000240 ORTHO05D001153 1.7e-10 68.9 52 61.5
Solyc01g110190.4 Solanum lycopersicum HOM05D000240 ORTHO05D001153 1.7e-10 68.9 52 59.6
Sopen01g052350 Solanum pennellii HOM05D000240 ORTHO05D001153 1.7e-10 68.9 52 59.6
Nn6g32210 Nelumbo nucifera HOM05D000240 ORTHO05D001153 2.3e-10 68.6 54 63.0
CAN.G170.85 Capsicum annuum HOM05D000240 ORTHO05D001153 3.9e-10 67.8 49 63.3
Dinv32660 Davidia involucrata HOM05D005494 ORTHO05D006689 5.1e-10 67.4 82 48.8
CAN.G1.58 Capsicum annuum HOM05D000240 ORTHO05D001153 6.6e-10 67.0 52 59.6
Nitab4.5_0000589g0030 Nicotiana tabacum HOM05D000240 ORTHO05D001153 6.6e-10 67.0 52 59.6
Manes.11G088000 Manihot esculenta HOM05D000240 ORTHO05D001153 8.6e-10 66.6 54 66.7
TAR376G0052 Trochodendron aralioides HOM05D000240 ORTHO05D001153 8.6e-10 66.6 54 61.1
Hma1.2p1_0851F.1_g228305 Hydrangea macrophylla HOM05D000240 ORTHO05D001153 1.1e-09 66.2 52 61.5
TWI75G0793 Tripterygium wilfordii HOM05D000240 ORTHO05D001153 1.1e-09 66.2 54 63.0
Lsat_1_v5_gn_7_92061 Lactuca sativa HOM05D000240 ORTHO05D001153 1.5e-09 65.9 50 72.0
CsaV3_2G015170 Cucumis sativus L. HOM05D000240 ORTHO05D001153 1.9e-09 65.5 54 66.7
Solyc11g044880.3 Solanum lycopersicum HOM05D000240 ORTHO05D001153 1.9e-09 65.5 53 60.4
Sopen11g020380 Solanum pennellii HOM05D000240 ORTHO05D001153 1.9e-09 65.5 53 60.4
HanXRQChr04g0127671 Helianthus annuus HOM05D000240 ORTHO05D001153 3.3e-09 64.7 54 64.8
Cpa.g.sc150.41 Carica papaya HOM05D000240 ORTHO05D001153 5.6e-09 63.9 55 67.3
ClCG11G004000 Citrullus lanatus HOM05D000240 ORTHO05D001153 5.6e-09 63.9 54 64.8
Nn5g29194 Nelumbo nucifera HOM05D000240 ORTHO05D001153 5.6e-09 63.9 54 61.1
GSVIVG01024203001 Vitis vinifera HOM05D000240 ORTHO05D001153 5.6e-09 63.9 54 64.8
Haze_02306 Corylus avellana HOM05D000240 ORTHO05D001153 9.5e-09 63.2 54 63.0
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 1.2e-08 62.8 52 63.5
Peaxi162Scf00684g00222 Petunia axillaris HOM05D000240 ORTHO05D001153 1.2e-08 62.8 47 66.0
COL.COLO4_26016 Corchorus olitorius HOM05D000240 ORTHO05D001153 1.6e-08 62.4 54 61.1
Aqoxy6G02405 Aquilegia oxysepala HOM05D000240 ORTHO05D001153 2.1e-08 62.0 60 56.7
CSS0018000 Camellia sinensis var. sinensis HOM05D000240 ORTHO05D001153 2.1e-08 62.0 53 60.4
CANSAT11G1038 Cannabis sativa HOM05D000240 ORTHO05D001153 3.6e-08 61.2 55 65.5
Cfa005076 Carpinus fangiana HOM05D000240 ORTHO05D001153 3.6e-08 61.2 54 61.1
MELO3C023342.2 Cucumis melo HOM05D000240 ORTHO05D001153 3.6e-08 61.2 54 63.0
Nitab4.5_0005128g0010 Nicotiana tabacum HOM05D000240 ORTHO05D001153 3.6e-08 61.2 52 63.5
Sed0002918 Sechium edule HOM05D000240 ORTHO05D001153 3.6e-08 61.2 54 63.0
Nitab4.5_0001317g0090 Nicotiana tabacum HOM05D000240 ORTHO05D001153 4.7e-08 60.8 52 61.5
QL11p045641 Quercus lobata HOM05D000240 ORTHO05D001153 4.7e-08 60.8 56 64.3
CiPaw.05G071900 Carya illinoinensis HOM05D000240 ORTHO05D001153 6.2e-08 60.5 54 63.0
Lj1g0006393 Lotus japonicus HOM05D000240 ORTHO05D001153 6.2e-08 60.5 53 62.3
PGR142G1203 Punica granatum HOM05D000240 ORTHO05D001153 6.2e-08 60.5 54 61.1
Eucgr.I01311 Eucalyptus grandis HOM05D000240 ORTHO05D001153 8.1e-08 60.1 55 61.8
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 1.1e-07 59.7 52 61.5
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 1.1e-07 59.7 52 61.5
Duzib052G0374 Durio zibethinus HOM05D000240 ORTHO05D001153 1.1e-07 59.7 54 59.3
ECA236G3168 Erigeron canadensis HOM05D000240 ORTHO05D001153 1.1e-07 59.7 50 66.0
Dinv24005 Davidia involucrata HOM05D000240 ORTHO05D027588 1.4e-07 59.3 59 57.6
Duzib132G0039 Durio zibethinus HOM05D000240 ORTHO05D001153 1.4e-07 59.3 54 59.3
Manes.04G085200 Manihot esculenta HOM05D000240 ORTHO05D001153 1.4e-07 59.3 47 70.2
Ca_15343_v3 Cicer arietinum L. HOM05D000240 ORTHO05D001153 1.8e-07 58.9 54 63.0
Duzib248G1652 Durio zibethinus HOM05D000240 ORTHO05D001153 1.8e-07 58.9 53 60.4
Gohir.D13G029200 Gossypium hirsutum HOM05D000240 ORTHO05D001153 1.8e-07 58.9 54 57.4
Gorai.013G033200 Gossypium raimondii HOM05D000240 ORTHO05D001153 1.8e-07 58.9 54 57.4
FvH4_2g10080 Fragaria vesca HOM05D000240 ORTHO05D001153 2.4e-07 58.5 53 62.3
FAN24G1691 Fragaria x ananassa HOM05D000240 ORTHO05D001153 2.4e-07 58.5 53 62.3
MBI05_g10541_MAGBIO Magnolia biondii HOM05D000240 ORTHO05D001153 2.4e-07 58.5 52 55.8
Phvul.009G004100 Phaseolus vulgaris HOM05D000240 ORTHO05D001153 2.4e-07 58.5 54 57.4
Hund06267 Selenicereus undatus HOM05D000240 ORTHO05D001153 2.4e-07 58.5 57 56.1
Oeu008576.1 Olea europaea HOM05D000240 ORTHO05D001153 3.1e-07 58.2 54 59.3
Gohir.A13G031200 Gossypium hirsutum HOM05D000240 ORTHO05D001153 5.2e-07 57.4 54 55.6
VMungo1309G1100 Vigna mungo HOM05D000240 ORTHO05D001153 5.2e-07 57.4 54 59.3
Glyma.04G009100 Glycine max HOM05D000240 ORTHO05D001153 6.8e-07 57.0 55 61.8
Gohir.A01G003700 Gossypium hirsutum HOM05D000240 ORTHO05D001153 8.9e-07 56.6 51 60.8
Gohir.A04G123800 Gossypium hirsutum HOM05D000240 ORTHO05D001153 8.9e-07 56.6 53 56.6
Gohir.D01G003701 Gossypium hirsutum HOM05D000240 ORTHO05D001153 8.9e-07 56.6 51 60.8
Gohir.D04G165900 Gossypium hirsutum HOM05D000240 ORTHO05D001153 8.9e-07 56.6 53 56.6
Gorai.002G004600 Gossypium raimondii HOM05D000240 ORTHO05D001153 8.9e-07 56.6 51 60.8
Gorai.012G154300 Gossypium raimondii HOM05D000240 ORTHO05D001153 8.9e-07 56.6 53 56.6
Rhsim05G0069000 Rhododendron simsii HOM05D000240 ORTHO05D001153 8.9e-07 56.6 56 62.5
RcHm_v2.0_Chr6g0267011 Rosa chinensis HOM05D000240 ORTHO05D001153 8.9e-07 56.6 53 60.4
ClCG02G004660 Citrullus lanatus HOM05D000240 ORTHO05D001153 1.2e-06 56.2 47 66.0
HanXRQChr16g0506381 Helianthus annuus HOM05D000240 ORTHO05D001153 1.2e-06 56.2 49 65.3
VMungo1127G2069 Vigna mungo HOM05D000240 ORTHO05D001153 1.2e-06 56.2 52 61.5
FAN15G0690 Fragaria x ananassa HOM05D000240 ORTHO05D001153 1.5e-06 55.8 53 58.5
MBI16_g03089_MAGBIO Magnolia biondii HOM05D000240 ORTHO05D027588 1.5e-06 55.8 52 51.9
Prupe.8G087800 Prunus persica HOM05D000240 ORTHO05D001153 1.5e-06 55.8 54 59.3
Sed0023290 Sechium edule HOM05D000240 ORTHO05D001153 1.5e-06 55.8 53 60.4
CiPaw.06G130700 Carya illinoinensis HOM05D000240 ORTHO05D001153 3.4e-06 54.7 54 55.6
CDE08G0769 Ceratophyllum demersum HOM05D000240 ORTHO05D001153 3.4e-06 54.7 59 50.8
Phvul.011G040700 Phaseolus vulgaris HOM05D000240 ORTHO05D001153 4.4e-06 54.3 52 59.6
Psat5g003640 Pisum sativum HOM05D000240 ORTHO05D001153 4.4e-06 54.3 53 60.4
Sed0005078 Sechium edule HOM05D000240 ORTHO05D001153 5.8e-06 53.9 47 61.7
TPR.G32177 Trifolium pratense HOM05D000240 ORTHO05D001153 5.8e-06 53.9 53 58.5
TAR381G1096 Trochodendron aralioides HOM05D000240 ORTHO05D001153 5.8e-06 53.9 49 55.1
FAN20G1397 Fragaria x ananassa HOM05D000240 ORTHO05D001153 7.6e-06 53.5 53 58.5
Peaxi162Scf00016g00239 Petunia axillaris HOM05D000240 ORTHO05D001153 7.6e-06 53.5 52 51.9
CsaV3_7G000280 Cucumis sativus L. HOM05D000240 ORTHO05D001153 9.9e-06 53.1 48 64.6
Lsat_1_v5_gn_9_107600 Lactuca sativa HOM05D000240 ORTHO05D001153 9.9e-06 53.1 55 56.4


User provided reference genes

Program Settings