Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv21311 Davidia involucrata HOM05D003575 ORTHO05D003587 1.1e-147 526.6 266 100.0
Hma1.2p1_0599F.1_g187070 Hydrangea macrophylla HOM05D003575 ORTHO05D003587 4.4e-91 338.6 259 69.9
Actinidia07857 Actinidia chinensis HOM05D003575 ORTHO05D003587 1.8e-76 290.0 261 61.7
CSS0012601 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 1.6e-69 266.9 195 70.8
CSS0035464 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 1.6e-69 266.9 195 70.8
Rhsim06G0177900 Rhododendron simsii HOM05D003575 ORTHO05D003587 4.9e-66 255.4 267 55.4
TAR626G1391 Trochodendron aralioides HOM05D003575 ORTHO05D003587 8.4e-66 254.6 266 52.6
vmacro12070 Vaccinium macrocarpon HOM05D003575 ORTHO05D003587 1.9e-65 253.4 280 51.8
DCAR_019672 Daucus carota HOM05D003575 ORTHO05D003587 2.0e-51 206.8 182 56.6
Oeu029955.1 Olea europaea HOM05D003575 ORTHO05D003587 3.4e-51 206.1 191 54.5
ECA236G0897 Erigeron canadensis HOM05D003575 ORTHO05D003587 1.6e-45 187.2 207 46.9
Potri.002G216900 Populus trichocarpa HOM05D003575 ORTHO05D003587 1.8e-44 183.7 162 56.2
Nn1g03152 Nelumbo nucifera HOM05D003575 ORTHO05D003587 4.0e-44 182.6 254 45.7
TWI18G0759 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 6.9e-44 181.8 186 50.5
TWI36G1168 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 5.8e-43 178.7 267 41.6
HanXRQChr04g0126411 Helianthus annuus HOM05D003575 ORTHO05D003587 1.3e-42 177.6 188 46.3
Cc00_g01040 Coffea canephora HOM05D003575 ORTHO05D003587 1.1e-41 174.5 194 50.5
Lsat_1_v5_gn_7_97960 Lactuca sativa HOM05D003575 ORTHO05D003587 1.9e-41 173.7 191 49.7
MSTRG.426 Avicennia marina HOM05D003575 ORTHO05D003587 9.3e-41 171.4 261 39.5
Solyc12g006060.2 Solanum lycopersicum HOM05D003575 ORTHO05D003587 6.0e-40 168.7 252 41.3
Sopen12g002030 Solanum pennellii HOM05D003575 ORTHO05D003587 7.9e-40 168.3 254 40.6
Ciclev10015675m.g Citrus clementina HOM05D003575 ORTHO05D003587 1.0e-39 167.9 195 50.3
Sed0014379 Sechium edule HOM05D003575 ORTHO05D003587 1.8e-39 167.2 232 42.2
Duzib133G0340 Durio zibethinus HOM05D003575 ORTHO05D003587 2.3e-39 166.8 210 44.3
Migut.L00790 Erythranthe guttata HOM05D003575 ORTHO05D003587 2.3e-39 166.8 181 48.6
SGA_v2.0_scaffold407G51066 Striga asiatica HOM05D003575 ORTHO05D003587 3.9e-39 166.0 280 38.9
Thecc.01G197600 Theobroma cacao HOM05D003575 ORTHO05D003587 8.7e-39 164.9 269 40.9
PGSC0003DMG401004292 Solanum tuberosum HOM05D003575 ORTHO05D003587 3.3e-38 162.9 256 39.1
ClCG02G002950 Citrullus lanatus HOM05D003575 ORTHO05D003587 5.7e-38 162.2 261 39.5
CiPaw.04G197600 Carya illinoinensis HOM05D003575 ORTHO05D003587 9.7e-38 161.4 182 47.8
RcHm_v2.0_Chr7g0213061 Rosa chinensis HOM05D003575 ORTHO05D003587 2.2e-37 160.2 181 47.5
Aqoxy5G03849 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 4.8e-37 159.1 177 43.5
MELO3C030470.2 Cucumis melo HOM05D003575 ORTHO05D003587 4.8e-37 159.1 262 38.2
HanXRQChr04g0126401 Helianthus annuus HOM05D003575 ORTHO05D003587 8.2e-37 158.3 183 45.4
Gohir.D07G092200 Gossypium hirsutum HOM05D003575 ORTHO05D003587 1.4e-36 157.5 201 44.8
CsaV3_3G046180 Cucumis sativus L. HOM05D003575 ORTHO05D003587 4.1e-36 156.0 261 37.5
Aqoxy4G01549 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 5.3e-36 155.6 188 43.6
FvH4_5g23730 Fragaria vesca HOM05D003575 ORTHO05D003587 1.5e-35 154.1 181 46.4
FAN18G1810 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.5e-35 154.1 181 46.4
FAN18G2204 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.5e-35 154.1 181 46.4
CDE04G2197 Ceratophyllum demersum HOM05D003575 ORTHO05D003587 2.0e-35 153.7 186 41.9
Gorai.001G098800 Gossypium raimondii HOM05D003575 ORTHO05D003587 2.0e-35 153.7 260 40.8
ECA236G1196 Erigeron canadensis HOM05D003366 ORTHO05D004045 4.5e-35 152.5 181 44.2
Gorai.007G165400 Gossypium raimondii HOM05D003575 ORTHO05D003587 5.9e-35 152.1 238 42.4
Peaxi162Scf00047g02035 Petunia axillaris HOM05D003575 ORTHO05D003587 5.9e-35 152.1 260 37.7
CANSAT64G0731 Cannabis sativa HOM05D003575 ORTHO05D003587 7.6e-35 151.8 181 45.3
MD17G1118100 Malus domestica HOM05D003575 ORTHO05D003587 1.3e-34 151.0 174 47.7
FAN21G0497 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.7e-34 150.6 182 46.2
CAN.G437.6 Capsicum annuum HOM05D003575 ORTHO05D003587 2.2e-34 150.2 182 45.6
FAN11G2840 Fragaria x ananassa HOM05D003575 ORTHO05D003587 3.8e-34 149.4 180 44.4
FAN15G3143 Fragaria x ananassa HOM05D003575 ORTHO05D003587 3.8e-34 149.4 169 46.7
Gohir.A11G148300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 3.8e-34 149.4 235 38.7
AUR62014996 Chenopodium quinoa HOM05D003575 ORTHO05D003587 6.5e-34 148.7 288 36.8
FvH4_3g20410 Fragaria vesca HOM05D003575 ORTHO05D003587 6.5e-34 148.7 182 46.2
FAN11G3075 Fragaria x ananassa HOM05D003575 ORTHO05D003587 6.5e-34 148.7 182 46.2
RcHm_v2.0_Chr2g0155771 Rosa chinensis HOM05D003575 ORTHO05D003587 6.5e-34 148.7 155 49.7
FvH4_2g12920 Fragaria vesca HOM05D003575 ORTHO05D003587 8.5e-34 148.3 169 46.2
FAN24G1566 Fragaria x ananassa HOM05D003575 ORTHO05D003587 8.5e-34 148.3 169 46.2
RcHm_v2.0_Chr5g0034301 Rosa chinensis HOM05D003575 ORTHO05D003587 8.5e-34 148.3 172 45.9
Sed0014111 Sechium edule HOM05D003575 ORTHO05D003587 8.5e-34 148.3 237 38.4
AUR62035876 Chenopodium quinoa HOM05D003575 ORTHO05D003587 1.4e-33 147.5 282 37.6
FAN20G0397 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.9e-33 147.1 169 45.6
Peaxi162Scf00802g00028 Petunia axillaris HOM05D003575 ORTHO05D003587 1.9e-33 147.1 165 49.7
AUR62029125 Chenopodium quinoa HOM05D003575 ORTHO05D003587 2.5e-33 146.7 282 37.9
QL04p067739 Quercus lobata HOM05D003575 ORTHO05D003587 2.5e-33 146.7 182 44.0
Sabra02G0168700 Salix brachista HOM05D003575 ORTHO05D003587 2.5e-33 146.7 184 44.6
Haze_12614 Corylus avellana HOM05D003366 ORTHO05D004045 3.2e-33 146.4 196 45.9
FAN21G1295 Fragaria x ananassa HOM05D003575 ORTHO05D003587 3.2e-33 146.4 180 43.3
Lsat_1_v5_gn_7_97980 Lactuca sativa HOM05D000074 ORTHO05D001293 4.2e-33 146.0 118 57.6
Phvul.011G189400 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 4.2e-33 146.0 177 43.5
HanXRQChr16g0520571 Helianthus annuus HOM05D003575 ORTHO05D003587 9.3e-33 144.8 160 46.2
arahy.Tifrunner.gnm1.ann1.04VE6P Arachis hypogaea HOM05D003575 ORTHO05D003587 1.2e-32 144.4 172 45.9
Medtr3g082740 Medicago truncatula HOM05D003575 ORTHO05D003587 1.6e-32 144.1 170 44.1
Glyma.13G186300 Glycine max HOM05D003575 ORTHO05D003587 2.7e-32 143.3 183 41.0
Phvul.007G122046 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 3.6e-32 142.9 191 39.8
FAN16G3603 Fragaria x ananassa HOM05D003575 ORTHO05D003587 4.6e-32 142.5 180 42.8
MD09G1128800 Malus domestica HOM05D003575 ORTHO05D003587 6.1e-32 142.1 154 50.0
Aqoxy5G03850 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 7.9e-32 141.7 256 34.8
Haze_12603 Corylus avellana HOM05D003366 ORTHO05D004045 7.9e-32 141.7 167 49.1
Medtr3g082720 Medicago truncatula HOM05D003575 ORTHO05D003587 7.9e-32 141.7 154 44.8
arahy.Tifrunner.gnm1.ann1.F2CSMS Arachis hypogaea HOM05D003575 ORTHO05D003587 1.0e-31 141.4 172 45.3
arahy.Tifrunner.gnm1.ann1.RMR7W1 Arachis hypogaea HOM05D003575 ORTHO05D003587 1.0e-31 141.4 172 45.3
CANSAT21G1971 Cannabis sativa HOM05D003575 ORTHO05D003587 2.3e-31 140.2 165 42.4
Prupe.3G196500 Prunus persica HOM05D003575 ORTHO05D003587 2.3e-31 140.2 173 45.1
RcHm_v2.0_Chr2g0155791 Rosa chinensis HOM05D003575 ORTHO05D003587 3.0e-31 139.8 176 42.6
Solyc07g045320.3 Solanum lycopersicum HOM05D003575 ORTHO05D003587 1.5e-30 137.5 261 34.1
TPR.G40538 Trifolium pratense HOM05D003575 ORTHO05D003587 1.9e-30 137.1 153 43.8
VMungo0647G0230 Vigna mungo HOM05D003575 ORTHO05D003587 2.5e-30 136.7 191 41.4
Lj6g0014157 Lotus japonicus HOM05D003575 ORTHO05D003587 4.3e-30 136.0 184 39.1
Sopen07g023850 Solanum pennellii HOM05D003575 ORTHO05D003587 7.4e-30 135.2 261 33.3
Dinv26594 Davidia involucrata HOM05D000074 ORTHO05D001293 1.3e-29 134.4 76 84.2
Ca_16343_v3 Cicer arietinum L. HOM05D003575 ORTHO05D003587 2.2e-29 133.7 204 37.7
MBI15_g48140_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 2.8e-29 133.3 133 51.9
FvH4_6g40530 Fragaria vesca HOM05D003575 ORTHO05D003587 3.7e-29 132.9 179 42.5
Hund01540 Selenicereus undatus HOM05D003575 ORTHO05D003587 3.7e-29 132.9 199 39.2
TPR.G22472 Trifolium pratense HOM05D003575 ORTHO05D003587 6.3e-29 132.1 154 40.9
ATR0751G270 Amborella trichopoda HOM05D003575 ORTHO05D003587 3.1e-28 129.8 183 38.8
Ah.01g002520 Amaranthus hybridus HOM05D004224 ORTHO05D006437 9.1e-28 128.3 189 37.6
Medtr6g042040 Medicago truncatula HOM05D003575 ORTHO05D003587 9.1e-28 128.3 174 40.2
Manes.12G063604 Manihot esculenta HOM05D003575 ORTHO05D003587 1.5e-27 127.5 115 51.3
Psat5g104640 Pisum sativum HOM05D003575 ORTHO05D003587 2.0e-27 127.1 170 42.9
Medtr6g042090 Medicago truncatula HOM05D003575 ORTHO05D003587 1.3e-26 124.4 170 38.8
SHI10168 Sapria himalayana HOM05D003575 ORTHO05D003587 8.5e-26 121.7 159 42.8
PSO541G2609 Papaver somniferum HOM05D003575 ORTHO05D003587 1.1e-25 121.3 179 39.1
PSO675G6399 Papaver somniferum HOM05D003575 ORTHO05D003587 7.2e-25 118.6 179 38.5
COL.COLO4_19638 Corchorus olitorius HOM05D003575 ORTHO05D003587 9.4e-25 118.2 223 35.4
MBI15_g44598_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 1.2e-24 117.9 143 42.7
FAN25G1379 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.6e-24 117.5 133 45.9
Nitab4.5_0000622g0080 Nicotiana tabacum HOM05D003575 ORTHO05D003587 1.6e-24 117.5 319 29.5
EL10Ac9g22664 Beta vulgaris HOM05D003575 ORTHO05D003587 3.6e-24 116.3 146 40.4
Gohir.A07G087300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 3.9e-23 112.8 98 55.1
FAN16G0569 Fragaria x ananassa HOM05D003575 ORTHO05D003587 8.8e-23 111.7 130 45.4
Dinv26593 Davidia involucrata HOM05D003575 ORTHO05D003587 3.3e-22 109.8 115 59.1
MBI15_g06462_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 5.7e-22 109.0 237 33.8
Nitab4.5_0004644g0050 Nicotiana tabacum HOM05D003575 ORTHO05D003587 9.7e-22 108.2 364 26.6
Gohir.D11G155100 Gossypium hirsutum HOM05D003575 ORTHO05D003587 2.2e-21 107.1 235 33.6
FAN14G3058 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.8e-21 106.7 123 44.7
Nitab4.5_0009864g0030 Nicotiana tabacum HOM05D003575 ORTHO05D003587 1.5e-19 100.9 108 48.1
Aqoxy91s001 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 4.5e-19 99.4 116 41.4
Lalb_Chr14g0362581 Lupinus albus HOM05D003575 ORTHO05D003587 1.3e-18 97.8 102 46.1
SalBow1G3222 Salvia bowleyana HOM05D003575 ORTHO05D003587 5.0e-18 95.9 159 34.6
FvH4_6g40520 Fragaria vesca HOM05D003575 ORTHO05D003587 6.5e-18 95.5 93 47.3
FAN14G2021 Fragaria x ananassa HOM05D003575 ORTHO05D003587 4.2e-17 92.8 93 47.3
FvH4_6g40510 Fragaria vesca HOM05D003575 ORTHO05D003587 1.2e-16 91.3 159 35.2
PSO339G5808 Papaver somniferum HOM05D003575 ORTHO05D003587 2.7e-16 90.1 140 35.0
FvH4_3g17720 Fragaria vesca HOM05D003575 ORTHO05D003587 3.6e-16 89.7 100 44.0
FvH4_3g20450 Fragaria vesca HOM05D039614 ORTHO05D045963 2.6e-14 83.6 125 35.2
FAN11G0216 Fragaria x ananassa HOM05D003575 ORTHO05D045963 5.7e-14 82.4 135 33.3
PGSC0003DMG400017406 Solanum tuberosum HOM05D003575 ORTHO05D003587 9.7e-14 81.6 100 45.0
Glyma.13G007400 Glycine max HOM05D003575 ORTHO05D003587 8.2e-13 78.6 102 38.2
CAN.G437.9 Capsicum annuum HOM05D003575 ORTHO05D003587 9.1e-12 75.1 173 31.8
Glyma.15G224002 Glycine max HOM05D003575 ORTHO05D003587 4.5e-11 72.8 72 47.2
CAN.G437.8 Capsicum annuum HOM05D003575 ORTHO05D003587 7.7e-11 72.0 86 43.0
Lalb_Chr14g0362571 Lupinus albus HOM05D003575 ORTHO05D003587 1.0e-10 71.6 86 43.0
ATR0751G016 Amborella trichopoda HOM05D003575 ORTHO05D003587 9.4e-09 65.1 49 57.1


User provided reference genes

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