Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv21425 Davidia involucrata HOM05D017379 ORTHO05D008827 1.6e-307 1058.9 650 100.0
Dinv23269 Davidia involucrata HOM05D017379 ORTHO05D008827 1.5e-188 663.7 524 71.4
Actinidia26582 Actinidia chinensis HOM05D017379 ORTHO05D008827 4.7e-94 349.7 490 46.9
Actinidia08936 Actinidia chinensis HOM05D017379 ORTHO05D008827 6.3e-91 339.3 494 48.2
Actinidia36865 Actinidia chinensis HOM05D017379 ORTHO05D008827 1.7e-83 314.7 436 47.0
Rhsim08G0203200 Rhododendron simsii HOM05D004918 ORTHO05D005706 1.8e-74 284.6 489 42.7
Rhsim12G0185500 Rhododendron simsii HOM05D017379 ORTHO05D008827 4.3e-63 246.9 507 40.2
GSVIVG01016106001 Vitis vinifera HOM05D008438 ORTHO05D008827 1.9e-58 231.5 468 37.4
Haze_16688 Corylus avellana HOM05D008438 ORTHO05D008827 2.5e-47 194.5 465 32.7
TAR625G0030 Trochodendron aralioides HOM05D008438 ORTHO05D008827 1.1e-45 189.1 414 35.3
Actinidia18261 Actinidia chinensis HOM05D017379 ORTHO05D008827 1.9e-39 168.3 341 39.9
Prupe.3G103500 Prunus persica HOM05D015689 ORTHO05D008827 6.0e-33 146.7 479 29.0
Lsat_1_v5_gn_1_30821 Lactuca sativa HOM05D008438 ORTHO05D008827 2.4e-29 134.8 540 29.3
Nitab4.5_0002700g0070 Nicotiana tabacum HOM05D008438 ORTHO05D008827 5.3e-29 133.7 555 28.1
Nitab4.5_0004738g0100 Nicotiana tabacum HOM05D008438 ORTHO05D008827 1.3e-27 129.0 490 28.0
Oeu023269.1 Olea europaea HOM05D008438 ORTHO05D008827 5.5e-26 123.6 452 28.8
Peaxi162Scf00314g01044 Petunia axillaris HOM05D008438 ORTHO05D008827 1.6e-25 122.1 557 26.2
Cc04_g05290 Coffea canephora HOM05D008438 ORTHO05D008827 3.5e-25 120.9 495 28.1
RcHm_v2.0_Chr2g0132351 Rosa chinensis HOM05D015689 ORTHO05D008827 4.5e-20 104.0 489 28.6
MD17G1226300 Malus domestica HOM05D015689 ORTHO05D008827 3.8e-19 100.9 502 27.5
Nn8g40076 Nelumbo nucifera HOM05D039496 ORTHO05D036835 8.7e-16 89.7 362 27.9
PGSC0003DMG400014154 Solanum tuberosum HOM05D008438 ORTHO05D008827 4.3e-15 87.4 533 25.1
Sopen03g036570 Solanum pennellii HOM05D008438 ORTHO05D008827 8.2e-14 83.2 448 26.3
Solyc03g117660.4 Solanum lycopersicum HOM05D008438 ORTHO05D008827 1.4e-13 82.4 448 26.1
TWI18G0426 Tripterygium wilfordii HOM05D008438 ORTHO05D008827 1.1e-10 72.8 495 25.1
Thecc.06G046500 Theobroma cacao HOM05D032892 ORTHO05D008827 7.2e-10 70.1 194 32.5
MSTRG.22807 Avicennia marina HOM05D008438 ORTHO05D008827 9.3e-10 69.7 349 27.8
Duzib235G0641 Durio zibethinus HOM05D032892 ORTHO05D008827 2.1e-09 68.6 426 26.1
Manes.04G100800 Manihot esculenta HOM05D008438 ORTHO05D008827 1.3e-08 65.9 426 22.5
ECA247G0974 Erigeron canadensis HOM05D008438 ORTHO05D008827 2.3e-08 65.1 557 22.3
Nn8g40084 Nelumbo nucifera HOM05D039496 ORTHO05D036835 2.5e-07 61.6 166 31.9
CAN.G1008.6 Capsicum annuum HOM05D008438 ORTHO05D008827 7.4e-07 60.1 459 24.4


User provided reference genes

Program Settings