Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv21781 Davidia involucrata HOM05D006653 ORTHO05D008346 3.0e-136 488.4 232 100.0
Actinidia29724 Actinidia chinensis HOM05D006653 ORTHO05D008346 1.2e-105 386.7 227 80.2
Hma1.2p1_1013F.1_g247760 Hydrangea macrophylla HOM05D006653 ORTHO05D008346 4.0e-104 381.7 227 80.2
CSS0019013 Camellia sinensis var. sinensis HOM05D006653 ORTHO05D008346 1.2e-103 380.2 227 78.4
Cc02_g06010 Coffea canephora HOM05D006653 ORTHO05D008346 9.5e-98 360.5 227 72.2
Cfa001271 Carpinus fangiana HOM05D006653 ORTHO05D008346 3.6e-97 358.6 227 73.6
Haze_17274 Corylus avellana HOM05D006653 ORTHO05D008346 3.6e-97 358.6 229 74.2
Haze_17283 Corylus avellana HOM05D006653 ORTHO05D008346 1.8e-96 356.3 229 73.8
Lj6g0008682 Lotus japonicus HOM05D006653 ORTHO05D008346 3.4e-95 352.1 226 69.9
QL08p063830 Quercus lobata HOM05D006653 ORTHO05D008346 1.7e-94 349.7 226 72.1
CiPaw.01G301500 Carya illinoinensis HOM05D006653 ORTHO05D008346 2.8e-94 349.0 227 72.7
Prupe.2G256500 Prunus persica HOM05D006653 ORTHO05D008346 2.0e-92 342.8 222 74.8
Glyma.18G024100 Glycine max HOM05D006653 ORTHO05D008346 7.8e-92 340.9 227 68.7
Nn2g13243 Nelumbo nucifera HOM05D006653 ORTHO05D008346 1.3e-91 340.1 232 69.0
TWI53G0670 Tripterygium wilfordii HOM05D006653 ORTHO05D008346 3.8e-91 338.6 227 70.0
Eucgr.G03091 Eucalyptus grandis HOM05D006653 ORTHO05D008346 1.1e-90 337.0 227 69.2
Oeu001415.1 Olea europaea HOM05D006653 ORTHO05D008346 1.5e-90 336.7 227 69.6
vmacro06946 Vaccinium macrocarpon HOM05D006653 ORTHO05D008346 4.3e-90 335.1 251 66.9
Migut.F00634 Erythranthe guttata HOM05D006653 ORTHO05D008346 1.2e-89 333.6 227 70.0
Peaxi162Scf01149g00326 Petunia axillaris HOM05D006653 ORTHO05D008346 2.1e-89 332.8 227 67.8
CsaV3_5G010530 Cucumis sativus L. HOM05D006653 ORTHO05D008346 2.8e-89 332.4 227 68.3
Lalb_Chr23g0277111 Lupinus albus HOM05D006653 ORTHO05D008346 4.7e-89 331.6 227 66.1
Rhsim03G0147300 Rhododendron simsii HOM05D006653 ORTHO05D008346 4.7e-89 331.6 257 64.6
CAN.G203.2 Capsicum annuum HOM05D006653 ORTHO05D008346 3.0e-88 328.9 232 66.4
Phvul.001G246100 Phaseolus vulgaris HOM05D006653 ORTHO05D008346 8.9e-88 327.4 227 65.2
GSVIVG01032749001 Vitis vinifera HOM05D006653 ORTHO05D008346 8.9e-88 327.4 227 68.7
Nitab4.5_0003391g0090 Nicotiana tabacum HOM05D006653 ORTHO05D008346 1.2e-87 327.0 224 66.5
Aqoxy2G00794 Aquilegia oxysepala HOM05D006653 ORTHO05D008346 2.6e-87 325.9 232 64.2
Nitab4.5_0000789g0140 Nicotiana tabacum HOM05D006653 ORTHO05D008346 2.6e-87 325.9 226 66.4
Ca_15156_v3 Cicer arietinum L. HOM05D006653 ORTHO05D008346 3.4e-87 325.5 227 66.1
Ciclev10032369m.g Citrus clementina HOM05D006653 ORTHO05D008346 1.7e-86 323.2 227 64.8
Medtr3g071640 Medicago truncatula HOM05D006653 ORTHO05D008346 2.2e-86 322.8 227 66.1
SGA_v2.0_scaffold60G20961 Striga asiatica HOM05D006653 ORTHO05D008346 4.9e-86 321.6 227 67.8
MD01G1158200 Malus domestica HOM05D006653 ORTHO05D008346 6.4e-86 321.2 221 69.7
Potri.008G073200 Populus trichocarpa HOM05D006653 ORTHO05D008346 8.3e-86 320.9 227 65.6
MSTRG.27303 Avicennia marina HOM05D006653 ORTHO05D008346 1.1e-85 320.5 227 67.0
FAN06G1821 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.8e-85 319.7 228 68.0
PSO339G4279 Papaver somniferum HOM05D006653 ORTHO05D008346 2.4e-85 319.3 232 63.8
PSO801G0584 Papaver somniferum HOM05D006653 ORTHO05D008346 2.4e-85 319.3 232 64.2
Sopen05g030990 Solanum pennellii HOM05D006653 ORTHO05D008346 7.0e-85 317.8 227 65.6
FAN01G0493 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.2e-84 317.0 228 67.1
CANSAT56G3810 Cannabis sativa HOM05D006653 ORTHO05D008346 1.6e-84 316.6 209 68.4
Thecc.10G010700 Theobroma cacao HOM05D006653 ORTHO05D008346 2.0e-84 316.2 227 65.6
Solyc05g052460.3 Solanum lycopersicum HOM05D006653 ORTHO05D008346 2.7e-84 315.8 226 65.0
Sabra08G0054400 Salix brachista HOM05D006653 ORTHO05D008346 3.5e-84 315.5 235 64.7
Sc10g0002660 Simmondsia chinensis HOM05D006653 ORTHO05D008346 5.9e-84 314.7 227 65.6
Duzib106G1369 Durio zibethinus HOM05D006653 ORTHO05D008346 1.0e-83 313.9 227 64.3
MELO3C034224.2 Cucumis melo HOM05D006653 ORTHO05D008346 2.3e-83 312.8 232 64.2
SalBow3G2417 Salvia bowleyana HOM05D006653 ORTHO05D008346 2.3e-83 312.8 227 67.0
DCAR_011848 Daucus carota HOM05D006653 ORTHO05D008346 4.3e-82 308.5 202 71.8
MD07G1226900 Malus domestica HOM05D006653 ORTHO05D008346 7.3e-82 307.8 221 67.9
SalBow3G2982 Salvia bowleyana HOM05D006653 ORTHO05D008346 1.2e-81 307.0 248 61.7
TAR633G2597 Trochodendron aralioides HOM05D006653 ORTHO05D008346 1.2e-81 307.0 204 69.1
Sed0010106 Sechium edule HOM05D006653 ORTHO05D008346 2.1e-81 306.2 227 63.0
RcHm_v2.0_Chr1g0371041 Rosa chinensis HOM05D006653 ORTHO05D008346 6.2e-81 304.7 228 64.5
Gorai.011G290500 Gossypium raimondii HOM05D006653 ORTHO05D008346 8.0e-81 304.3 225 62.7
HanXRQChr17g0560871 Helianthus annuus HOM05D006653 ORTHO05D008346 8.0e-81 304.3 228 63.2
ECA233G2660 Erigeron canadensis HOM05D006653 ORTHO05D008346 1.1e-80 303.9 222 64.0
THA.LOC104810122 Tarenaya hassleriana HOM05D006653 ORTHO05D008346 2.0e-79 299.7 221 63.8
Lsat_1_v5_gn_8_12960 Lactuca sativa HOM05D006653 ORTHO05D008346 5.8e-79 298.1 227 60.4
EL10Ac2g04898 Beta vulgaris HOM05D006653 ORTHO05D008346 7.5e-79 297.7 227 61.2
Manes.10G008100 Manihot esculenta HOM05D006653 ORTHO05D008346 1.3e-78 297.0 206 67.0
FvH4_7g25140 Fragaria vesca HOM05D006653 ORTHO05D008346 1.7e-78 296.6 202 68.8
Psat5g130600 Pisum sativum HOM05D006653 ORTHO05D008346 8.3e-78 294.3 202 67.3
ECA232G4592 Erigeron canadensis HOM05D006653 ORTHO05D008346 3.2e-77 292.4 251 57.8
arahy.Tifrunner.gnm1.ann1.CC0JZ8 Arachis hypogaea HOM05D006653 ORTHO05D008346 1.2e-76 290.4 284 50.7
C04p07070 Brassica napus HOM05D006653 ORTHO05D008346 1.2e-76 290.4 219 60.7
FAN03G1392 Fragaria x ananassa HOM05D006653 ORTHO05D008346 1.6e-76 290.0 227 63.4
Carub.0004s2256 Capsella rubella HOM05D006653 ORTHO05D008346 2.7e-76 289.3 227 59.9
Aa31LG5G19250 Aethionema arabicum HOM05D006653 ORTHO05D008346 4.6e-76 288.5 227 59.5
Lj8C62G17 Lonicera japonica HOM05D006653 ORTHO05D008346 6.0e-76 288.1 189 76.2
AL4G38130 Arabidopsis lyrata HOM05D006653 ORTHO05D008346 1.0e-75 287.3 227 59.9
Thhalv10017062m.g Eutrema salsugineum HOM05D006653 ORTHO05D008346 1.3e-75 287.0 221 61.1
FAN10G0035 Fragaria x ananassa HOM05D006653 ORTHO05D008346 2.3e-75 286.2 221 64.3
Lsat_1_v5_gn_9_60841 Lactuca sativa HOM05D006653 ORTHO05D008346 5.0e-75 285.0 228 60.5
A05p06130 Brassica napus HOM05D006653 ORTHO05D008346 8.6e-75 284.3 219 59.8
BcaC02g12146 Brassica carinata HOM05D006653 ORTHO05D008346 1.1e-74 283.9 219 60.3
Atru.chr12.104 Acer truncatum HOM05D006653 ORTHO05D008346 2.1e-73 279.6 193 68.4
Sp4g22650 Schrenkiella parvula HOM05D006653 ORTHO05D008346 2.8e-73 279.3 221 58.8
TPR.G27742 Trifolium pratense HOM05D006653 ORTHO05D008346 2.8e-73 279.3 322 47.2
CARHR135400 Cardamine hirsuta HOM05D006653 ORTHO05D008346 8.1e-73 277.7 207 62.8
Gohir.D10G250100 Gossypium hirsutum HOM05D006653 ORTHO05D008346 8.1e-73 277.7 200 63.0
Ah.10g036190 Amaranthus hybridus HOM05D006653 ORTHO05D008346 1.1e-72 277.3 227 57.3
Duzib114G1011 Durio zibethinus HOM05D006653 ORTHO05D008346 4.0e-72 275.4 227 59.0
Gohir.A10G238200 Gossypium hirsutum HOM05D006653 ORTHO05D008346 4.0e-72 275.4 200 62.0
PGR142G3637 Punica granatum HOM05D006653 ORTHO05D008346 2.0e-71 273.1 199 62.8
HanXRQChr09g0253161 Helianthus annuus HOM05D006653 ORTHO05D008346 4.4e-71 271.9 227 59.5
ATR0174G059 Amborella trichopoda HOM05D006653 ORTHO05D008346 5.8e-71 271.6 232 54.3
BolC4t22332H Brassica oleracea HOM05D006653 ORTHO05D008346 1.4e-69 266.9 213 57.7
HPP92_000719 Vanilla planifolia HOM05D006653 ORTHO05D008346 1.4e-69 266.9 223 57.4
BcaB02g09031 Brassica carinata HOM05D006653 ORTHO05D008346 2.4e-69 266.2 220 57.7
AT2G40316 Arabidopsis thaliana HOM05D006653 ORTHO05D008346 4.6e-68 261.9 207 58.0
ClCG07G004590 Citrullus lanatus HOM05D006653 ORTHO05D008346 6.6e-67 258.1 223 58.3
Hund13903 Selenicereus undatus HOM05D006653 ORTHO05D008346 1.6e-65 253.4 198 59.6
arahy.Tifrunner.gnm1.ann1.WF4WBF Arachis hypogaea HOM05D006653 ORTHO05D008346 8.9e-64 247.7 234 54.3
BraA05t19578Z Brassica rapa HOM05D006653 ORTHO05D008346 2.0e-63 246.5 229 52.0
VMungo1383G0363 Vigna mungo HOM05D006653 ORTHO05D008346 4.4e-63 245.4 166 67.5
PGR142G1681 Punica granatum HOM05D006653 ORTHO05D008346 8.4e-62 241.1 180 62.2
AUR62022948 Chenopodium quinoa HOM05D006653 ORTHO05D008346 2.7e-60 236.1 209 55.5
PGSC0003DMG400027171 Solanum tuberosum HOM05D006653 ORTHO05D008346 1.1e-58 230.7 226 52.7
Glyma.11G233000 Glycine max HOM05D006653 ORTHO05D008346 1.5e-58 230.3 176 62.5
AUR62012309 Chenopodium quinoa HOM05D000043 ORTHO05D003538 4.9e-54 215.3 231 48.9
Zm00001eb013720 Zea mays HOM05D006653 ORTHO05D008346 1.7e-46 190.3 174 53.4
MBI03_g37948_MAGBIO Magnolia biondii HOM05D006653 ORTHO05D008346 7.1e-45 184.9 307 36.2
CDE06G2038 Ceratophyllum demersum HOM05D006653 ORTHO05D008346 5.6e-42 175.3 160 53.8
Pp3c11_970 Physcomitrium patens HOM05D006653 ORTHO05D008346 1.1e-40 171.0 216 40.7
Mapoly0095s0003 Marchantia polymorpha HOM05D006653 ORTHO05D008346 9.0e-40 167.9 211 40.3
Pp3c2_28750 Physcomitrium patens HOM05D006653 ORTHO05D008346 2.9e-38 162.9 207 40.1
Dinv10585 Davidia involucrata HOM05D006653 ORTHO05D008346 9.0e-32 141.4 91 73.6
SMO203G0248 Selaginella moellendorffii HOM05D006653 ORTHO05D008346 5.5e-29 132.1 179 36.9
COL.COLO4_25792 Corchorus olitorius HOM05D006653 ORTHO05D008346 1.6e-25 120.6 131 45.8
AagrBONN_evm.TU.Sc2ySwM_362.1315 Anthoceros agrestis HOM05D006653 ORTHO05D008346 6.9e-24 115.2 133 40.6
Manes.07G074522 Manihot esculenta HOM05D006653 ORTHO05D008346 3.8e-22 109.4 91 59.3
HanXRQChr08g0221951 Helianthus annuus HOM05D006653 ORTHO05D008346 7.4e-18 95.1 110 47.3
SEGI_38425 Sequoiadendron giganteum HOM05D006653 ORTHO05D008346 6.3e-17 92.0 72 51.4
Cpa.g.sc19.127 Carica papaya HOM05D006653 ORTHO05D008346 1.1e-16 91.3 58 69.0
SHI28813 Sapria himalayana HOM05D006653 ORTHO05D008346 1.5e-15 87.4 125 38.4
Manes.04G030750 Manihot esculenta HOM05D006653 ORTHO05D008346 5.9e-15 85.5 59 64.4
Manes.07G134901 Manihot esculenta HOM05D006653 ORTHO05D008346 3.2e-13 79.7 119 42.9
CDE04G0201 Ceratophyllum demersum HOM05D002034 ORTHO05D006399 1.8e-08 63.9 75 44.0
HanXRQChr08g0221941 Helianthus annuus HOM05D006653 ORTHO05D008346 4.5e-07 59.3 67 53.7
Lsat_1_v5_gn_5_133280 Lactuca sativa HOM05D005717 ORTHO05D007221 1.3e-06 57.8 71 45.1


User provided reference genes

Program Settings