Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv21729 Davidia involucrata HOM05D005402 ORTHO05D007036 3.1e-47 191.4 94 100.0
Dinv13911 Davidia involucrata HOM05D005402 ORTHO05D007036 3.2e-12 75.1 72 61.1
Dinv20063 Davidia involucrata HOM05D005402 ORTHO05D007036 3.6e-11 71.6 71 59.2
Lj2C266G9 Lonicera japonica HOM05D005402 ORTHO05D007036 4.6e-11 71.2 72 55.6
Actinidia11859 Actinidia chinensis HOM05D005402 ORTHO05D007036 2.3e-10 68.9 72 54.2
Hma1.2p1_0412F.1_g147300 Hydrangea macrophylla HOM05D005402 ORTHO05D007036 2.3e-10 68.9 72 55.6
Hund23456 Selenicereus undatus HOM05D005402 ORTHO05D007036 1.5e-09 66.2 71 53.5
EL10Ac3g06734 Beta vulgaris HOM05D005402 ORTHO05D007036 2.5e-09 65.5 100 43.0
AUR62032734 Chenopodium quinoa HOM05D005402 ORTHO05D007036 2.5e-09 65.5 79 48.1
CSS0005702 Camellia sinensis var. sinensis HOM05D005402 ORTHO05D007036 3.3e-09 65.1 100 48.0
TAR629G0778 Trochodendron aralioides HOM05D005402 ORTHO05D007036 4.3e-09 64.7 99 47.5
Manes.16G005300 Manihot esculenta HOM05D005402 ORTHO05D007036 9.7e-09 63.5 68 58.8
AUR62015290 Chenopodium quinoa HOM05D005402 ORTHO05D007036 1.7e-08 62.8 100 42.0
Medtr4g132340 Medicago truncatula HOM05D005402 ORTHO05D007036 2.2e-08 62.4 66 50.0
Phvul.003G080200 Phaseolus vulgaris HOM05D005402 ORTHO05D007036 3.7e-08 61.6 65 50.8
Sc05g0009280 Simmondsia chinensis HOM05D005402 ORTHO05D007036 3.7e-08 61.6 71 50.7
CiPaw.09G093500 Carya illinoinensis HOM05D005402 ORTHO05D007036 6.3e-08 60.8 69 53.6
Glyma.07G261900 Glycine max HOM05D005402 ORTHO05D007036 6.3e-08 60.8 65 50.8
vmacro15795 Vaccinium macrocarpon HOM05D005402 ORTHO05D007036 6.3e-08 60.8 72 48.6
arahy.Tifrunner.gnm1.ann1.I0ZCH2 Arachis hypogaea HOM05D005402 ORTHO05D007036 1.1e-07 60.1 69 53.6
Glyma.17G012200 Glycine max HOM05D005402 ORTHO05D007036 1.8e-07 59.3 65 50.8
Lj4g0015196 Lotus japonicus HOM05D005402 ORTHO05D007036 2.4e-07 58.9 65 49.2
VMungo1215G1509 Vigna mungo HOM05D005402 ORTHO05D007036 2.4e-07 58.9 65 49.2
arahy.Tifrunner.gnm1.ann1.T40CTJ Arachis hypogaea HOM05D005402 ORTHO05D007036 4.1e-07 58.2 69 52.2
QL05p072729 Quercus lobata HOM05D005402 ORTHO05D007036 4.1e-07 58.2 65 49.2
TPR.G36999 Trifolium pratense HOM05D005402 ORTHO05D007036 4.1e-07 58.2 65 49.2
Ca_21074_v3 Cicer arietinum L. HOM05D005402 ORTHO05D007036 5.3e-07 57.8 65 47.7
CsaV3_6G048920 Cucumis sativus L. HOM05D005402 ORTHO05D007036 5.3e-07 57.8 65 55.4
Lalb_Chr07g0177141 Lupinus albus HOM05D005402 ORTHO05D007036 5.3e-07 57.8 68 48.5
ClCG01G021860 Citrullus lanatus HOM05D005402 ORTHO05D007036 1.2e-06 56.6 69 49.3
DCAR_028193 Daucus carota HOM05D000001 ORTHO05D007036 1.2e-06 56.6 61 54.1
Psat4g006080 Pisum sativum HOM05D005402 ORTHO05D007036 1.5e-06 56.2 65 46.2
Haze_06819 Corylus avellana HOM05D005402 ORTHO05D007036 2.0e-06 55.8 69 50.7
Nn1g07183 Nelumbo nucifera HOM05D005402 ORTHO05D007036 2.0e-06 55.8 99 41.4
Sed0000438 Sechium edule HOM05D005402 ORTHO05D007036 2.0e-06 55.8 68 48.5
HanXRQChr15g0470411 Helianthus annuus HOM05D005402 ORTHO05D007036 3.4e-06 55.1 65 55.4
Prupe.4G224400 Prunus persica HOM05D005402 ORTHO05D007036 3.4e-06 55.1 74 50.0
Hma1.2p1_0660F.1_g197590 Hydrangea macrophylla HOM05D005402 ORTHO05D007036 4.5e-06 54.7 61 45.9
Ah.10g032740 Amaranthus hybridus HOM05D005402 ORTHO05D007036 5.9e-06 54.3 64 46.9
MELO3C007401.2 Cucumis melo HOM05D005402 ORTHO05D007036 7.7e-06 53.9 65 52.3
Nitab4.5_0000005g0240 Nicotiana tabacum HOM05D005402 ORTHO05D007036 7.7e-06 53.9 72 47.2


User provided reference genes

Program Settings