Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22095 Davidia involucrata HOM05D006754 ORTHO05D008403 1.1e-147 526.6 258 100.0
CSS0026926 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 5.4e-126 454.5 250 83.2
CSS0030688 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 5.4e-126 454.5 250 83.2
Dinv09390 Davidia involucrata HOM05D006754 ORTHO05D008403 3.7e-119 431.8 215 100.0
Atru.chr3.3972 Acer truncatum HOM05D006754 ORTHO05D008403 1.4e-118 429.9 250 80.8
Nitab4.5_0000272g0070 Nicotiana tabacum HOM05D006754 ORTHO05D008403 5.0e-116 421.4 249 78.7
Hma1.2p1_0615F.1_g189790 Hydrangea macrophylla HOM05D006754 ORTHO05D008403 1.5e-115 419.9 241 82.2
Potri.001G242400 Populus trichocarpa HOM05D006754 ORTHO05D008403 1.9e-115 419.5 250 79.2
TWI79G1092 Tripterygium wilfordii HOM05D006754 ORTHO05D008403 2.5e-115 419.1 250 79.2
QL01p030969 Quercus lobata HOM05D006754 ORTHO05D008403 4.2e-115 418.3 249 79.9
Sabra16G0147200 Salix brachista HOM05D006754 ORTHO05D008403 4.2e-115 418.3 250 78.8
PGSC0003DMG400030707 Solanum tuberosum HOM05D006754 ORTHO05D008403 4.2e-115 418.3 249 76.3
COL.COLO4_18549 Corchorus olitorius HOM05D006754 ORTHO05D008403 1.6e-114 416.4 250 78.4
Oeu026710.1 Olea europaea HOM05D006754 ORTHO05D008403 4.7e-114 414.8 242 79.8
Potri.009G033700 Populus trichocarpa HOM05D006754 ORTHO05D008403 6.1e-114 414.5 250 75.2
Solyc07g007700.3 Solanum lycopersicum HOM05D006754 ORTHO05D008403 1.8e-113 412.9 249 75.1
Sopen07g003690 Solanum pennellii HOM05D006754 ORTHO05D008403 3.0e-113 412.1 249 74.7
MD03G1088200 Malus domestica HOM05D006754 ORTHO05D008403 5.2e-113 411.4 250 76.0
PGR102G0280 Punica granatum HOM05D006754 ORTHO05D008403 6.8e-113 411.0 250 77.2
Ciclev10030407m.g Citrus clementina HOM05D006754 ORTHO05D008403 8.9e-113 410.6 250 78.4
HanXRQChr05g0135011 Helianthus annuus HOM05D006754 ORTHO05D008403 8.9e-113 410.6 250 75.2
Lj2P1066T40 Lonicera japonica HOM05D006754 ORTHO05D008403 2.0e-112 409.5 250 78.0
Nitab4.5_0007132g0020 Nicotiana tabacum HOM05D006754 ORTHO05D008403 4.4e-112 408.3 249 76.7
Cc01_g13150 Coffea canephora HOM05D006754 ORTHO05D008403 7.5e-112 407.5 242 78.9
DCAR_005953 Daucus carota HOM05D006754 ORTHO05D008403 1.3e-111 406.8 242 76.9
Haze_24130 Corylus avellana HOM05D006754 ORTHO05D008403 1.7e-111 406.4 242 80.6
MSTRG.21206 Avicennia marina HOM05D006754 ORTHO05D008403 2.2e-111 406.0 255 73.3
EL10Ac7g16047 Beta vulgaris HOM05D006754 ORTHO05D008403 2.9e-111 405.6 250 75.2
CiPaw.14G067200 Carya illinoinensis HOM05D006754 ORTHO05D008403 2.9e-111 405.6 250 77.2
Aqoxy2G02260 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 8.3e-111 404.1 250 78.0
Cpa.g.sc81.116 Carica papaya HOM05D006754 ORTHO05D008403 1.1e-110 403.7 244 77.9
Eucgr.B02322 Eucalyptus grandis HOM05D006754 ORTHO05D008403 1.4e-110 403.3 255 76.1
Nn8g38772 Nelumbo nucifera HOM05D006754 ORTHO05D008403 1.4e-110 403.3 241 79.3
Lsat_1_v5_gn_8_73421 Lactuca sativa HOM05D006754 ORTHO05D008403 1.8e-110 402.9 250 73.6
CAN.G969.5 Capsicum annuum HOM05D006754 ORTHO05D008403 3.2e-110 402.1 249 73.5
Thecc.09G318400 Theobroma cacao HOM05D006754 ORTHO05D008403 4.1e-110 401.7 250 76.4
Migut.F00608 Erythranthe guttata HOM05D006754 ORTHO05D008403 2.7e-109 399.1 255 72.5
Gorai.009G097800 Gossypium raimondii HOM05D006754 ORTHO05D008403 1.0e-108 397.1 250 75.6
Sc12g0001320 Simmondsia chinensis HOM05D006754 ORTHO05D008403 8.6e-108 394.0 250 75.6
RcHm_v2.0_Chr5g0065861 Rosa chinensis HOM05D006754 ORTHO05D008403 1.9e-107 392.9 253 71.1
Gohir.A05G094100 Gossypium hirsutum HOM05D006754 ORTHO05D008403 3.3e-107 392.1 250 75.2
Glyma.08G227600 Glycine max HOM05D006754 ORTHO05D008403 5.6e-107 391.3 242 75.6
Manes.01G171100 Manihot esculenta HOM05D006754 ORTHO05D008403 7.3e-107 391.0 242 76.0
Glyma.15G221700 Glycine max HOM05D006754 ORTHO05D008403 2.1e-106 389.4 241 75.5
FAN11G1342 Fragaria x ananassa HOM05D006754 ORTHO05D008403 3.6e-106 388.7 241 73.0
Ah.15g097770 Amaranthus hybridus HOM05D006754 ORTHO05D008403 8.0e-106 387.5 241 74.7
Duzib168G0850 Durio zibethinus HOM05D006754 ORTHO05D008403 8.0e-106 387.5 241 73.4
CsaV3_1G034490 Cucumis sativus L. HOM05D006754 ORTHO05D008403 1.0e-105 387.1 242 74.8
Lj3g0006516 Lotus japonicus HOM05D006754 ORTHO05D008403 1.0e-105 387.1 242 76.4
AT5G59500 Arabidopsis thaliana HOM05D006754 ORTHO05D008403 1.4e-105 386.7 250 69.6
FvH4_3g36800 Fragaria vesca HOM05D006754 ORTHO05D008403 1.4e-105 386.7 240 72.9
Prupe.6G072500 Prunus persica HOM05D006754 ORTHO05D008403 1.8e-105 386.3 231 76.2
THA.LOC104799439 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 2.3e-105 386.0 242 73.1
VMungo1127G1194 Vigna mungo HOM05D006754 ORTHO05D008403 2.3e-105 386.0 242 75.2
arahy.Tifrunner.gnm1.ann1.826T7K Arachis hypogaea HOM05D006754 ORTHO05D008403 3.1e-105 385.6 241 77.6
Aa31LG1G11840 Aethionema arabicum HOM05D006754 ORTHO05D008403 2.0e-104 382.9 255 70.6
Medtr8g044030 Medicago truncatula HOM05D006754 ORTHO05D008403 2.0e-104 382.9 250 70.8
FAN25G2379 Fragaria x ananassa HOM05D006754 ORTHO05D008403 5.8e-104 381.3 239 73.2
Thhalv10015639m.g Eutrema salsugineum HOM05D006754 ORTHO05D008403 7.5e-104 380.9 250 70.4
unitig_37.g12673 Utricularia gibba HOM05D006754 ORTHO05D008403 9.8e-104 380.6 242 72.7
SalBow7G4834 Salvia bowleyana HOM05D006754 ORTHO05D008403 1.3e-103 380.2 255 70.2
Phvul.011G187300 Phaseolus vulgaris HOM05D006754 ORTHO05D008403 1.7e-103 379.8 242 75.6
Sp6g21200 Schrenkiella parvula HOM05D006754 ORTHO05D008403 2.2e-103 379.4 241 71.4
PSO339G3555 Papaver somniferum HOM05D006754 ORTHO05D008403 2.9e-103 379.0 255 71.0
SalBow7G2225 Salvia bowleyana HOM05D006754 ORTHO05D008403 2.9e-103 379.0 255 69.8
AL8G35980 Arabidopsis lyrata HOM05D006754 ORTHO05D008403 4.9e-103 378.3 250 69.2
Psat4g178480 Pisum sativum HOM05D006754 ORTHO05D008403 4.9e-103 378.3 255 70.2
CARHR285870 Cardamine hirsuta HOM05D006754 ORTHO05D008403 6.4e-103 377.9 250 70.0
AUR62009543 Chenopodium quinoa HOM05D006754 ORTHO05D008403 8.3e-103 377.5 241 71.0
CANSAT56G3630 Cannabis sativa HOM05D006754 ORTHO05D008403 3.2e-102 375.6 251 73.7
PSO063G1099 Papaver somniferum HOM05D006754 ORTHO05D008403 3.2e-102 375.6 255 69.8
AUR62001757 Chenopodium quinoa HOM05D006754 ORTHO05D008403 9.2e-102 374.0 241 70.1
Carub.0008s2018 Capsella rubella HOM05D006754 ORTHO05D008403 1.2e-101 373.6 250 69.2
Ca_24122_v3 Cicer arietinum L. HOM05D006754 ORTHO05D008403 4.6e-101 371.7 242 70.2
BraA10t43752Z Brassica rapa HOM05D006754 ORTHO05D008403 6.0e-101 371.3 241 71.4
BcaC04g19764 Brassica carinata HOM05D006754 ORTHO05D008403 1.0e-100 370.5 241 71.4
C09p51900 Brassica napus HOM05D006754 ORTHO05D008403 1.0e-100 370.5 241 71.4
BolC9t58053H Brassica oleracea HOM05D006754 ORTHO05D008403 1.0e-100 370.5 241 71.4
ClCG03G001330 Citrullus lanatus HOM05D006754 ORTHO05D008403 1.0e-100 370.5 232 75.9
MBI14_g12133_MAGBIO Magnolia biondii HOM05D006754 ORTHO05D008403 1.0e-100 370.5 240 75.8
Sed0002230 Sechium edule HOM05D006754 ORTHO05D008403 1.0e-100 370.5 237 73.8
A10p16710 Brassica napus HOM05D006754 ORTHO05D008403 1.3e-100 370.2 241 71.4
THA.LOC104814881 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 2.3e-100 369.4 254 67.7
FAN16G0425 Fragaria x ananassa HOM05D006754 ORTHO05D008403 5.0e-100 368.2 245 69.4
CDE04G0725 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 1.2e-98 363.6 250 65.6
BcaB08g36252 Brassica carinata HOM05D006754 ORTHO05D008403 1.6e-98 363.2 241 69.7
CDE07G0060 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 2.0e-96 356.3 243 65.0
Peaxi162Scf00122g00144 Petunia axillaris HOM05D006754 ORTHO05D008403 4.9e-95 351.7 235 69.8
FAN21G1313 Fragaria x ananassa HOM05D006754 ORTHO05D008403 9.2e-94 347.4 293 60.1
ATR0752G045 Amborella trichopoda HOM05D006754 ORTHO05D008403 9.9e-88 327.4 250 61.2
SGA_v2.0_scaffold51G18718 Striga asiatica HOM05D006754 ORTHO05D008403 1.3e-87 327.0 249 60.2
Sed0016816 Sechium edule HOM05D006754 ORTHO05D008403 1.4e-86 323.6 250 63.6
Oeu004165.1 Olea europaea HOM05D006754 ORTHO05D008403 4.2e-78 295.4 167 80.8
Gohir.D05G094600 Gossypium hirsutum HOM05D006754 ORTHO05D008403 3.9e-76 288.9 177 75.1
Lalb_Chr01g0007611 Lupinus albus HOM05D006754 ORTHO05D008403 1.6e-69 266.9 250 54.8
ECA236G3563 Erigeron canadensis HOM05D006754 ORTHO05D008403 5.1e-68 261.9 149 78.5
TPR.G35751 Trifolium pratense HOM05D006754 ORTHO05D008403 3.5e-53 212.6 215 54.0
GSVIVG01024926001 Vitis vinifera HOM05D006754 ORTHO05D008403 5.7e-51 205.3 250 47.2
Nn4g26458 Nelumbo nucifera HOM05D006754 ORTHO05D008403 1.3e-47 194.1 115 77.4
Mapoly0044s0017 Marchantia polymorpha HOM05D006754 ORTHO05D008403 2.2e-47 193.4 255 40.8
Pp3c1_41830 Physcomitrium patens HOM05D006754 ORTHO05D008403 7.2e-46 188.3 251 38.6
C03p13670 Brassica napus HOM05D006754 ORTHO05D008403 2.1e-45 186.8 131 67.9
BolC3t13816H Brassica oleracea HOM05D006754 ORTHO05D008403 2.1e-45 186.8 131 67.9
SMO356G0015 Selaginella moellendorffii HOM05D006754 ORTHO05D008403 2.2e-42 176.8 260 38.1
AagrBONN_evm.TU.Sc2ySwM_368.2585 Anthoceros agrestis HOM05D006754 ORTHO05D008403 1.8e-41 173.7 258 38.0
Dinv06263 Davidia involucrata HOM05D006754 ORTHO05D008403 3.4e-40 169.5 97 89.7
HPP92_027965 Vanilla planifolia HOM05D006754 ORTHO05D008403 1.9e-38 163.7 142 57.7
BcaB05g22514 Brassica carinata HOM05D006754 ORTHO05D008403 1.4e-33 147.5 157 49.0
MD11G1097300 Malus domestica HOM05D006754 ORTHO05D008403 7.7e-32 141.7 139 53.2
CBR_g46210 Chara braunii HOM05D006754 ORTHO05D008403 5.1e-28 129.0 252 32.9
Aqoxy2G02265 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 1.1e-19 101.3 63 71.4
HPP92_001678 Vanilla planifolia HOM05D006754 ORTHO05D008403 1.8e-17 94.0 67 61.2
BcaC03g14007 Brassica carinata HOM05D006754 ORTHO05D008403 2.0e-11 73.9 94 45.7
C02p12450 Brassica napus HOM05D006754 ORTHO05D008403 2.6e-11 73.6 92 46.7
SEGI_33641 Sequoiadendron giganteum HOM05D006754 ORTHO05D008403 5.7e-11 72.4 169 27.8
Cre01.g049750 Chlamydomonas reinhardtii HOM05D006754 ORTHO05D008403 1.4e-09 67.8 235 28.1


User provided reference genes

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