Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv21433 Davidia involucrata HOM05D006720 ORTHO05D008333 2.2e-108 395.6 195 100.0
Dinv23264 Davidia involucrata HOM05D006720 ORTHO05D008333 5.0e-76 288.1 189 77.8
CSS0010698 Camellia sinensis var. sinensis HOM05D006720 ORTHO05D008333 2.6e-72 275.8 191 73.8
Hma1.2p1_0329F.1_g127340 Hydrangea macrophylla HOM05D006720 ORTHO05D008333 1.6e-69 266.5 206 67.0
Lj5C82T14 Lonicera japonica HOM05D006720 ORTHO05D008333 1.7e-68 263.1 209 66.5
vmacro16839 Vaccinium macrocarpon HOM05D006720 ORTHO05D008333 8.0e-66 254.2 208 65.4
CSS0024292 Camellia sinensis var. sinensis HOM05D006720 ORTHO05D008333 2.6e-64 249.2 180 71.1
Actinidia08931 Actinidia chinensis HOM05D006720 ORTHO05D008333 5.7e-64 248.1 191 69.1
Nn8g40120 Nelumbo nucifera HOM05D006720 ORTHO05D008333 8.3e-63 244.2 216 62.5
Rhsim12G0184400 Rhododendron simsii HOM05D006720 ORTHO05D008333 9.2e-62 240.7 197 65.0
Sabra01G0028300 Salix brachista HOM05D006720 ORTHO05D008333 8.6e-60 234.2 202 59.4
Cfa001847 Carpinus fangiana HOM05D006720 ORTHO05D008333 8.0e-58 227.6 210 59.5
Cc04_g05350 Coffea canephora HOM05D006720 ORTHO05D008333 8.0e-58 227.6 215 57.7
Thecc.06G048000 Theobroma cacao HOM05D006720 ORTHO05D008333 1.3e-55 220.3 214 57.0
CsaV3_7G031740 Cucumis sativus L. HOM05D006720 ORTHO05D008333 1.7e-55 219.9 213 55.4
QL05p037203 Quercus lobata HOM05D006720 ORTHO05D008333 2.9e-55 219.2 212 60.4
Potri.001G041400 Populus trichocarpa HOM05D006720 ORTHO05D008333 3.7e-55 218.8 203 58.6
GSVIVG01016095001 Vitis vinifera HOM05D006720 ORTHO05D008333 6.4e-55 218.0 195 62.6
Duzib235G0030 Durio zibethinus HOM05D006720 ORTHO05D008333 2.4e-54 216.1 214 56.1
Prupe.3G104500 Prunus persica HOM05D006720 ORTHO05D008333 2.4e-54 216.1 215 57.2
Manes.04G100600 Manihot esculenta HOM05D006720 ORTHO05D008333 5.4e-54 214.9 195 56.4
Peaxi162Scf00314g01027 Petunia axillaris HOM05D006720 ORTHO05D008333 7.0e-54 214.5 201 60.7
Haze_16697 Corylus avellana HOM05D006720 ORTHO05D008333 9.2e-54 214.2 201 57.7
PGR031G3965 Punica granatum HOM05D006720 ORTHO05D008333 1.2e-53 213.8 210 56.7
MD09G1228600 Malus domestica HOM05D006720 ORTHO05D008333 1.6e-53 213.4 221 57.9
Lsat_1_v5_gn_4_84960 Lactuca sativa HOM05D006720 ORTHO05D008333 6.0e-53 211.5 197 59.9
Nitab4.5_0002700g0050 Nicotiana tabacum HOM05D006720 ORTHO05D008333 1.0e-52 210.7 207 58.5
Eucgr.J03133 Eucalyptus grandis HOM05D006720 ORTHO05D008333 2.3e-52 209.5 202 56.4
Oeu036708.3 Olea europaea HOM05D001135 ORTHO05D008333 2.3e-52 209.5 202 58.4
Gohir.A05G117100 Gossypium hirsutum HOM05D006720 ORTHO05D008333 8.6e-52 207.6 212 54.7
CANSAT64G1752 Cannabis sativa HOM05D006720 ORTHO05D008333 1.1e-51 207.2 221 54.8
Gorai.009G121900 Gossypium raimondii HOM05D006720 ORTHO05D008333 1.9e-51 206.5 212 54.2
PGSC0003DMG400014215 Solanum tuberosum HOM05D006720 ORTHO05D008333 1.9e-51 206.5 213 55.4
Gohir.D05G118000 Gossypium hirsutum HOM05D006720 ORTHO05D008333 2.5e-51 206.1 212 54.2
SGA_v2.0_scaffold5G02836 Striga asiatica HOM05D006720 ORTHO05D008333 9.5e-51 204.1 206 54.4
COL.COLO4_26788 Corchorus olitorius HOM05D006720 ORTHO05D008333 1.6e-50 203.4 215 53.5
MBI15_g26073_MAGBIO Magnolia biondii HOM05D006720 ORTHO05D008333 1.6e-50 203.4 205 57.6
Sopen03g036640 Solanum pennellii HOM05D006720 ORTHO05D008333 2.1e-50 203.0 210 55.2
SalBow7G4111 Salvia bowleyana HOM05D006720 ORTHO05D008333 3.6e-50 202.2 200 53.0
MELO3C023483.2 Cucumis melo HOM05D006720 ORTHO05D008333 4.7e-50 201.8 211 53.1
TAR383G0893 Trochodendron aralioides HOM05D006720 ORTHO05D008333 4.7e-50 201.8 160 63.8
Atru.chr1.2814 Acer truncatum HOM05D006720 ORTHO05D008333 6.2e-50 201.4 232 50.4
Solyc03g117730.3 Solanum lycopersicum HOM05D006720 ORTHO05D008333 8.1e-50 201.1 205 57.6
MD17G1227000 Malus domestica HOM05D006720 ORTHO05D008333 1.4e-49 200.3 217 53.5
AUR62033006 Chenopodium quinoa HOM05D006720 ORTHO05D008333 5.2e-49 198.4 216 53.2
Ciclev10026193m.g Citrus clementina HOM05D006720 ORTHO05D008333 5.2e-49 198.4 230 48.3
PSO017G2116 Papaver somniferum HOM05D006720 ORTHO05D008333 5.2e-49 198.4 229 51.5
ClCG09G003460 Citrullus lanatus HOM05D006720 ORTHO05D008333 8.9e-49 197.6 196 54.6
Lalb_Chr14g0376131 Lupinus albus HOM05D006720 ORTHO05D008333 8.9e-49 197.6 205 53.2
Nitab4.5_0004738g0030 Nicotiana tabacum HOM05D006720 ORTHO05D008333 2.0e-48 196.4 206 55.8
MSTRG.11219 Avicennia marina HOM05D006720 ORTHO05D008333 3.4e-48 195.7 210 53.3
EL10Ac8g19413 Beta vulgaris HOM05D006720 ORTHO05D008333 3.4e-48 195.7 215 52.1
TWI12G1459 Tripterygium wilfordii HOM05D006720 ORTHO05D008333 4.4e-48 195.3 208 56.2
AUR62034065 Chenopodium quinoa HOM05D006720 ORTHO05D008333 5.8e-48 194.9 216 50.9
DCAR_025536 Daucus carota HOM05D006720 ORTHO05D008333 7.5e-48 194.5 202 55.4
PSO170G6385 Papaver somniferum HOM05D006720 ORTHO05D008333 2.2e-47 193.0 229 50.2
ECA232G3089 Erigeron canadensis HOM05D006720 ORTHO05D008333 1.4e-46 190.3 199 53.8
FAN05G2916 Fragaria x ananassa HOM05D006720 ORTHO05D008333 2.4e-46 189.5 212 52.4
RcHm_v2.0_Chr2g0132241 Rosa chinensis HOM05D006720 ORTHO05D008333 4.1e-46 188.7 208 54.3
Sed0009506 Sechium edule HOM05D006720 ORTHO05D008333 4.1e-46 188.7 193 52.8
Hund06712 Selenicereus undatus HOM05D006720 ORTHO05D008333 7.1e-46 188.0 197 53.3
FAN02G3506 Fragaria x ananassa HOM05D006720 ORTHO05D008333 9.2e-46 187.6 212 52.8
CiPaw.02G163900 Carya illinoinensis HOM05D006720 ORTHO05D008333 2.1e-45 186.4 120 74.2
HanXRQChr09g0274211 Helianthus annuus HOM05D006720 ORTHO05D008333 4.6e-45 185.3 179 55.9
FvH4_6g28190 Fragaria vesca HOM05D006720 ORTHO05D008333 1.3e-44 183.7 212 52.4
FAN14G1194 Fragaria x ananassa HOM05D006720 ORTHO05D008333 5.1e-44 181.8 212 51.9
CAN.G1008.11 Capsicum annuum HOM05D006720 ORTHO05D008333 3.3e-43 179.1 203 54.2
Ah.09g231790 Amaranthus hybridus HOM05D001135 ORTHO05D001005 7.3e-43 177.9 223 46.6
Aqoxy7G02333 Aquilegia oxysepala HOM05D006720 ORTHO05D008333 1.6e-42 176.8 233 48.1
Migut.I00629 Erythranthe guttata HOM05D006720 ORTHO05D008333 3.6e-42 175.6 216 48.6
Manes.11G069900 Manihot esculenta HOM05D006720 ORTHO05D008333 3.8e-39 165.6 163 56.4
arahy.Tifrunner.gnm1.ann1.597RPM Arachis hypogaea HOM05D006720 ORTHO05D008333 1.9e-38 163.3 210 48.6
arahy.Tifrunner.gnm1.ann1.HE2FXA Arachis hypogaea HOM05D006720 ORTHO05D008333 1.9e-38 163.3 210 48.6
Lj3g0009177 Lotus japonicus HOM05D006720 ORTHO05D008333 4.6e-37 158.7 114 67.5
Ca_01005_v3 Cicer arietinum L. HOM05D006720 ORTHO05D008333 7.8e-37 157.9 161 53.4
Phvul.005G183800 Phaseolus vulgaris HOM05D006720 ORTHO05D008333 3.0e-36 156.0 180 49.4
Psat5g308240 Pisum sativum HOM05D006720 ORTHO05D008333 1.1e-35 154.1 173 50.9
VMungo1080G1475 Vigna mungo HOM05D006720 ORTHO05D008333 1.5e-35 153.7 180 50.0
CDE05G1675 Ceratophyllum demersum HOM05D006720 ORTHO05D008333 7.3e-35 151.4 199 47.2
Aa31LG7G640 Aethionema arabicum HOM05D006720 ORTHO05D008333 4.7e-34 148.7 108 63.0
Thhalv10007810m.g Eutrema salsugineum HOM05D006720 ORTHO05D008333 1.8e-33 146.7 119 59.7
AL1G28230 Arabidopsis lyrata HOM05D006720 ORTHO05D008333 2.4e-33 146.4 160 48.1
THA.LOC104812423 Tarenaya hassleriana HOM05D006720 ORTHO05D008333 3.1e-33 146.0 139 52.5
Sp1g14380 Schrenkiella parvula HOM05D006720 ORTHO05D008333 9.0e-33 144.4 119 58.0
FAN09G3415 Fragaria x ananassa HOM05D006720 ORTHO05D008333 1.2e-32 144.1 201 47.3
AT1G16070 Arabidopsis thaliana HOM05D006720 ORTHO05D008333 1.5e-32 143.7 160 48.1
CARHR016580 Cardamine hirsuta HOM05D006720 ORTHO05D008333 3.4e-32 142.5 160 48.1
Carub.0001s1587 Capsella rubella HOM05D006720 ORTHO05D008333 7.6e-32 141.4 119 56.3
BcaC05g25606 Brassica carinata HOM05D006720 ORTHO05D008333 9.9e-32 141.0 128 55.5
C05p14260 Brassica napus HOM05D006720 ORTHO05D008333 9.9e-32 141.0 128 55.5
BolC5t30158H Brassica oleracea HOM05D006720 ORTHO05D008333 9.9e-32 141.0 128 55.5
A06p12090 Brassica napus HOM05D006720 ORTHO05D008333 1.3e-31 140.6 128 55.5
BraA06t24378Z Brassica rapa HOM05D006720 ORTHO05D008333 1.3e-31 140.6 128 55.5
SEGI_19282 Sequoiadendron giganteum HOM05D006720 ORTHO05D008333 2.9e-31 139.4 213 43.7
CDE02G1676 Ceratophyllum demersum HOM05D006720 ORTHO05D008333 9.3e-30 134.4 187 46.0
Medtr2g105390 Medicago truncatula HOM05D006720 ORTHO05D008333 1.1e-27 127.5 177 44.6
Zm00001eb233920 Zea mays HOM05D006720 ORTHO05D008333 1.8e-25 120.2 111 59.5
Glyma.13G371500 Glycine max HOM05D006720 ORTHO05D008333 3.1e-25 119.4 133 48.9
Rhsim12G0184300 Rhododendron simsii HOM05D006720 ORTHO05D008333 9.0e-25 117.9 125 54.4
Os02g0179400 Oryza sativa ssp. japonica HOM05D006720 ORTHO05D008333 7.6e-24 114.8 78 69.2
HPP92_003070 Vanilla planifolia HOM05D006720 ORTHO05D008333 3.8e-23 112.5 123 52.8
SGA_v2.0_scaffold382G50398 Striga asiatica HOM05D006720 ORTHO05D008333 1.0e-20 104.4 113 48.7
Hma1.2p1_0338F.1_g129710 Hydrangea macrophylla HOM05D006720 ORTHO05D008333 8.7e-20 101.3 67 70.1
PGR031G2660 Punica granatum HOM05D006720 ORTHO05D008333 3.3e-19 99.4 94 56.4
AagrBONN_evm.TU.Sc2ySwM_368.1228 Anthoceros agrestis HOM05D006720 ORTHO05D008333 1.5e-16 90.5 74 51.4
Potri.003G185401 Populus trichocarpa HOM05D006720 ORTHO05D008333 9.9e-16 87.8 68 58.8
SMO137G0108 Selaginella moellendorffii HOM05D006720 ORTHO05D008333 2.2e-15 86.7 65 64.6
CBR_g4400 Chara braunii HOM05D006720 ORTHO05D008333 2.8e-10 69.7 171 32.7
AagrBONN_evm.TU.Sc2ySwM_362.1577 Anthoceros agrestis HOM05D006720 ORTHO05D008333 2.6e-08 63.2 47 55.3


User provided reference genes

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