Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 3.0e-171 605.1 316 100.0
Dinv05324 Davidia involucrata HOM05D005155 ORTHO05D006266 3.5e-127 458.8 296 82.4
CSS0035525 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 1.8e-123 446.4 318 77.4
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 1.1e-120 437.2 318 75.2
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 9.2e-120 434.1 317 74.4
Actinidia20617 Actinidia chinensis HOM05D005155 ORTHO05D006266 2.6e-114 416.0 322 71.1
CSS0023894 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 5.4e-112 408.3 318 73.3
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 5.4e-112 408.3 324 68.8
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 1.7e-105 386.7 282 74.1
Manes.13G059900 Manihot esculenta HOM05D005155 ORTHO05D006266 2.1e-100 369.8 314 67.8
GSVIVG01030126001 Vitis vinifera HOM05D005155 ORTHO05D006266 1.4e-99 367.1 274 71.5
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 1.5e-98 363.6 317 65.9
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 1.3e-97 360.5 325 63.7
TAR629G2368 Trochodendron aralioides HOM05D005155 ORTHO05D006266 2.9e-97 359.4 331 62.2
Ciclev10015959m.g Citrus clementina HOM05D005155 ORTHO05D006266 1.1e-96 357.5 322 64.9
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 1.4e-96 357.1 315 65.4
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 9.2e-96 354.4 330 64.2
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 2.1e-95 353.2 337 62.3
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 1.0e-94 350.9 315 65.4
ClCG02G003040 Citrullus lanatus HOM05D005155 ORTHO05D006266 1.9e-93 346.7 322 62.7
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 3.3e-93 345.9 322 63.4
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 4.3e-93 345.5 336 61.9
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 9.6e-93 344.4 325 63.1
DCAR_021083 Daucus carota HOM05D005155 ORTHO05D006266 2.8e-92 342.8 327 61.5
Atru.chr6.3431 Acer truncatum HOM05D005155 ORTHO05D006266 6.2e-92 341.7 305 64.6
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 6.2e-92 341.7 320 60.6
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 8.1e-92 341.3 325 60.6
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 8.9e-91 337.8 320 62.5
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.2e-90 337.4 305 62.6
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 3.4e-90 335.9 315 60.0
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 4.9e-89 332.0 321 60.4
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 1.1e-88 330.9 305 62.0
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 2.1e-87 326.6 338 58.9
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 3.5e-87 325.9 339 58.1
Gorai.001G190100 Gossypium raimondii HOM05D005155 ORTHO05D006266 4.6e-87 325.5 305 62.0
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 1.7e-86 323.6 340 57.4
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 1.7e-86 323.6 346 58.4
Gohir.D07G170200 Gossypium hirsutum HOM05D005155 ORTHO05D006266 3.0e-86 322.8 305 61.6
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 3.0e-86 322.8 353 57.8
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 2.5e-85 319.7 325 58.8
TPR.G3861 Trifolium pratense HOM05D005155 ORTHO05D006266 3.3e-85 319.3 347 55.6
MD09G1131700 Malus domestica HOM05D005155 ORTHO05D006266 1.3e-84 317.4 330 57.3
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 1.6e-84 317.0 309 59.5
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 3.6e-84 315.8 316 56.3
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 6.2e-84 315.1 344 56.4
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.1e-83 314.3 303 60.7
Cc02_g33980 Coffea canephora HOM05D005155 ORTHO05D006266 1.8e-83 313.5 279 63.4
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 1.8e-83 313.5 306 60.5
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 2.6e-82 309.7 336 55.7
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 4.4e-82 308.9 328 57.6
Duzib138G0133 Durio zibethinus HOM05D005155 ORTHO05D006266 7.6e-82 308.1 309 58.3
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 1.3e-81 307.4 302 61.6
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 4.9e-81 305.4 335 54.3
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 4.9e-81 305.4 339 54.3
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 1.4e-80 303.9 331 57.4
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 1.9e-80 303.5 349 55.0
Haze_12586 Corylus avellana HOM05D005155 ORTHO05D006266 2.4e-80 303.1 220 74.1
Psat7g043480 Pisum sativum HOM05D005155 ORTHO05D006266 3.2e-80 302.8 326 58.0
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 6.0e-79 298.5 336 56.8
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 3.9e-78 295.8 285 61.1
FAN09G4460 Fragaria x ananassa HOM05D005155 ORTHO05D006266 3.9e-78 295.8 322 55.9
Peaxi162Scf00359g00214 Petunia axillaris HOM05D005155 ORTHO05D006266 5.1e-78 295.4 323 57.3
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 1.9e-77 293.5 314 56.1
Lsat_1_v5_gn_0_13881 Lactuca sativa HOM05D005155 ORTHO05D006266 2.5e-77 293.1 325 56.6
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 4.3e-77 292.4 324 55.2
TPR.G35685 Trifolium pratense HOM05D005155 ORTHO05D006266 4.3e-77 292.4 348 52.0
FAN02G4414 Fragaria x ananassa HOM05D005155 ORTHO05D006266 5.6e-77 292.0 322 55.6
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 3.6e-76 289.3 317 54.9
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 6.2e-76 288.5 314 54.8
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 8.1e-76 288.1 322 55.0
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 8.1e-76 288.1 321 55.5
FvH4_6g40390 Fragaria vesca HOM05D005155 ORTHO05D006266 1.1e-75 287.7 322 55.0
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 1.8e-75 287.0 330 54.5
Migut.M00065 Erythranthe guttata HOM05D005155 ORTHO05D006266 3.1e-75 286.2 354 51.7
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 9.0e-75 284.6 321 54.2
Nn3g19477 Nelumbo nucifera HOM05D005155 ORTHO05D006266 1.3e-73 280.8 316 55.4
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 2.2e-73 280.0 321 54.8
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 4.9e-73 278.9 332 52.1
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 6.4e-73 278.5 306 55.2
A09p04360 Brassica napus HOM05D005155 ORTHO05D006266 1.4e-72 277.3 318 51.9
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 1.9e-72 276.9 332 51.8
SGA_v2.0_scaffold181G39700 Striga asiatica HOM05D005155 ORTHO05D006266 1.9e-72 276.9 390 47.7
SalBow7G0407 Salvia bowleyana HOM05D005155 ORTHO05D006266 3.2e-72 276.2 320 52.8
HPP92_009941 Vanilla planifolia HOM05D005155 ORTHO05D006266 4.2e-72 275.8 305 55.1
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 1.2e-71 274.2 285 57.5
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 2.1e-71 273.5 330 51.2
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 2.7e-71 273.1 325 51.4
C09p04670 Brassica napus HOM05D005155 ORTHO05D006266 6.0e-71 271.9 317 51.1
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 1.0e-70 271.2 268 56.7
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 1.8e-70 270.4 315 52.1
Nn1g02050 Nelumbo nucifera HOM05D005155 ORTHO05D006266 2.3e-70 270.0 315 53.7
FAN14G3535 Fragaria x ananassa HOM05D005155 ORTHO05D006266 4.3e-69 265.8 345 50.1
EL10Ac5g10791 Beta vulgaris HOM05D005155 ORTHO05D006266 1.3e-68 264.2 290 57.9
BcaB04g19566 Brassica carinata HOM05D005155 ORTHO05D006266 6.2e-68 261.9 321 49.2
BolC9t53395H Brassica oleracea HOM05D005155 ORTHO05D006266 8.1e-68 261.5 344 47.1
BraA09t36073Z Brassica rapa HOM05D005155 ORTHO05D006266 2.4e-67 260.0 355 47.6
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 4.0e-67 259.2 278 57.6
QL04p067008 Quercus lobata HOM05D005155 ORTHO05D006266 5.3e-67 258.8 494 39.9
BcaC04g23785 Brassica carinata HOM05D005155 ORTHO05D006266 1.3e-65 254.2 319 48.9
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 2.9e-65 253.1 309 51.1
ECA248G0062 Erigeron canadensis HOM05D005155 ORTHO05D006266 3.8e-65 252.7 361 47.4
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 4.9e-65 252.3 320 49.4
Gohir.A11G147700 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.9e-64 250.4 305 53.4
CARHR218550 Cardamine hirsuta HOM05D005155 ORTHO05D006266 1.2e-63 247.7 272 53.3
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 1.2e-63 247.7 231 61.0
MSTRG.6620 Avicennia marina HOM05D005155 ORTHO05D006266 1.6e-63 247.3 218 64.7
COL.COLO4_19654 Corchorus olitorius HOM05D005155 ORTHO05D006266 2.3e-62 243.4 171 74.3
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 1.1e-61 241.1 313 48.9
Psat5g216800 Pisum sativum HOM05D005155 ORTHO05D006266 5.7e-61 238.8 288 53.5
BcaC06g30816 Brassica carinata HOM05D005155 ORTHO05D006266 7.4e-61 238.4 316 47.8
CDE09G0959 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 1.3e-60 237.7 291 51.5
MD17G1119200 Malus domestica HOM05D005155 ORTHO05D006266 9.0e-59 231.5 253 56.9
Lj1A800T38 Lonicera japonica HOM05D005155 ORTHO05D006266 3.4e-58 229.6 320 49.1
BraA06t26845Z Brassica rapa HOM05D005155 ORTHO05D006266 1.1e-56 224.6 349 43.3
CiPaw.03G283900 Carya illinoinensis HOM05D005155 ORTHO05D006266 1.4e-56 224.2 337 49.9
ATR0225G032 Amborella trichopoda HOM05D005155 ORTHO05D006266 3.9e-54 216.1 323 44.9
Os11g0266000 Oryza sativa ssp. japonica HOM05D005155 ORTHO05D006266 8.5e-49 198.4 276 44.2
BolC7t44418H Brassica oleracea HOM05D005155 ORTHO05D006266 2.7e-47 193.4 257 50.6
SEGI_31719 Sequoiadendron giganteum HOM05D005155 ORTHO05D006266 3.0e-46 189.9 210 53.8
Zm00001eb298370 Zea mays HOM05D005155 ORTHO05D006266 5.1e-46 189.1 204 53.4
Nn1g02049 Nelumbo nucifera HOM05D005155 ORTHO05D006266 1.1e-45 188.0 182 62.1
Cc00_g18660 Coffea canephora HOM05D005155 ORTHO05D006266 1.1e-43 181.4 112 83.0
Cc00_g14350 Coffea canephora HOM05D005155 ORTHO05D006266 9.1e-43 178.3 114 80.7
PSO782G5585 Papaver somniferum HOM05D005155 ORTHO05D006266 4.2e-40 169.5 278 42.8
Cc07_g20190 Coffea canephora HOM05D005155 ORTHO05D006266 1.5e-37 161.0 111 76.6
AUR62008242 Chenopodium quinoa HOM05D005155 ORTHO05D006266 2.6e-34 150.2 187 51.3
PSO782G0752 Papaver somniferum HOM05D005155 ORTHO05D006266 4.5e-34 149.4 223 45.7
QL01p014609 Quercus lobata HOM05D005155 ORTHO05D006266 8.5e-33 145.2 114 67.5
Hma1.2p1_1388F.1_g279940 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 9.1e-27 125.2 68 89.7
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis HOM05D005155 ORTHO05D006266 5.0e-25 119.4 203 41.4
Cc07_g20180 Coffea canephora HOM05D005155 ORTHO05D006266 7.2e-24 115.5 105 58.1
MD17G1119400 Malus domestica HOM05D005155 ORTHO05D006266 1.0e-22 111.7 80 71.2
QL03p064628 Quercus lobata HOM05D005155 ORTHO05D006266 1.2e-21 108.2 318 34.0
Cc00_g29960 Coffea canephora HOM05D005155 ORTHO05D006266 1.0e-17 95.1 84 60.7
Mapoly0148s0006 Marchantia polymorpha HOM05D005155 ORTHO05D006266 1.0e-17 95.1 174 38.5
Pp3c22_320 Physcomitrium patens HOM05D005155 ORTHO05D006266 5.5e-16 89.4 193 35.2
Pp3c22_322 Physcomitrium patens HOM05D005155 ORTHO05D006266 5.5e-16 89.4 193 35.2
CBR_g23113 Chara braunii HOM05D005155 ORTHO05D006266 2.1e-15 87.4 189 38.1
Lj1A800T39 Lonicera japonica HOM05D005155 ORTHO05D006266 5.4e-11 72.8 52 71.2
A02p30930 Brassica napus HOM05D005155 ORTHO05D006266 5.9e-10 69.3 66 57.6
QL03p064635 Quercus lobata HOM05D005155 ORTHO05D006266 7.7e-10 68.9 60 63.3
PRCOL_00000835 Prasinoderma coloniale HOM05D005155 ORTHO05D006266 5.0e-09 66.2 163 34.4
unitig_749.g13565 Utricularia gibba HOM05D005155 ORTHO05D006266 2.5e-08 63.9 106 42.5


User provided reference genes

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