Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv21952 Davidia involucrata HOM05D004921 ORTHO05D006008 1.9e-70 269.2 150 100.0
Actinidia36610 Actinidia chinensis HOM05D004921 ORTHO05D006008 2.4e-30 136.0 146 58.2
Lj4A880G51 Lonicera japonica HOM05D004921 ORTHO05D006008 3.0e-28 129.0 136 62.5
GSVIVG01022188001 Vitis vinifera HOM05D004921 ORTHO05D006008 1.1e-27 127.1 106 62.3
Hma1.2p1_0070F.1_g037670 Hydrangea macrophylla HOM05D004921 ORTHO05D006008 4.3e-27 125.2 146 50.0
TAR381G0204 Trochodendron aralioides HOM05D004921 ORTHO05D006008 7.4e-27 124.4 137 56.2
TAR381G1578 Trochodendron aralioides HOM05D004921 ORTHO05D006008 7.4e-27 124.4 137 56.2
HanXRQChr02g0041141 Helianthus annuus HOM05D004921 ORTHO05D006008 5.3e-25 118.2 140 55.0
Rhsim10G0156300 Rhododendron simsii HOM05D004921 ORTHO05D006008 4.5e-24 115.2 148 50.7
Nitab4.5_0001095g0090 Nicotiana tabacum HOM05D004921 ORTHO05D006008 4.2e-22 108.6 142 49.3
Sopen04g024290 Solanum pennellii HOM05D004921 ORTHO05D006008 5.5e-22 108.2 125 52.0
MBI05_g00773_MAGBIO Magnolia biondii HOM05D004921 ORTHO05D006008 1.0e-20 104.0 135 45.9
Lalb_Chr13g0296081 Lupinus albus HOM05D004921 ORTHO05D006008 3.0e-20 102.4 146 46.6
ECA246G4277 Erigeron canadensis HOM05D004921 ORTHO05D006008 3.9e-20 102.1 147 49.7
Phvul.002G262700 Phaseolus vulgaris HOM05D004921 ORTHO05D006008 1.6e-18 96.7 149 43.0
Eucgr.I00377 Eucalyptus grandis HOM05D004921 ORTHO05D006008 3.1e-17 92.4 128 46.9
Manes.12G138700 Manihot esculenta HOM05D004921 ORTHO05D006008 3.1e-17 92.4 109 47.7
Sc03g0002320 Simmondsia chinensis HOM05D004921 ORTHO05D006008 3.1e-17 92.4 109 46.8
DCAR_001020 Daucus carota HOM05D004921 ORTHO05D006008 1.2e-16 90.5 137 43.8
VMungo0251G2130 Vigna mungo HOM05D004921 ORTHO05D006008 1.2e-16 90.5 146 41.8
Glyma.08G139400 Glycine max HOM05D004921 ORTHO05D006008 1.5e-16 90.1 143 43.4
Lj4g0017071 Lotus japonicus HOM05D004921 ORTHO05D006008 1.5e-16 90.1 118 50.0
Glyma.05G181700 Glycine max HOM05D004921 ORTHO05D006008 3.4e-16 89.0 147 42.2
vmacro12934 Vaccinium macrocarpon HOM05D004921 ORTHO05D006008 3.4e-16 89.0 112 49.1
arahy.Tifrunner.gnm1.ann1.WRB6NJ Arachis hypogaea HOM05D004921 ORTHO05D006008 4.5e-16 88.6 127 45.7
Lalb_Chr07g0184941 Lupinus albus HOM05D004921 ORTHO05D006008 4.5e-16 88.6 118 50.0
MSTRG.2547 Avicennia marina HOM05D004921 ORTHO05D006008 1.3e-15 87.0 140 42.9
PGR004G1500 Punica granatum HOM05D004921 ORTHO05D006008 3.8e-15 85.5 144 43.1
Psat7g053360 Pisum sativum HOM05D004921 ORTHO05D006008 5.0e-15 85.1 122 47.5
CANSAT01G2911 Cannabis sativa HOM05D004921 ORTHO05D006008 1.1e-14 84.0 147 42.2
Atru.chr4.263 Acer truncatum HOM05D004921 ORTHO05D006008 1.9e-14 83.2 150 40.7
CSS0005403 Camellia sinensis var. sinensis HOM05D004921 ORTHO05D006008 2.5e-14 82.8 121 47.1
Peaxi162Scf00204g00620 Petunia axillaris HOM05D004921 ORTHO05D006008 2.5e-14 82.8 114 43.0
arahy.Tifrunner.gnm1.ann1.P05418 Arachis hypogaea HOM05D004921 ORTHO05D006008 4.2e-14 82.0 149 39.6
Nitab4.5_0000518g0040 Nicotiana tabacum HOM05D004921 ORTHO05D006008 4.2e-14 82.0 101 49.5
Haze_24997 Corylus avellana HOM05D004921 ORTHO05D006008 2.1e-13 79.7 101 48.5
MELO3C007782.2 Cucumis melo HOM05D004921 ORTHO05D006008 2.7e-13 79.3 146 44.5
QL06p050536 Quercus lobata HOM05D004921 ORTHO05D006008 2.7e-13 79.3 125 40.8
Cc07_g15680 Coffea canephora HOM05D004921 ORTHO05D006008 1.8e-12 76.6 130 44.6
Hund13647 Selenicereus undatus HOM05D004921 ORTHO05D006008 1.8e-12 76.6 113 42.5
TPR.G2186 Trifolium pratense HOM05D004921 ORTHO05D006008 2.3e-12 76.3 118 45.8
Duzib147G0642 Durio zibethinus HOM05D004921 ORTHO05D006008 3.9e-12 75.5 126 42.1
Sed0006076 Sechium edule HOM05D004921 ORTHO05D006008 6.7e-12 74.7 138 42.8
Duzib187G0704 Durio zibethinus HOM05D004921 ORTHO05D006008 8.8e-12 74.3 146 38.4
Nn5g28998 Nelumbo nucifera HOM05D004921 ORTHO05D006008 1.9e-11 73.2 71 60.6
Lsat_1_v5_gn_5_40701 Lactuca sativa HOM05D004921 ORTHO05D006008 7.4e-11 71.2 105 42.9
EL10Ac6g15063 Beta vulgaris HOM05D004921 ORTHO05D006008 9.7e-11 70.9 96 45.8
Gohir.A11G198900 Gossypium hirsutum HOM05D004921 ORTHO05D006008 9.7e-11 70.9 109 43.1
CsaV3_6G045720 Cucumis sativus L. HOM05D004921 ORTHO05D006008 1.3e-10 70.5 140 43.6
Gorai.007G242500 Gossypium raimondii HOM05D004921 ORTHO05D006008 1.3e-10 70.5 141 37.6
Gohir.D11G225200 Gossypium hirsutum HOM05D004921 ORTHO05D006008 2.8e-10 69.3 139 38.1
Potri.005G080200 Populus trichocarpa HOM05D004921 ORTHO05D006008 8.2e-10 67.8 158 36.1
Ciclev10025222m.g Citrus clementina HOM05D004921 ORTHO05D006008 1.8e-09 66.6 137 38.0
TWI53G0980 Tripterygium wilfordii HOM05D004921 ORTHO05D006008 5.3e-09 65.1 147 37.4
Aa31LG6G15580 Aethionema arabicum HOM05D004921 ORTHO05D006008 6.9e-09 64.7 165 33.3
THA.LOC104807708 Tarenaya hassleriana HOM05D004921 ORTHO05D006008 1.5e-08 63.5 164 34.1
Thhalv10024641m.g Eutrema salsugineum HOM05D004921 ORTHO05D006008 3.4e-08 62.4 162 34.0
Migut.H02393 Erythranthe guttata HOM05D004921 ORTHO05D006008 4.5e-08 62.0 121 37.2
Os04g0636600 Oryza sativa ssp. japonica HOM05D004921 ORTHO05D006008 5.9e-08 61.6 89 39.3
AL7G11890 Arabidopsis lyrata HOM05D004921 ORTHO05D006008 3.8e-07 58.9 168 34.5
AT4G39690 Arabidopsis thaliana HOM05D004921 ORTHO05D006008 3.8e-07 58.9 163 33.7
Thecc.01G107800 Theobroma cacao HOM05D004921 ORTHO05D006008 5.0e-07 58.5 155 38.1
RcHm_v2.0_Chr2g0115541 Rosa chinensis HOM05D004921 ORTHO05D006008 8.5e-07 57.8 149 34.2
COL.COLO4_11048 Corchorus olitorius HOM05D004921 ORTHO05D006008 1.4e-06 57.0 144 35.4
Potri.007G087100 Populus trichocarpa HOM05D004921 ORTHO05D006008 1.4e-06 57.0 149 34.2
Medtr8g091480 Medicago truncatula HOM05D004921 ORTHO05D006008 2.5e-06 56.2 140 35.0
Sp7g36200 Schrenkiella parvula HOM05D004921 ORTHO05D006008 5.5e-06 55.1 126 34.1


User provided reference genes

Program Settings