Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 2.6e-72 275.4 153 100.0
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 9.1e-57 223.8 154 81.2
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 3.2e-54 215.3 153 79.1
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 5.5e-54 214.5 154 78.6
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 1.2e-53 213.4 156 76.3
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 2.1e-53 212.6 153 74.5
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 2.7e-53 212.2 150 75.3
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 1.8e-52 209.5 153 74.5
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 4.0e-52 208.4 146 75.3
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 1.5e-51 206.5 161 72.7
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 1.5e-51 206.5 154 74.0
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 4.4e-51 204.9 154 73.4
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 3.7e-50 201.8 157 71.3
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 4.8e-50 201.4 154 72.1
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 6.3e-50 201.1 148 75.0
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 8.3e-50 200.7 144 75.7
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 1.1e-49 200.3 144 78.5
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 1.1e-49 200.3 146 75.3
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 1.4e-49 199.9 139 77.0
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 1.8e-49 199.5 156 69.9
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 7.0e-49 197.6 146 74.7
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 7.0e-49 197.6 150 72.7
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 7.0e-49 197.6 150 72.7
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 7.0e-49 197.6 164 69.5
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 7.0e-49 197.6 139 76.3
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 9.1e-49 197.2 146 72.6
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 9.1e-49 197.2 145 73.8
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 9.1e-49 197.2 145 73.8
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 1.2e-48 196.8 134 77.6
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 2.0e-48 196.1 137 76.6
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 2.7e-48 195.7 143 76.2
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 4.5e-48 194.9 123 85.4
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 7.7e-48 194.1 149 72.5
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 5.0e-47 191.4 144 69.4
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 6.5e-47 191.0 145 69.7
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 8.5e-47 190.7 141 73.0
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 8.5e-47 190.7 148 71.6
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 1.1e-46 190.3 146 70.5
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 1.5e-46 189.9 145 70.3
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 5.5e-46 188.0 145 69.0
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 7.2e-46 187.6 149 71.1
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 7.2e-46 187.6 149 70.5
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 9.4e-46 187.2 145 70.3
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 9.4e-46 187.2 145 69.7
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 1.6e-45 186.4 146 68.5
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 2.1e-45 186.0 153 65.4
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 2.1e-45 186.0 150 69.3
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 2.7e-45 185.7 145 68.3
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 4.7e-45 184.9 136 75.0
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 4.7e-45 184.9 148 69.6
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 4.7e-45 184.9 145 69.7
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 1.8e-44 183.0 147 68.7
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 1.8e-44 183.0 148 66.2
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 1.8e-44 183.0 142 71.1
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 5.2e-44 181.4 149 65.8
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 8.8e-44 180.6 139 70.5
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 2.0e-43 179.5 145 66.2
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 4.4e-43 178.3 125 74.4
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 4.4e-43 178.3 143 69.2
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 4.4e-43 178.3 123 78.0
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 5.7e-43 177.9 137 67.9
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 9.8e-43 177.2 143 66.4
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 1.7e-42 176.4 208 53.4
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 1.7e-42 176.4 149 63.8
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 3.7e-42 175.3 148 64.2
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 4.9e-42 174.9 136 70.6
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 4.9e-42 174.9 121 76.9
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 6.3e-42 174.5 144 62.5
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 1.1e-41 173.7 109 84.4
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 1.1e-41 173.7 167 59.9
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 1.8e-41 172.9 148 62.2
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 2.4e-41 172.6 137 68.6
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 3.1e-41 172.2 144 65.3
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 4.1e-41 171.8 145 62.1
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 5.4e-41 171.4 148 61.5
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 5.4e-41 171.4 148 61.5
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 9.2e-41 170.6 154 64.9
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 1.6e-40 169.9 154 59.7
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 2.0e-40 169.5 113 77.9
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 7.7e-40 167.5 146 61.6
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 1.3e-39 166.8 128 68.0
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 2.9e-39 165.6 151 64.2
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 5.0e-39 164.9 124 71.0
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 6.6e-39 164.5 141 63.8
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 2.5e-38 162.5 128 66.4
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 2.5e-38 162.5 150 60.7
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 2.5e-38 162.5 161 57.1
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 4.3e-38 161.8 143 58.0
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 4.3e-38 161.8 143 58.0
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 4.3e-38 161.8 150 60.0
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 4.3e-38 161.8 150 60.0
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 4.3e-38 161.8 144 61.8
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 4.3e-38 161.8 144 62.5
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 5.6e-38 161.4 150 59.3
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 7.3e-38 161.0 150 60.0
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 9.5e-38 160.6 170 54.1
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 2.8e-37 159.1 128 67.2
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 3.6e-37 158.7 146 60.3
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 6.1e-37 157.9 134 65.7
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 8.0e-37 157.5 135 65.9
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 4.0e-36 155.2 179 50.8
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 4.0e-36 155.2 124 69.4
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 2.6e-35 152.5 134 62.7
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 3.4e-35 152.1 145 60.0
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 2.2e-34 149.4 110 75.5
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 3.7e-34 148.7 128 62.5
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 4.9e-34 148.3 128 60.2
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 6.4e-34 147.9 145 58.6
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 1.4e-33 146.7 128 63.3
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 4.1e-33 145.2 154 54.5
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 7.0e-33 144.4 113 72.6
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 7.8e-32 141.0 143 57.3
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 1.1e-30 137.1 107 69.2
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 1.9e-30 136.3 109 70.6
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 9.5e-30 134.0 303 36.3
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 2.1e-29 132.9 153 54.2
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 2.5e-22 109.4 70 82.9
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 4.3e-22 108.6 76 73.7
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 1.6e-21 106.7 97 63.9
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 1.5e-19 100.1 157 43.3
Oeu017208.1 Olea europaea HOM05D002196 ORTHO05D002565 9.8e-19 97.4 77 70.1
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.2e-16 90.5 134 45.5
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.6e-16 90.1 134 45.5
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 5.6e-14 81.6 137 42.3
MBI15_g37973_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 2.0e-11 73.2 68 61.8
Hma1.2p1_0871F.1_g231040 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 3.8e-10 68.9 62 66.1


User provided reference genes

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