Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv21739 Davidia involucrata HOM05D005616 ORTHO05D006975 5.8e-82 307.4 141 100.0
Dinv10614 Davidia involucrata HOM05D005616 ORTHO05D006975 1.8e-59 232.6 130 83.1
CSS0002000 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 6.9e-59 230.7 130 80.8
CSS0029859 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 6.9e-59 230.7 130 80.8
CSS0019139 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 1.9e-56 222.6 130 79.2
Lj8A66T51 Lonicera japonica HOM05D005616 ORTHO05D006975 2.4e-56 222.2 119 82.4
Haze_17234 Corylus avellana HOM05D005616 ORTHO05D006975 9.3e-56 220.3 130 79.2
vmacro06962 Vaccinium macrocarpon HOM05D005616 ORTHO05D006975 2.7e-55 218.8 130 80.0
Ciclev10032361m.g Citrus clementina HOM05D005616 ORTHO05D006975 3.5e-55 218.4 119 80.7
Cfa001309 Carpinus fangiana HOM05D005616 ORTHO05D006975 1.0e-54 216.9 130 78.5
Nitab4.5_0005018g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 1.8e-54 216.1 119 81.5
Thecc.10G015200 Theobroma cacao HOM05D005616 ORTHO05D006975 3.0e-54 215.3 119 79.0
GSVIVG01032805001 Vitis vinifera HOM05D005616 ORTHO05D006975 3.0e-54 215.3 130 77.7
TAR623G1070 Trochodendron aralioides HOM05D005616 ORTHO05D006975 5.1e-54 214.5 130 76.9
Lj1g0010131 Lotus japonicus HOM05D005616 ORTHO05D006975 4.3e-53 211.5 125 76.8
Oeu004695.1 Olea europaea HOM05D005616 ORTHO05D006975 7.4e-53 210.7 130 73.8
Lj6g0010776 Lotus japonicus HOM05D005616 ORTHO05D006975 1.6e-52 209.5 119 79.8
arahy.Tifrunner.gnm1.ann1.061K9L Arachis hypogaea HOM05D005616 ORTHO05D006975 2.1e-52 209.1 119 79.0
arahy.Tifrunner.gnm1.ann1.R92L2M Arachis hypogaea HOM05D005616 ORTHO05D006975 2.8e-52 208.8 119 79.0
Cc02_g06410 Coffea canephora HOM05D005616 ORTHO05D006975 2.8e-52 208.8 119 80.7
FAN03G0254 Fragaria x ananassa HOM05D005616 ORTHO05D006975 2.8e-52 208.8 119 77.3
FAN07G0068 Fragaria x ananassa HOM05D005616 ORTHO05D006975 3.6e-52 208.4 119 78.2
Nitab4.5_0003454g0010 Nicotiana tabacum HOM05D005616 ORTHO05D006975 3.6e-52 208.4 119 79.0
DCAR_023439 Daucus carota HOM05D005616 ORTHO05D006975 4.8e-52 208.0 119 77.3
Glyma.18G026400 Glycine max HOM05D005616 ORTHO05D006975 4.8e-52 208.0 125 76.0
Prupe.2G251100 Prunus persica HOM05D005616 ORTHO05D006975 4.8e-52 208.0 119 76.5
RcHm_v2.0_Chr1g0370411 Rosa chinensis HOM05D005616 ORTHO05D006975 6.2e-52 207.6 119 77.3
PGSC0003DMG400010237 Solanum tuberosum HOM05D005616 ORTHO05D006975 6.2e-52 207.6 119 79.0
HanXRQChr08g0222401 Helianthus annuus HOM05D005616 ORTHO05D006975 8.1e-52 207.2 119 74.8
Migut.F00691 Erythranthe guttata HOM05D005616 ORTHO05D006975 1.4e-51 206.5 130 73.1
Ca_15132_v3 Cicer arietinum L. HOM05D005616 ORTHO05D006975 1.8e-51 206.1 119 76.5
FAN01G0309 Fragaria x ananassa HOM05D001932 ORTHO05D006975 1.8e-51 206.1 119 76.5
Glyma.11G230900 Glycine max HOM05D005616 ORTHO05D006975 1.8e-51 206.1 119 78.2
Gohir.A10G237500 Gossypium hirsutum HOM05D005616 ORTHO05D006975 1.8e-51 206.1 119 76.5
Peaxi162Scf00284g01041 Petunia axillaris HOM05D005616 ORTHO05D006975 2.4e-51 205.7 119 77.3
Phvul.001G244100 Phaseolus vulgaris HOM05D005616 ORTHO05D006975 2.4e-51 205.7 125 74.4
Solyc02g076760.3 Solanum lycopersicum HOM05D005616 ORTHO05D006975 2.4e-51 205.7 119 76.5
ECA233G4091 Erigeron canadensis HOM05D005616 ORTHO05D006975 3.1e-51 205.3 119 77.3
Gorai.012G116600 Gossypium raimondii HOM05D005616 ORTHO05D006975 3.1e-51 205.3 119 76.5
Lalb_Chr08g0231681 Lupinus albus HOM05D005616 ORTHO05D006975 3.1e-51 205.3 125 73.6
TPR.G11210 Trifolium pratense HOM05D005616 ORTHO05D006975 4.0e-51 204.9 119 77.3
FAN10G3671 Fragaria x ananassa HOM05D005616 ORTHO05D006975 5.3e-51 204.5 119 75.6
Gohir.A04G093400 Gossypium hirsutum HOM05D005616 ORTHO05D006975 5.3e-51 204.5 119 77.3
Eucgr.J00201 Eucalyptus grandis HOM05D005616 ORTHO05D006975 6.9e-51 204.1 119 76.5
Manes.10G011400 Manihot esculenta HOM05D005616 ORTHO05D006975 6.9e-51 204.1 119 74.8
Medtr3g070890 Medicago truncatula HOM05D005616 ORTHO05D006975 9.0e-51 203.8 119 77.3
TWI09G1208 Tripterygium wilfordii HOM05D005616 ORTHO05D006975 9.0e-51 203.8 119 74.8
FvH4_4g21980 Fragaria vesca HOM05D005616 ORTHO05D006975 1.2e-50 203.4 119 76.5
FAN12G0831 Fragaria x ananassa HOM05D005616 ORTHO05D006975 1.2e-50 203.4 119 76.5
Sopen02g021670 Solanum pennellii HOM05D005616 ORTHO05D006975 1.2e-50 203.4 119 75.6
MSTRG.8961 Avicennia marina HOM05D005616 ORTHO05D006975 2.0e-50 202.6 130 70.8
Lsat_1_v5_gn_8_11701 Lactuca sativa HOM05D005616 ORTHO05D006975 2.0e-50 202.6 119 76.5
PSO339G0515 Papaver somniferum HOM05D005616 ORTHO05D006975 2.0e-50 202.6 119 73.1
Peaxi162Scf00801g00729 Petunia axillaris HOM05D005616 ORTHO05D006975 2.0e-50 202.6 119 77.3
PSO384G3782 Papaver somniferum HOM05D005616 ORTHO05D006975 4.5e-50 201.4 119 72.3
Medtr3g449480 Medicago truncatula HOM05D005616 ORTHO05D006975 5.8e-50 201.1 119 76.5
Sopen06g017380 Solanum pennellii HOM05D005616 ORTHO05D006975 5.8e-50 201.1 119 75.6
Psat5g129880 Pisum sativum HOM05D005616 ORTHO05D006975 7.6e-50 200.7 119 77.3
Potri.008G069500 Populus trichocarpa HOM05D005616 ORTHO05D006975 7.6e-50 200.7 125 72.0
PGSC0003DMG401008474 Solanum tuberosum HOM05D005616 ORTHO05D006975 1.3e-49 199.9 120 74.2
VMungo1383G1171 Vigna mungo HOM05D005616 ORTHO05D006975 2.9e-49 198.7 119 74.8
Duzib128G0549 Durio zibethinus HOM05D005616 ORTHO05D006975 3.8e-49 198.4 119 73.9
Potri.012G145600 Populus trichocarpa HOM05D005616 ORTHO05D006975 4.9e-49 198.0 125 70.4
Solyc06g051410.4 Solanum lycopersicum HOM05D005616 ORTHO05D006975 4.9e-49 198.0 119 74.8
SGA_v2.0_scaffold105G30487 Striga asiatica HOM05D005616 ORTHO05D006975 4.9e-49 198.0 119 73.1
PGR044G0338 Punica granatum HOM05D005616 ORTHO05D006975 6.4e-49 197.6 119 74.8
AUR62012260 Chenopodium quinoa HOM05D005616 ORTHO05D006975 8.4e-49 197.2 117 75.2
PSO017G0320 Papaver somniferum HOM05D005616 ORTHO05D006975 8.4e-49 197.2 119 72.3
PSO675G8834 Papaver somniferum HOM05D005616 ORTHO05D006975 8.4e-49 197.2 120 70.8
FvH4_7g24571 Fragaria vesca HOM05D005616 ORTHO05D006975 1.4e-48 196.4 119 74.8
FAN06G2993 Fragaria x ananassa HOM05D001932 ORTHO05D006975 1.4e-48 196.4 119 74.8
THA.LOC104816542 Tarenaya hassleriana HOM05D005616 ORTHO05D006975 1.4e-48 196.4 119 72.3
SGA_v2.0_scaffold60G21012 Striga asiatica HOM05D005616 ORTHO05D006975 1.9e-48 196.1 130 69.2
ClCG07G004280 Citrullus lanatus HOM05D005616 ORTHO05D006975 2.4e-48 195.7 119 73.9
MD07G1223000 Malus domestica HOM05D005616 ORTHO05D006975 2.4e-48 195.7 119 73.1
MELO3C026789.2 Cucumis melo HOM05D005616 ORTHO05D006975 4.2e-48 194.9 119 73.1
EL10Ac1g02124 Beta vulgaris HOM05D005616 ORTHO05D006975 7.1e-48 194.1 130 69.2
CANSAT78G1638 Cannabis sativa HOM05D005616 ORTHO05D006975 9.3e-48 193.7 119 71.4
Gohir.D10G249200 Gossypium hirsutum HOM05D005616 ORTHO05D006975 2.1e-47 192.6 116 74.1
Gorai.011G289500 Gossypium raimondii HOM05D005616 ORTHO05D006975 2.1e-47 192.6 116 74.1
Nitab4.5_0010803g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 2.7e-47 192.2 119 75.6
SalBow6G5046 Salvia bowleyana HOM05D005616 ORTHO05D006975 2.7e-47 192.2 130 69.2
CsaV3_5G010220 Cucumis sativus L. HOM05D005616 ORTHO05D006975 4.6e-47 191.4 119 70.6
Sed0025730 Sechium edule HOM05D005616 ORTHO05D006975 4.6e-47 191.4 119 71.4
MBI19_g36756_MAGBIO Magnolia biondii HOM05D005616 ORTHO05D006975 6.0e-47 191.0 119 69.7
Sabra08G0051100 Salix brachista HOM05D005616 ORTHO05D006975 6.0e-47 191.0 125 68.8
Aqoxy4G02536 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 7.9e-47 190.7 119 72.3
Aa31LG11G6640 Aethionema arabicum HOM05D005616 ORTHO05D006975 1.8e-46 189.5 119 69.7
AUR62022893 Chenopodium quinoa HOM05D005616 ORTHO05D006975 2.3e-46 189.1 117 72.6
Sc10g0002410 Simmondsia chinensis HOM05D005616 ORTHO05D006975 2.3e-46 189.1 130 66.2
Thhalv10014368m.g Eutrema salsugineum HOM05D005616 ORTHO05D006975 3.9e-46 188.3 119 70.6
Aqoxy5G03614 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 5.1e-46 188.0 119 70.6
AL6G15480 Arabidopsis lyrata HOM05D005616 ORTHO05D006975 1.1e-45 186.8 130 65.4
AT1G07780 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 1.9e-45 186.0 130 64.6
AT5G05590 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 1.9e-45 186.0 130 64.6
Carub.0006s0449 Capsella rubella HOM05D005616 ORTHO05D006975 2.5e-45 185.7 119 68.9
Hund13869 Selenicereus undatus HOM05D005616 ORTHO05D006975 3.3e-45 185.3 119 68.9
COL.COLO4_25743 Corchorus olitorius HOM05D005616 ORTHO05D006975 5.6e-45 184.5 103 77.7
Sp6g37270 Schrenkiella parvula HOM05D005616 ORTHO05D006975 7.4e-45 184.1 119 68.9
BraA02t04856Z Brassica rapa HOM05D005616 ORTHO05D006975 2.1e-44 182.6 119 68.9
CARHR034480 Cardamine hirsuta HOM05D005616 ORTHO05D006975 2.1e-44 182.6 130 65.4
CiPaw.02G193000 Carya illinoinensis HOM05D005616 ORTHO05D006975 2.1e-44 182.6 99 80.8
BcaB05g21694 Brassica carinata HOM05D005616 ORTHO05D006975 8.1e-44 180.6 119 68.9
BolC2t06207H Brassica oleracea HOM05D005616 ORTHO05D006975 1.4e-43 179.9 119 68.1
BcaB05g21698 Brassica carinata HOM05D005616 ORTHO05D006975 3.1e-43 178.7 119 67.2
Aqoxy332s005 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 4.5e-42 174.9 114 70.2
Gohir.D04G132700 Gossypium hirsutum HOM05D005616 ORTHO05D006975 5.8e-42 174.5 99 76.8
HPP92_011508 Vanilla planifolia HOM05D005616 ORTHO05D006975 3.8e-41 171.8 120 63.3
ATR0730G169 Amborella trichopoda HOM05D005616 ORTHO05D006975 1.2e-39 166.8 120 63.3
SHI03421 Sapria himalayana HOM05D005616 ORTHO05D006975 2.7e-39 165.6 119 62.2
Os02g0266000 Oryza sativa ssp. japonica HOM05D005616 ORTHO05D006975 6.0e-39 164.5 119 59.7
Zm00001eb203980 Zea mays HOM05D005616 ORTHO05D006975 1.5e-37 159.8 119 61.3
CDE02G4500 Ceratophyllum demersum HOM05D005293 ORTHO05D006764 2.1e-36 156.0 106 65.1
Zm00001eb281510 Zea mays HOM05D005616 ORTHO05D006975 1.8e-35 152.9 119 56.3
SEGI_33372 Sequoiadendron giganteum HOM05D005616 ORTHO05D006975 2.4e-35 152.5 118 58.5
unitig_0.g2023 Utricularia gibba HOM05D005616 ORTHO05D006975 4.1e-35 151.8 99 66.7
AUR62028615 Chenopodium quinoa HOM05D005616 ORTHO05D006975 2.6e-34 149.1 126 59.5
Pp3c17_23550 Physcomitrium patens HOM05D005616 ORTHO05D006975 5.7e-29 131.3 122 49.2
Mapoly0041s0067 Marchantia polymorpha HOM05D005616 ORTHO05D006975 1.4e-27 126.7 117 48.7
Cre12.g519000 Chlamydomonas reinhardtii HOM05D005616 ORTHO05D006975 1.8e-27 126.3 127 45.7
TAR369G1110 Trochodendron aralioides HOM05D005616 ORTHO05D006975 7.7e-26 120.9 67 79.1
AagrBONN_evm.TU.Sc2ySwM_228.1039 Anthoceros agrestis HOM05D005616 ORTHO05D006975 8.5e-25 117.5 118 44.1
CAN.G370.83 Capsicum annuum HOM05D002257 ORTHO05D006975 2.5e-24 115.9 65 78.5
SMO364G0619 Selaginella moellendorffii HOM05D005616 ORTHO05D006975 1.2e-23 113.6 124 46.0
PRCOL_00006470 Prasinoderma coloniale HOM05D005616 ORTHO05D006975 6.9e-19 97.8 127 38.6
MCO02G328 Micromonas commoda HOM05D005616 ORTHO05D006975 2.0e-18 96.3 146 30.8
Potri.014G188400 Populus trichocarpa HOM05D005616 ORTHO05D006975 4.2e-16 88.6 54 74.1
AT1G29410 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 7.4e-13 77.8 66 57.6
DCAR_029632 Daucus carota HOM05D000090 ORTHO05D001584 1.3e-12 77.0 44 77.3
C02p02440 Brassica napus HOM05D005616 ORTHO05D006975 1.1e-11 73.9 54 63.0
SGA_v2.0_scaffold250G44984 Striga asiatica HOM05D005616 ORTHO05D401959 6.5e-09 64.7 60 56.7
CiPaw.01G059100 Carya illinoinensis HOM05D005616 ORTHO05D006975 1.6e-07 60.1 32 78.1
SGA_v2.0_scaffold250G44986 Striga asiatica HOM05D005616 ORTHO05D403636 4.0e-06 55.5 32 68.8


User provided reference genes

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