Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv21586 Davidia involucrata HOM05D007051 ORTHO05D008842 1.5e-125 453.0 243 100.0
CSS0029957 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 5.6e-101 371.3 244 82.4
CSS0034738 Camellia sinensis var. sinensis HOM05D007051 ORTHO05D008842 2.8e-100 369.0 244 82.0
Hma1.2p1_1868F.1_g305950 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 9.0e-99 364.0 244 81.6
CiPaw.12G105800 Carya illinoinensis HOM05D007051 ORTHO05D008842 4.2e-96 355.1 243 80.7
QL12p014185 Quercus lobata HOM05D007051 ORTHO05D008842 1.7e-94 349.7 240 78.8
Actinidia27438 Actinidia chinensis HOM05D007051 ORTHO05D008842 8.7e-94 347.4 237 79.7
Prupe.5G077000 Prunus persica HOM05D007051 ORTHO05D008842 2.4e-91 339.3 242 76.9
TAR629G3399 Trochodendron aralioides HOM05D007051 ORTHO05D008842 4.0e-91 338.6 241 77.2
PGR031G0283 Punica granatum HOM05D007051 ORTHO05D008842 2.6e-90 335.9 241 74.3
Ciclev10021945m.g Citrus clementina HOM05D007051 ORTHO05D008842 4.5e-90 335.1 242 75.6
Atru.chr9.1399 Acer truncatum HOM05D007051 ORTHO05D008842 5.8e-90 334.7 243 75.3
GSVIVG01006029001 Vitis vinifera HOM05D007051 ORTHO05D008842 1.1e-88 330.5 241 75.1
Duzib205G0440 Durio zibethinus HOM05D007051 ORTHO05D008842 3.2e-88 328.9 240 74.2
Manes.01G074700 Manihot esculenta HOM05D007051 ORTHO05D008842 5.4e-88 328.2 241 73.0
Eucgr.D02017 Eucalyptus grandis HOM05D007051 ORTHO05D008842 7.1e-88 327.8 242 72.3
MD04G1081100 Malus domestica HOM05D007051 ORTHO05D008842 1.2e-87 327.0 243 73.7
CANSAT21G0170 Cannabis sativa HOM05D007051 ORTHO05D008842 2.7e-87 325.9 244 73.8
Lj2g0024450 Lotus japonicus HOM05D007051 ORTHO05D008842 4.6e-87 325.1 242 71.1
ClCG01G003730 Citrullus lanatus HOM05D007051 ORTHO05D008842 1.0e-86 323.9 241 72.2
Lsat_1_v5_gn_3_2541 Lactuca sativa HOM05D007051 ORTHO05D008842 6.7e-86 321.2 249 70.3
Haze_08593 Corylus avellana HOM05D007051 ORTHO05D008842 1.1e-85 320.5 220 80.5
FAN08G0417 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.5e-85 320.1 242 72.7
FAN18G1307 Fragaria x ananassa HOM05D007051 ORTHO05D008842 1.5e-85 320.1 242 72.7
Potri.001G119100 Populus trichocarpa HOM05D007051 ORTHO05D008842 4.3e-85 318.5 226 75.2
FAN04G1713 Fragaria x ananassa HOM05D007051 ORTHO05D008842 5.6e-85 318.2 242 73.1
Glyma.11G030400 Glycine max HOM05D007051 ORTHO05D008842 5.6e-85 318.2 242 70.7
TWI60G1677 Tripterygium wilfordii HOM05D007051 ORTHO05D008842 5.6e-85 318.2 243 72.0
MELO3C005568.2 Cucumis melo HOM05D007051 ORTHO05D008842 9.6e-85 317.4 241 71.8
SGA_v2.0_scaffold120G32840 Striga asiatica HOM05D007051 ORTHO05D008842 2.1e-84 316.2 232 72.8
arahy.Tifrunner.gnm1.ann1.2BY1CI Arachis hypogaea HOM05D007051 ORTHO05D008842 2.8e-84 315.8 244 71.3
Ca_06694_v3 Cicer arietinum L. HOM05D007051 ORTHO05D008842 3.7e-84 315.5 241 70.5
FAN13G2377 Fragaria x ananassa HOM05D007051 ORTHO05D008842 3.7e-84 315.5 252 71.4
vmacro14055 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 4.8e-84 315.1 208 79.8
Cc08_g13070 Coffea canephora HOM05D007051 ORTHO05D008842 1.8e-83 313.2 232 71.6
Sabra01G0092000 Salix brachista HOM05D007051 ORTHO05D008842 1.8e-83 313.2 225 74.2
arahy.Tifrunner.gnm1.ann1.BK8PZK Arachis hypogaea HOM05D007051 ORTHO05D008842 2.4e-83 312.8 244 70.9
Gohir.A11G020000 Gossypium hirsutum HOM05D007051 ORTHO05D008842 2.4e-83 312.8 240 71.7
Sc01g0009270 Simmondsia chinensis HOM05D007051 ORTHO05D008842 2.4e-83 312.8 220 75.5
CsaV3_5G003870 Cucumis sativus L. HOM05D007051 ORTHO05D008842 2.6e-82 309.3 241 70.1
Nitab4.5_0004482g0060 Nicotiana tabacum HOM05D007051 ORTHO05D008842 2.6e-82 309.3 247 68.8
Nn6g34078 Nelumbo nucifera HOM05D007051 ORTHO05D008842 7.6e-82 307.8 208 77.4
Nitab4.5_0010733g0020 Nicotiana tabacum HOM05D007051 ORTHO05D008842 7.6e-82 307.8 247 68.8
THA.LOC104809449 Tarenaya hassleriana HOM05D007051 ORTHO05D008842 7.6e-82 307.8 216 75.5
DCAR_006807 Daucus carota HOM05D007051 ORTHO05D008842 1.3e-81 307.0 240 67.1
Gohir.D11G019700 Gossypium hirsutum HOM05D007051 ORTHO05D008842 1.7e-81 306.6 238 70.6
Gorai.007G021000 Gossypium raimondii HOM05D007051 ORTHO05D008842 2.2e-81 306.2 240 70.4
SalBow6G1069 Salvia bowleyana HOM05D007051 ORTHO05D008842 2.2e-81 306.2 243 69.1
Solyc08g079240.4 Solanum lycopersicum HOM05D007051 ORTHO05D008842 2.2e-81 306.2 247 68.8
ATR0665G189 Amborella trichopoda HOM05D007051 ORTHO05D008842 3.8e-81 305.4 220 71.8
Migut.A00866 Erythranthe guttata HOM05D007051 ORTHO05D008842 3.8e-81 305.4 243 68.7
Sopen08g027680 Solanum pennellii HOM05D007051 ORTHO05D008842 3.8e-81 305.4 247 68.8
Medtr5g011990 Medicago truncatula HOM05D007051 ORTHO05D008842 1.1e-80 303.9 248 68.1
unitig_699.g19761 Utricularia gibba HOM05D001703 ORTHO05D007194 3.2e-80 302.4 206 76.7
Peaxi162Scf00002g00416 Petunia axillaris HOM05D007051 ORTHO05D008842 4.2e-80 302.0 247 66.4
FvH4_5g00440 Fragaria vesca HOM05D007051 ORTHO05D008842 7.1e-80 301.2 204 79.4
Oeu024055.1 Olea europaea HOM05D007051 ORTHO05D008842 1.2e-79 300.4 231 71.0
CAN.G1337.17 Capsicum annuum HOM05D007051 ORTHO05D008842 6.0e-79 298.1 246 67.1
MSTRG.12072 Avicennia marina HOM05D007051 ORTHO05D008842 1.0e-78 297.4 243 67.5
Aa31LG2G320 Aethionema arabicum HOM05D007051 ORTHO05D008842 1.3e-78 297.0 240 68.3
AL2G13010 Arabidopsis lyrata HOM05D007051 ORTHO05D008842 1.3e-78 297.0 240 67.9
CDE02G0603 Ceratophyllum demersum HOM05D007051 ORTHO05D008842 3.9e-78 295.4 227 70.0
PGSC0003DMG400004734 Solanum tuberosum HOM05D007051 ORTHO05D008842 6.7e-78 294.7 247 67.2
VMungo1215G1548 Vigna mungo HOM05D007051 ORTHO05D008842 6.7e-78 294.7 242 66.1
AUR62007459 Chenopodium quinoa HOM05D007051 ORTHO05D008842 8.7e-78 294.3 217 71.4
AT1G62780 Arabidopsis thaliana HOM05D007051 ORTHO05D008842 2.5e-77 292.7 241 65.6
Psat2g179120 Pisum sativum HOM05D007051 ORTHO05D008842 4.3e-77 292.0 218 69.7
C09p19230 Brassica napus HOM05D007051 ORTHO05D008842 5.6e-77 291.6 244 66.8
Thhalv10023664m.g Eutrema salsugineum HOM05D007051 ORTHO05D008842 7.4e-77 291.2 244 67.2
A09p15970 Brassica napus HOM05D007051 ORTHO05D008842 9.6e-77 290.8 244 66.8
BraA09t37232Z Brassica rapa HOM05D007051 ORTHO05D008842 9.6e-77 290.8 244 66.8
AUR62039918 Chenopodium quinoa HOM05D007051 ORTHO05D008842 9.6e-77 290.8 217 71.0
RcHm_v2.0_Chr7g0202061 Rosa chinensis HOM05D007051 ORTHO05D008842 9.6e-77 290.8 242 66.9
Sp2g01860 Schrenkiella parvula HOM05D007051 ORTHO05D008842 9.6e-77 290.8 244 66.4
BcaC04g22447 Brassica carinata HOM05D007051 ORTHO05D008842 1.3e-76 290.4 244 66.4
CARHR049060 Cardamine hirsuta HOM05D007051 ORTHO05D008842 2.8e-76 289.3 240 66.7
Phvul.002G060700 Phaseolus vulgaris HOM05D007051 ORTHO05D008842 3.7e-76 288.9 242 65.7
BcaB07g31359 Brassica carinata HOM05D007051 ORTHO05D008842 8.2e-76 287.7 244 66.0
BolC9t54830H Brassica oleracea HOM05D007051 ORTHO05D008842 8.2e-76 287.7 244 66.4
PSO675G3044 Papaver somniferum HOM05D007051 ORTHO05D008842 3.1e-75 285.8 236 63.6
PSO717G0094 Papaver somniferum HOM05D007051 ORTHO05D008842 4.0e-75 285.4 236 63.6
Hund11573 Selenicereus undatus HOM05D007051 ORTHO05D008842 5.8e-74 281.6 228 67.5
MBI04_g42034_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 1.0e-73 280.8 235 64.7
Zm00001eb300480 Zea mays HOM05D007051 ORTHO05D008842 1.0e-73 280.8 214 67.8
Lalb_Chr09g0324461 Lupinus albus HOM05D007051 ORTHO05D008842 1.3e-73 280.4 213 67.6
Os04g0105700 Oryza sativa ssp. japonica HOM05D007051 ORTHO05D008842 1.9e-72 276.6 222 65.3
Aqoxy7G00687 Aquilegia oxysepala HOM05D007051 ORTHO05D008842 5.5e-72 275.0 214 68.7
Carub.0002s0220 Capsella rubella HOM05D007051 ORTHO05D008842 4.6e-71 271.9 252 62.3
MBI04_g32270_MAGBIO Magnolia biondii HOM05D007051 ORTHO05D008842 4.6e-71 271.9 233 64.8
Sed0010491 Sechium edule HOM05D007051 ORTHO05D008842 1.8e-70 270.0 237 62.4
HanXRQChr17g0549011 Helianthus annuus HOM05D007051 ORTHO05D008842 1.1e-69 267.3 249 60.2
ECA246G0398 Erigeron canadensis HOM05D007051 ORTHO05D008842 1.5e-69 266.9 221 64.3
Hma1.2p1_1868F.1_g305940 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 9.0e-67 257.7 174 79.9
Thecc.03G259200 Theobroma cacao HOM05D007051 ORTHO05D008842 1.2e-63 247.3 190 71.6
SEGI_34604 Sequoiadendron giganteum HOM05D007051 ORTHO05D008842 6.1e-63 245.0 212 62.7
HPP92_015062 Vanilla planifolia HOM05D007051 ORTHO05D008842 3.0e-62 242.7 223 59.2
TPR.G820 Trifolium pratense HOM05D007051 ORTHO05D008842 2.8e-60 236.1 247 59.5
Pp3c10_11840 Physcomitrium patens HOM05D007051 ORTHO05D008842 1.1e-59 234.2 219 56.6
AagrBONN_evm.TU.Sc2ySwM_362.1892 Anthoceros agrestis HOM05D007051 ORTHO05D008842 1.2e-55 220.7 206 57.3
SMO367G0716 Selaginella moellendorffii HOM05D007051 ORTHO05D008842 5.9e-50 201.8 227 50.2
Glyma.01G211400 Glycine max HOM05D007051 ORTHO05D008842 1.5e-40 170.6 157 64.3
Duzib084G0812 Durio zibethinus HOM05D007051 ORTHO05D008842 5.5e-40 168.7 150 63.3
Mapoly0062s0102 Marchantia polymorpha HOM05D007051 ORTHO05D008842 9.7e-37 157.9 226 44.7
Hma1.2p1_2244F.1_g317930 Hydrangea macrophylla HOM05D007051 ORTHO05D008842 2.4e-35 153.3 99 83.8
Cpa.g.sc29.111 Carica papaya HOM05D007051 ORTHO05D008842 5.3e-35 152.1 118 70.3
Cre13.g579550 Chlamydomonas reinhardtii HOM05D007051 ORTHO05D008842 1.5e-29 134.0 221 41.6
EL10Ac5g12994 Beta vulgaris HOM05D007051 ORTHO05D008842 3.1e-27 126.3 101 66.3
vmacro16051 Vaccinium macrocarpon HOM05D007051 ORTHO05D008842 2.7e-26 123.2 102 71.6
PRCOL_00000809 Prasinoderma coloniale HOM05D007051 ORTHO05D008842 1.1e-16 91.3 209 32.5
arahy.Tifrunner.gnm1.ann1.VE7KXP Arachis hypogaea HOM05D007051 ORTHO05D008842 1.1e-11 74.7 66 60.6
MCO02G329 Micromonas commoda HOM05D007051 ORTHO05D008842 1.9e-11 73.9 156 32.7
Oeu056087.1 Olea europaea HOM05D007051 ORTHO05D008842 2.7e-10 70.1 52 69.2
Glyma.05G077300 Glycine max HOM05D007051 ORTHO05D008842 4.3e-08 62.8 46 69.6


User provided reference genes

Program Settings