Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv21695 Davidia involucrata HOM05D012601 ORTHO05D011059 1.6e-269 932.2 479 100.0
Dinv28869 Davidia involucrata HOM05D012601 ORTHO05D011059 3.9e-114 416.0 386 63.2
Dinv15587 Davidia involucrata HOM05D012601 ORTHO05D011059 2.2e-93 347.1 313 63.9
Dinv27361 Davidia involucrata HOM05D012601 ORTHO05D011059 2.8e-80 303.5 307 59.9
Dinv38182 Davidia involucrata HOM05D000755 ORTHO05D011059 1.2e-78 298.1 319 58.3
Dinv00493 Davidia involucrata HOM05D012601 ORTHO05D001333 2.9e-77 293.5 275 62.5
Dinv07634 Davidia involucrata HOM05D012601 ORTHO05D011059 3.4e-73 280.0 307 57.0
Actinidia31496 Actinidia chinensis HOM05D012601 ORTHO05D011059 4.3e-60 236.5 400 44.8
CSS0003836 Camellia sinensis var. sinensis HOM05D009881 ORTHO05D011059 1.4e-55 221.5 404 42.1
Rhsim07G0119100 Rhododendron simsii HOM05D012601 ORTHO05D011059 7.3e-44 182.6 390 38.7
Dinv20044 Davidia involucrata HOM05D012601 ORTHO05D011059 3.4e-33 147.1 79 93.7
Nitab4.5_0012140g0020 Nicotiana tabacum HOM05D009881 ORTHO05D011059 8.4e-32 142.5 394 32.0
Nitab4.5_0000500g0180 Nicotiana tabacum HOM05D009881 ORTHO05D011059 4.1e-31 140.2 388 29.9
Oeu007318.1 Olea europaea HOM05D009881 ORTHO05D011059 4.6e-30 136.7 396 32.3
Solyc08g077950.1 Solanum lycopersicum HOM05D009881 ORTHO05D011059 4.3e-28 130.2 395 30.6
Sopen08g026460 Solanum pennellii HOM05D009881 ORTHO05D011059 2.8e-27 127.5 395 30.6
PGSC0003DMG400026589 Solanum tuberosum HOM05D009881 ORTHO05D011059 4.0e-26 123.6 389 31.6
Actinidia10863 Actinidia chinensis HOM05D012601 ORTHO05D011059 9.9e-25 119.0 300 35.3
CiPaw.11G070200 Carya illinoinensis HOM05D016577 ORTHO05D013291 1.3e-24 118.6 412 30.8
SGA_v2.0_scaffold69G23156 Striga asiatica HOM05D001352 ORTHO05D011059 1.7e-24 118.2 404 29.0
PGSC0003DMG400026223 Solanum tuberosum HOM05D009881 ORTHO05D011059 2.2e-24 117.9 398 29.1
Atru.chr9.1223 Acer truncatum HOM05D017588 ORTHO05D019396 1.4e-23 115.2 392 34.2
Nitab4.5_0003456g0060 Nicotiana tabacum HOM05D009881 ORTHO05D011059 3.2e-23 114.0 377 30.2
TAR375G0689 Trochodendron aralioides HOM05D012601 ORTHO05D011059 1.6e-22 111.7 508 27.8
Peaxi162Scf00544g00016 Petunia axillaris HOM05D009881 ORTHO05D011059 3.5e-22 110.5 392 30.4
Cc08_g11440 Coffea canephora HOM05D009881 ORTHO05D011059 2.3e-21 107.8 534 26.0
SGA_v2.0_scaffold104G30220 Striga asiatica HOM05D009881 ORTHO05D011059 3.3e-20 104.0 372 30.4
Ciclev10020707m.g Citrus clementina HOM05D017588 ORTHO05D019396 4.3e-20 103.6 420 29.3
Solyc12g099350.1 Solanum lycopersicum HOM05D009881 ORTHO05D011059 5.6e-20 103.2 400 27.2
ClCG10G002290 Citrullus lanatus HOM05D029038 ORTHO05D013291 2.8e-19 100.9 370 31.1
Nn6g33779 Nelumbo nucifera HOM05D020612 ORTHO05D013291 3.6e-19 100.5 407 27.0
SalBow6G1342 Salvia bowleyana HOM05D009881 ORTHO05D011059 1.8e-18 98.2 423 26.5
Sopen12g034020 Solanum pennellii HOM05D009881 ORTHO05D011059 1.8e-18 98.2 412 26.2
CANSAT21G0374 Cannabis sativa HOM05D018673 ORTHO05D020268 3.1e-18 97.4 394 33.2
MELO3C013903.2 Cucumis melo HOM05D029038 ORTHO05D013291 2.6e-17 94.4 358 31.6
MSTRG.11388 Avicennia marina HOM05D009881 ORTHO05D011059 6.4e-16 89.7 415 25.5
CsaV3_3G002330 Cucumis sativus L. HOM05D029038 ORTHO05D013291 1.4e-15 88.6 362 32.0
Lsat_1_v5_gn_4_15441 Lactuca sativa HOM05D009881 ORTHO05D011059 9.3e-15 85.9 357 28.0
QL12p008970 Quercus lobata HOM05D016577 ORTHO05D013291 1.6e-14 85.1 384 28.4
SGA_v2.0_scaffold69G23154 Striga asiatica HOM05D001103 ORTHO05D000954 4.6e-14 83.6 94 45.7
Cfa008664 Carpinus fangiana HOM05D016577 ORTHO05D013291 6.0e-14 83.2 373 27.6
ClCG00G001050 Citrullus lanatus HOM05D020612 ORTHO05D013291 6.7e-13 79.7 376 27.9
ClCG04G011020 Citrullus lanatus HOM05D020612 ORTHO05D013291 6.7e-13 79.7 376 27.9
Nitab4.5_0000506g0130 Nicotiana tabacum HOM05D009881 ORTHO05D011059 5.6e-12 76.6 321 29.0
Sed0026962 Sechium edule HOM05D029038 ORTHO05D013291 2.1e-11 74.7 356 28.1
Psat4g075400 Pisum sativum HOM05D012763 ORTHO05D015065 5.3e-10 70.1 384 26.6
Thecc.03G242200 Theobroma cacao HOM05D024389 ORTHO05D017870 2.0e-09 68.2 223 31.4
DCAR_008332 Daucus carota HOM05D009881 ORTHO05D011059 1.3e-08 65.5 125 33.6
Prupe.5G058200 Prunus persica HOM05D018673 ORTHO05D020268 2.9e-08 64.3 359 28.7
MELO3C002095.2 Cucumis melo HOM05D020612 ORTHO05D013291 6.4e-08 63.2 380 25.5
Sabra03G0053600 Salix brachista HOM05D017588 ORTHO05D019396 1.4e-07 62.0 209 33.0
Lalb_Chr20g0110081 Lupinus albus HOM05D034499 ORTHO05D014589 1.9e-07 61.6 370 28.6
Phvul.005G125832 Phaseolus vulgaris HOM05D022300 ORTHO05D014589 2.4e-07 61.2 369 26.8
Phvul.011G003700 Phaseolus vulgaris HOM05D022300 ORTHO05D014589 2.4e-07 61.2 376 27.1
SGA_v2.0_scaffold199G41246 Striga asiatica HOM05D001352 ORTHO05D011059 2.4e-07 61.2 80 43.8
Migut.I01098 Erythranthe guttata HOM05D009881 ORTHO05D011059 4.2e-07 60.5 378 26.5
ECA233G4060 Erigeron canadensis HOM05D009881 ORTHO05D011059 9.3e-07 59.3 145 33.8
Haze_11683 Corylus avellana HOM05D016577 ORTHO05D013291 1.6e-06 58.5 320 25.6
Ca_22009_v3 Cicer arietinum L. HOM05D012763 ORTHO05D015065 2.7e-06 57.8 330 27.3
Manes.01G087600 Manihot esculenta HOM05D017588 ORTHO05D019396 3.5e-06 57.4 352 27.0
Ah.12g054040 Amaranthus hybridus HOM05D028505 ORTHO05D026504 6.0e-06 56.6 407 23.3
Cfa018301 Carpinus fangiana HOM05D016577 ORTHO05D013291 6.0e-06 56.6 143 35.7
Potri.001G151601 Populus trichocarpa HOM05D017588 ORTHO05D019396 7.9e-06 56.2 147 34.0


User provided reference genes

Program Settings