Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 2.4e-110 402.1 200 100.0
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 6.5e-87 324.3 228 73.7
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 1.3e-84 316.6 228 71.9
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 1.3e-84 316.6 230 70.4
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 3.7e-82 308.5 234 68.8
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 3.7e-82 308.5 230 69.6
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 1.1e-81 307.0 231 69.7
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 5.0e-79 298.1 225 68.9
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 8.5e-79 297.4 241 66.0
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 1.9e-78 296.2 297 55.6
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 9.4e-78 293.9 273 59.0
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 1.6e-77 293.1 205 73.7
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 1.6e-77 293.1 228 68.4
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 2.7e-77 292.4 228 65.4
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 3.6e-77 292.0 223 67.3
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 1.0e-76 290.4 229 67.2
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 1.4e-76 290.0 235 66.0
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 3.9e-76 288.5 229 68.6
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 3.9e-76 288.5 226 66.4
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 5.1e-76 288.1 225 67.6
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 6.7e-76 287.7 229 67.2
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 8.8e-76 287.3 229 67.2
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 2.6e-75 285.8 226 66.8
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 3.3e-75 285.4 234 65.8
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 4.4e-75 285.0 225 66.7
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 7.4e-75 284.3 234 64.5
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 7.4e-75 284.3 224 67.0
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 9.7e-75 283.9 229 67.2
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 1.7e-74 283.1 231 64.5
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 2.2e-74 282.7 226 62.8
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 2.8e-74 282.3 227 66.1
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 4.8e-74 281.6 219 68.0
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 4.8e-74 281.6 227 66.5
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 4.8e-74 281.6 225 65.8
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 4.8e-74 281.6 229 65.5
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 6.3e-74 281.2 226 63.3
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 8.2e-74 280.8 226 65.0
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 1.4e-73 280.0 233 62.7
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 1.8e-73 279.6 226 64.6
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 2.4e-73 279.3 222 64.9
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 4.1e-73 278.5 237 65.8
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 9.1e-73 277.3 243 61.7
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 1.5e-72 276.6 230 63.5
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 2.0e-72 276.2 229 64.2
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 2.0e-72 276.2 222 64.0
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 1.0e-71 273.9 223 65.0
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 2.9e-71 272.3 223 65.0
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 2.9e-71 272.3 223 65.0
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 3.8e-71 271.9 222 64.0
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 3.8e-71 271.9 223 64.6
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 6.5e-71 271.2 222 64.4
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 1.1e-70 270.4 223 65.0
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 4.2e-70 268.5 228 61.8
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 4.2e-70 268.5 222 61.7
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 5.5e-70 268.1 224 61.2
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 5.5e-70 268.1 231 62.8
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 5.5e-70 268.1 229 63.3
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 5.5e-70 268.1 218 62.8
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 5.5e-70 268.1 262 55.7
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 7.2e-70 267.7 233 61.4
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 1.6e-69 266.5 222 63.1
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 1.6e-69 266.5 228 61.8
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 1.6e-69 266.5 221 64.3
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 2.1e-69 266.2 242 60.3
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 2.1e-69 266.2 223 63.7
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.7e-69 265.8 227 62.6
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 4.7e-69 265.0 221 63.3
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 4.7e-69 265.0 220 63.6
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 6.1e-69 264.6 225 61.8
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 3.0e-68 262.3 226 61.5
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 3.9e-68 261.9 226 61.5
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 8.8e-68 260.8 215 64.7
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 1.5e-67 260.0 224 62.5
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 2.6e-67 259.2 225 61.8
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 3.3e-67 258.8 221 63.3
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 1.3e-66 256.9 228 60.5
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.7e-66 256.5 234 59.4
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 4.8e-66 255.0 223 60.5
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 1.8e-65 253.1 221 61.5
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 2.4e-65 252.7 182 68.7
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.4e-65 252.7 234 58.5
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 3.1e-65 252.3 178 70.8
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 5.3e-65 251.5 202 64.4
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 7.0e-65 251.1 226 58.8
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 1.6e-64 250.0 233 57.5
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 2.0e-64 249.6 252 55.6
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 4.5e-64 248.4 290 51.4
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 3.8e-63 245.4 228 54.8
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 1.9e-62 243.0 184 64.7
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 1.0e-60 237.3 195 61.0
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 1.5e-59 233.4 229 54.1
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 2.4e-57 226.1 195 62.6
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 1.2e-56 223.8 221 54.3
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 7.2e-54 214.5 163 65.6
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 4.7e-53 211.8 242 50.0
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 5.2e-52 208.4 188 53.7
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 8.8e-52 207.6 179 58.7
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 2.0e-51 206.5 379 37.2
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 3.1e-49 199.1 185 57.8
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 5.0e-47 191.8 183 57.9
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 4.0e-44 182.2 184 48.9
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 1.5e-38 163.7 152 63.2
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 2.1e-37 159.8 192 42.2
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 2.3e-36 156.4 106 78.3
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 1.2e-29 134.0 110 61.8
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 1.2e-29 134.0 110 61.8
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 3.1e-28 129.4 220 32.7
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 3.7e-26 122.5 157 47.8
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 3.7e-26 122.5 152 50.7
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 4.9e-26 122.1 99 66.7
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 8.3e-26 121.3 180 45.6
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 1.1e-25 120.9 192 37.5
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 1.9e-22 110.2 120 55.8
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 1.2e-21 107.5 77 66.2
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 1.2e-21 107.5 82 64.6
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 4.4e-19 99.0 136 45.6
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 1.3e-18 97.4 96 59.4
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 1.1e-17 94.4 136 44.1
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 5.6e-14 82.0 96 52.1
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 3.1e-12 76.3 172 32.0
Sabra01G0094400 Salix brachista HOM05D006632 ORTHO05D008224 6.8e-12 75.1 48 68.8


User provided reference genes

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