Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv22012 Davidia involucrata HOM05D000678 ORTHO05D030926 2.2e-94 349.0 180 100.0
TWI12G0645 Tripterygium wilfordii HOM05D000678 ORTHO05D002523 2.8e-25 119.4 112 62.5
TWI56G0996 Tripterygium wilfordii HOM05D000678 ORTHO05D002523 1.8e-24 116.7 112 63.4
Cc10_g08240 Coffea canephora HOM05D000678 ORTHO05D002523 6.1e-20 101.7 123 55.3
TAR376G0926 Trochodendron aralioides HOM05D000678 ORTHO05D002523 1.2e-18 97.4 110 58.2
Lj4A742T40 Lonicera japonica HOM05D000678 ORTHO05D002523 2.0e-18 96.7 113 57.5
Dinv08964 Davidia involucrata HOM05D000678 ORTHO05D002523 4.4e-18 95.5 123 49.6
Nitab4.5_0001558g0070 Nicotiana tabacum HOM05D000678 ORTHO05D002523 2.2e-17 93.2 111 55.0
Lsat_1_v5_gn_6_107080 Lactuca sativa HOM05D000678 ORTHO05D002523 2.9e-17 92.8 103 53.4
Peaxi162Scf00674g00022 Petunia axillaris HOM05D000678 ORTHO05D002523 6.4e-17 91.7 111 53.2
Nitab4.5_0003464g0020 Nicotiana tabacum HOM05D000678 ORTHO05D002523 1.1e-16 90.9 114 53.5
Solyc04g076820.1 Solanum lycopersicum HOM05D000678 ORTHO05D002523 1.4e-16 90.5 114 50.9
Actinidia10265 Actinidia chinensis HOM05D000678 ORTHO05D030926 2.4e-16 89.7 105 48.6
TAR628G1260 Trochodendron aralioides HOM05D000678 ORTHO05D002523 2.4e-16 89.7 101 56.4
Hma1.2p1_0010F.1_g006370 Hydrangea macrophylla HOM05D000678 ORTHO05D002523 3.5e-15 85.9 105 54.3
CSS0030925 Camellia sinensis var. sinensis HOM05D000678 ORTHO05D002523 5.9e-15 85.1 124 47.6
CSS0047072 Camellia sinensis var. sinensis HOM05D000678 ORTHO05D002523 5.9e-15 85.1 124 47.6
Thecc.08G076400 Theobroma cacao HOM05D000678 ORTHO05D002523 7.8e-15 84.7 105 51.4
CiPaw.07G161700 Carya illinoinensis HOM05D000678 ORTHO05D002523 1.0e-14 84.3 104 54.8
Rhsim06G0069400 Rhododendron simsii HOM05D000678 ORTHO05D030926 2.3e-14 83.2 117 50.4
Manes.07G046900 Manihot esculenta HOM05D000678 ORTHO05D002523 3.9e-14 82.4 118 50.8
ECA246G4963 Erigeron canadensis HOM05D000678 ORTHO05D002523 5.0e-14 82.0 109 47.7
MBI16_g26238_MAGBIO Magnolia biondii HOM05D000678 ORTHO05D002523 5.0e-14 82.0 114 49.1
Dinv16036 Davidia involucrata HOM05D000678 ORTHO05D002523 1.1e-13 80.9 115 47.8
Lj4g0001813 Lotus japonicus HOM05D000678 ORTHO05D002523 1.1e-13 80.9 122 49.2
Duzib093G1283 Durio zibethinus HOM05D000678 ORTHO05D002523 3.3e-13 79.3 105 50.5
Duzib041G0367 Durio zibethinus HOM05D000678 ORTHO05D002523 5.6e-13 78.6 103 49.5
Cfa004801 Carpinus fangiana HOM05D000678 ORTHO05D002523 2.1e-12 76.6 128 46.1
Ciclev10030306m.g Citrus clementina HOM05D000678 ORTHO05D002523 2.1e-12 76.6 120 47.5
Lalb_Chr18g0060271 Lupinus albus HOM05D000678 ORTHO05D002523 2.8e-12 76.3 125 44.0
TWI59G0244 Tripterygium wilfordii HOM05D000678 ORTHO05D002523 2.8e-12 76.3 126 48.4
Lj9C342G6 Lonicera japonica HOM05D000678 ORTHO05D002523 4.7e-12 75.5 122 45.1
PGSC0003DMG400006383 Solanum tuberosum HOM05D000678 ORTHO05D002523 4.7e-12 75.5 77 59.7
Cpa.g.sc20.43 Carica papaya HOM05D000678 ORTHO05D002523 6.2e-12 75.1 124 45.2
Gorai.009G226800 Gossypium raimondii HOM05D000678 ORTHO05D002523 6.2e-12 75.1 105 46.7
SalBow6G1212 Salvia bowleyana HOM05D000678 ORTHO05D002523 6.2e-12 75.1 121 46.3
CiPaw.05G026700 Carya illinoinensis HOM05D000678 ORTHO05D002523 8.0e-12 74.7 116 47.4
Glyma.13G254300 Glycine max HOM05D000678 ORTHO05D002523 2.3e-11 73.2 123 43.9
Gohir.A05G217700 Gossypium hirsutum HOM05D000678 ORTHO05D002523 2.3e-11 73.2 96 49.0
Sabra02G0085600 Salix brachista HOM05D000678 ORTHO05D002523 2.3e-11 73.2 89 51.7
arahy.Tifrunner.gnm1.ann1.H4ECE6 Arachis hypogaea HOM05D000678 ORTHO05D002523 3.1e-11 72.8 122 44.3
arahy.Tifrunner.gnm1.ann1.I1SEHL Arachis hypogaea HOM05D000678 ORTHO05D002523 3.1e-11 72.8 122 44.3
Oeu014207.1 Olea europaea HOM05D000678 ORTHO05D002523 1.2e-10 70.9 130 44.6
Haze_22503 Corylus avellana HOM05D000678 ORTHO05D002523 1.5e-10 70.5 102 49.0
Eucgr.F00455 Eucalyptus grandis HOM05D000678 ORTHO05D002523 1.5e-10 70.5 110 42.7
Haze_10393 Corylus avellana HOM05D000678 ORTHO05D002523 2.0e-10 70.1 138 42.0
Lj5P225T19 Lonicera japonica HOM05D000678 ORTHO05D002523 2.0e-10 70.1 87 55.2
TWI23G0011 Tripterygium wilfordii HOM05D000678 ORTHO05D002523 2.0e-10 70.1 117 46.2
Gohir.D05G219800 Gossypium hirsutum HOM05D000678 ORTHO05D002523 3.4e-10 69.3 96 46.9
QL11p026666 Quercus lobata HOM05D000678 ORTHO05D002523 3.4e-10 69.3 142 42.3
Oeu025231.1 Olea europaea HOM05D000678 ORTHO05D002523 4.4e-10 68.9 120 41.7
MSTRG.5297 Avicennia marina HOM05D000678 ORTHO05D002523 5.8e-10 68.6 134 43.3
VMungo0251G2694 Vigna mungo HOM05D000678 ORTHO05D002523 7.5e-10 68.2 122 42.6
CSS0047036 Camellia sinensis var. sinensis HOM05D000678 ORTHO05D002523 1.3e-09 67.4 116 42.2
Duzib116G0324 Durio zibethinus HOM05D000678 ORTHO05D002523 1.7e-09 67.0 105 46.7
Psat7g104120 Pisum sativum HOM05D000678 ORTHO05D002523 1.7e-09 67.0 123 42.3
Gohir.D05G266600 Gossypium hirsutum HOM05D000678 ORTHO05D002523 3.7e-09 65.9 103 46.6
Thecc.02G124700 Theobroma cacao HOM05D000678 ORTHO05D002523 3.7e-09 65.9 107 46.7
Atru.chr13.943 Acer truncatum HOM05D000678 ORTHO05D002523 4.9e-09 65.5 123 44.7
Gohir.A05G264100 Gossypium hirsutum HOM05D000678 ORTHO05D002523 4.9e-09 65.5 103 46.6
Gorai.009G278600 Gossypium raimondii HOM05D000678 ORTHO05D002523 4.9e-09 65.5 103 46.6
Hma1.2p1_0908F.1_g235700 Hydrangea macrophylla HOM05D000678 ORTHO05D002523 4.9e-09 65.5 101 44.6
Potri.001G285800 Populus trichocarpa HOM05D000678 ORTHO05D002523 6.4e-09 65.1 112 44.6
Actinidia02413 Actinidia chinensis HOM05D000678 ORTHO05D002523 8.3e-09 64.7 113 41.6
CANSAT54G2740 Cannabis sativa HOM05D000678 ORTHO05D002523 8.3e-09 64.7 134 40.3
Cfa013830 Carpinus fangiana HOM05D000678 ORTHO05D002523 8.3e-09 64.7 98 46.9
Lalb_Chr16g0383111 Lupinus albus HOM05D000678 ORTHO05D002523 1.9e-08 63.5 127 40.2
PGR031G1720 Punica granatum HOM05D000678 ORTHO05D002523 2.4e-08 63.2 101 43.6
CSS0041524 Camellia sinensis var. sinensis HOM05D000678 ORTHO05D002523 3.2e-08 62.8 117 39.3
Sed0002041 Sechium edule HOM05D000678 ORTHO05D002523 3.2e-08 62.8 122 41.0
VMungo0540G2052 Vigna mungo HOM05D000678 ORTHO05D002523 3.2e-08 62.8 122 41.8
Duzib248G0657 Durio zibethinus HOM05D000678 ORTHO05D002523 5.4e-08 62.0 111 45.9
Gorai.012G145600 Gossypium raimondii HOM05D000678 ORTHO05D002523 5.4e-08 62.0 109 45.9
Aqoxy5G02099 Aquilegia oxysepala HOM05D000678 ORTHO05D002523 1.6e-07 60.5 118 44.1
Eucgr.I02580 Eucalyptus grandis HOM05D000678 ORTHO05D002523 2.7e-07 59.7 133 39.1
Medtr4g092850 Medicago truncatula HOM05D000678 ORTHO05D002523 2.7e-07 59.7 124 40.3
Aqoxy6G00632 Aquilegia oxysepala HOM05D000678 ORTHO05D002523 3.5e-07 59.3 105 47.6
Gohir.D04G158200 Gossypium hirsutum HOM05D000678 ORTHO05D002523 3.5e-07 59.3 108 44.4
MD05G1050100 Malus domestica HOM05D000678 ORTHO05D002523 3.5e-07 59.3 107 45.8
Nn1g05682 Nelumbo nucifera HOM05D000678 ORTHO05D002523 3.5e-07 59.3 113 40.7
AUR62027078 Chenopodium quinoa HOM05D000678 ORTHO05D002523 6.0e-07 58.5 115 43.5
Duzib132G0018 Durio zibethinus HOM05D000678 ORTHO05D002523 6.0e-07 58.5 108 43.5
Duzib248G0072 Durio zibethinus HOM05D000678 ORTHO05D026238 6.0e-07 58.5 111 45.0
Glyma.07G184400 Glycine max HOM05D000678 ORTHO05D002523 6.0e-07 58.5 122 43.4
Gohir.A03G179000 Gossypium hirsutum HOM05D000678 ORTHO05D002523 6.0e-07 58.5 112 44.6
Lj6g0009166 Lotus japonicus HOM05D000678 ORTHO05D002523 6.0e-07 58.5 126 40.5
Cc02_g20560 Coffea canephora HOM05D000678 ORTHO05D002523 1.0e-06 57.8 154 38.3
PSO761G0011 Papaver somniferum HOM05D000678 ORTHO05D002523 1.0e-06 57.8 113 44.2
Ciclev10001267m.g Citrus clementina HOM05D000678 ORTHO05D002523 1.3e-06 57.4 104 44.2
Sopen04g030530 Solanum pennellii HOM05D000678 ORTHO05D002523 1.3e-06 57.4 66 57.6
ClCG09G016430 Citrullus lanatus HOM05D000678 ORTHO05D002523 1.7e-06 57.0 120 40.8
Gohir.D02G202700 Gossypium hirsutum HOM05D000678 ORTHO05D002523 2.3e-06 56.6 112 43.8
PSO700G0097 Papaver somniferum HOM05D000678 ORTHO05D002523 2.3e-06 56.6 113 44.2
PGR142G2771 Punica granatum HOM05D000678 ORTHO05D002523 2.3e-06 56.6 126 37.3
Gorai.005G227800 Gossypium raimondii HOM05D000678 ORTHO05D002523 3.0e-06 56.2 112 43.8
ClCG08G011870 Citrullus lanatus HOM05D000678 ORTHO05D002523 5.0e-06 55.5 99 42.4
Glyma.08G065000 Glycine max HOM05D000678 ORTHO05D002523 5.0e-06 55.5 121 43.8
MELO3C018562.2 Cucumis melo HOM05D000678 ORTHO05D002523 6.6e-06 55.1 120 39.2
vmacro21365 Vaccinium macrocarpon HOM05D000678 ORTHO05D002523 6.6e-06 55.1 81 43.2
CsaV3_7G007400 Cucumis sativus L. HOM05D000678 ORTHO05D002523 8.6e-06 54.7 120 39.2
MD10G1057400 Malus domestica HOM05D000678 ORTHO05D002523 8.6e-06 54.7 117 41.9


User provided reference genes

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