Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv21298 Davidia involucrata HOM05D005849 ORTHO05D004704 1.8e-94 349.4 194 100.0
Dinv26604 Davidia involucrata HOM05D005849 ORTHO05D004704 3.1e-54 215.7 234 60.7
Lj8P136T22 Lonicera japonica HOM05D005849 ORTHO05D004704 1.8e-33 146.7 227 45.8
Prupe.3G197400 Prunus persica HOM05D005849 ORTHO05D004704 1.3e-31 140.6 236 44.5
QL04p068477 Quercus lobata HOM05D005849 ORTHO05D004704 6.4e-31 138.3 226 44.7
MD09G1126800 Malus domestica HOM05D005849 ORTHO05D004704 2.7e-29 132.9 210 44.3
CiPaw.04G197000 Carya illinoinensis HOM05D005849 ORTHO05D004704 1.0e-28 131.0 237 42.6
FAN05G2424 Fragaria x ananassa HOM05D005849 ORTHO05D004704 1.0e-28 131.0 223 41.7
FvH4_6g40610 Fragaria vesca HOM05D005849 ORTHO05D004704 1.7e-28 130.2 223 41.7
FAN14G3262 Fragaria x ananassa HOM05D005849 ORTHO05D004704 1.7e-28 130.2 223 41.7
Actinidia35203 Actinidia chinensis HOM05D005849 ORTHO05D004704 3.0e-28 129.4 213 47.4
FAN02G2959 Fragaria x ananassa HOM05D005849 ORTHO05D004704 1.9e-27 126.7 223 40.8
FAN09G2506 Fragaria x ananassa HOM05D005849 ORTHO05D004704 1.6e-26 123.6 223 40.4
RcHm_v2.0_Chr2g0155981 Rosa chinensis HOM05D005849 ORTHO05D004704 2.1e-26 123.2 222 40.1
Haze_12628 Corylus avellana HOM05D005849 ORTHO05D004704 2.8e-26 122.9 199 46.2
Manes.13G061900 Manihot esculenta HOM05D005849 ORTHO05D004704 3.6e-26 122.5 238 42.9
Sabra14G0127500 Salix brachista HOM05D005849 ORTHO05D004704 3.6e-26 122.5 236 41.9
Duzib133G0645 Durio zibethinus HOM05D005849 ORTHO05D004704 1.1e-25 120.9 224 40.6
Cfa014225 Carpinus fangiana HOM05D005849 ORTHO05D004704 3.1e-25 119.4 199 45.7
Rhsim06G0176600 Rhododendron simsii HOM05D005849 ORTHO05D004704 4.0e-25 119.0 216 43.5
Duzib138G1177 Durio zibethinus HOM05D005849 ORTHO05D004704 2.0e-24 116.7 226 40.3
TAR629G2911 Trochodendron aralioides HOM05D005849 ORTHO05D004704 3.4e-24 115.9 197 44.2
Potri.014G167700 Populus trichocarpa HOM05D005849 ORTHO05D004704 2.2e-23 113.2 248 40.7
CiPaw.03G281900 Carya illinoinensis HOM05D005849 ORTHO05D004704 3.8e-23 112.5 230 43.5
Nitab4.5_0000006g0660 Nicotiana tabacum HOM05D005849 ORTHO05D004704 6.4e-23 111.7 241 36.9
Nn1g03187 Nelumbo nucifera HOM05D005849 ORTHO05D004704 1.6e-21 107.1 230 36.1
Actinidia07866 Actinidia chinensis HOM05D005849 ORTHO05D004704 2.7e-21 106.3 198 41.4
Gohir.A07G192100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 3.9e-20 102.4 221 38.9
Thecc.01G196200 Theobroma cacao HOM05D005849 ORTHO05D004704 3.9e-20 102.4 234 37.2
COL.COLO4_19617 Corchorus olitorius HOM05D005849 ORTHO05D004704 5.1e-20 102.1 250 39.6
Gorai.001G222200 Gossypium raimondii HOM05D005849 ORTHO05D004704 5.1e-20 102.1 222 38.3
Gohir.D07G198400 Gossypium hirsutum HOM05D005849 ORTHO05D004704 6.6e-20 101.7 222 37.8
Gorai.001G191400 Gossypium raimondii HOM05D005849 ORTHO05D004704 7.3e-19 98.2 208 40.4
Cc03_g07410 Coffea canephora HOM05D005849 ORTHO05D004704 1.2e-18 97.4 291 34.0
Peaxi162Scf00802g00130 Petunia axillaris HOM05D005849 ORTHO05D004704 1.6e-18 97.1 203 37.4
PGR083G2364 Punica granatum HOM05D005849 ORTHO05D004704 4.7e-18 95.5 226 36.7
TWI36G1699 Tripterygium wilfordii HOM05D005849 ORTHO05D004704 8.1e-18 94.7 248 35.1
Manes.12G064702 Manihot esculenta HOM05D005849 ORTHO05D004704 1.4e-17 94.0 225 39.6
AUR62015005 Chenopodium quinoa HOM05D005849 ORTHO05D004704 3.1e-17 92.8 225 37.8
Gohir.A07G169800 Gossypium hirsutum HOM05D005849 ORTHO05D004704 3.1e-17 92.8 208 39.4
Gohir.D07G171100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 3.1e-17 92.8 208 39.4
Actinidia18832 Actinidia chinensis HOM05D005849 ORTHO05D004704 6.9e-17 91.7 102 55.9
Cpa.g.sc136.30 Carica papaya HOM05D005849 ORTHO05D004704 6.9e-17 91.7 248 36.7
TAR629G2787 Trochodendron aralioides HOM05D005849 ORTHO05D004704 6.9e-17 91.7 122 50.8
Aqoxy4G02338 Aquilegia oxysepala HOM05D005849 ORTHO05D004704 8.9e-17 91.3 235 37.4
Medtr5g098480 Medicago truncatula HOM05D005849 ORTHO05D004704 1.7e-15 87.0 190 40.0
Lalb_Chr10g0107651 Lupinus albus HOM05D005849 ORTHO05D004704 2.9e-15 86.3 227 36.6
MD17G1117100 Malus domestica HOM05D005849 ORTHO05D004704 3.8e-15 85.9 171 40.4
MBI16_g22138_MAGBIO Magnolia biondii HOM05D005849 ORTHO05D004704 6.4e-15 85.1 233 35.6
Glyma.13G006500 Glycine max HOM05D005849 ORTHO05D004704 1.4e-14 84.0 220 37.7
EL10Ac9g22679 Beta vulgaris HOM05D005849 ORTHO05D004704 4.2e-14 82.4 250 33.6
TWI18G0644 Tripterygium wilfordii HOM05D005849 ORTHO05D004704 5.4e-14 82.0 251 32.7
Sed0027972 Sechium edule HOM05D005849 ORTHO05D004704 7.1e-14 81.6 192 35.4
Sopen07g023990 Solanum pennellii HOM05D005849 ORTHO05D004704 7.1e-14 81.6 114 46.5
Duzib213G0789 Durio zibethinus HOM05D005849 ORTHO05D004704 1.2e-13 80.9 228 36.4
Sed0012118 Sechium edule HOM05D005849 ORTHO05D004704 1.2e-13 80.9 200 38.5
PSO675G3647 Papaver somniferum HOM05D005849 ORTHO05D004704 2.7e-13 79.7 240 33.8
Phvul.007G121090 Phaseolus vulgaris HOM05D005849 ORTHO05D004704 2.7e-13 79.7 229 37.6
TPR.G35904 Trifolium pratense HOM05D005849 ORTHO05D004704 2.7e-13 79.7 200 37.5
Potri.001G367100 Populus trichocarpa HOM05D005849 ORTHO05D004704 7.8e-13 78.2 235 35.3
Psat5g104280 Pisum sativum HOM05D005849 ORTHO05D004704 1.0e-12 77.8 204 36.8
PSO541G2883 Papaver somniferum HOM05D005849 ORTHO05D004704 1.3e-12 77.4 235 32.8
CsaV3_6G009640 Cucumis sativus L. HOM05D005849 ORTHO05D004704 2.3e-12 76.6 212 34.9
Ah.01g002540 Amaranthus hybridus HOM05D005849 ORTHO05D004704 3.9e-12 75.9 227 32.2
Gohir.A01G091100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 5.1e-12 75.5 212 35.8
Solyc07g045450.1 Solanum lycopersicum HOM05D005849 ORTHO05D004704 5.1e-12 75.5 326 27.3
CiPaw.11G203200 Carya illinoinensis HOM05D005849 ORTHO05D004704 6.6e-12 75.1 242 35.1
LjContig00081g0015024 Lotus japonicus HOM05D005849 ORTHO05D004704 8.7e-12 74.7 224 34.4
MSTRG.12249 Avicennia marina HOM05D005849 ORTHO05D004704 1.5e-11 73.9 238 32.8
Manes.15G060700 Manihot esculenta HOM05D005849 ORTHO05D004704 1.5e-11 73.9 238 30.7
Oeu064351.1 Olea europaea HOM05D005849 ORTHO05D004704 1.5e-11 73.9 141 41.8
Thecc.07G014700 Theobroma cacao HOM05D005849 ORTHO05D004704 1.5e-11 73.9 237 32.5
DCAR_019680 Daucus carota HOM05D005849 ORTHO05D004704 1.9e-11 73.6 205 33.7
Sc20g0004000 Simmondsia chinensis HOM05D005849 ORTHO05D004704 1.9e-11 73.6 223 30.9
Sabra16G0240400 Salix brachista HOM05D005849 ORTHO05D004704 2.5e-11 73.2 233 35.2
MBI19_g14891_MAGBIO Magnolia biondii HOM05D005849 ORTHO05D004704 3.3e-11 72.8 133 39.1
Gorai.002G099600 Gossypium raimondii HOM05D005849 ORTHO05D004704 5.6e-11 72.0 213 35.2
TPR.G11064 Trifolium pratense HOM05D005849 ORTHO05D004704 7.3e-11 71.6 224 31.7
Lsat_1_v5_gn_5_122020 Lactuca sativa HOM05D005849 ORTHO05D004704 9.6e-11 71.2 211 34.6
Nn1g07503 Nelumbo nucifera HOM05D005849 ORTHO05D004704 9.6e-11 71.2 127 40.9
Manes.03G140700 Manihot esculenta HOM05D005849 ORTHO05D004704 1.3e-10 70.9 238 31.1
Ciclev10018021m.g Citrus clementina HOM05D005849 ORTHO05D004704 1.6e-10 70.5 206 35.4
Manes.03G140566 Manihot esculenta HOM05D005849 ORTHO05D004704 1.6e-10 70.5 238 30.7
QL08p004345 Quercus lobata HOM05D005849 ORTHO05D004704 2.8e-10 69.7 231 35.9
QL11p054311 Quercus lobata HOM05D005849 ORTHO05D004704 2.8e-10 69.7 231 35.9
AUR62029117 Chenopodium quinoa HOM05D005849 ORTHO05D004704 8.1e-10 68.2 188 37.8
Nitab4.5_0001701g0180 Nicotiana tabacum HOM05D005849 ORTHO05D004704 8.1e-10 68.2 177 35.6
MELO3C025957.2 Cucumis melo HOM05D005849 ORTHO05D004704 1.4e-09 67.4 90 51.1
Glyma.20G062100 Glycine max HOM05D005849 ORTHO05D004704 1.4e-09 67.4 235 37.0
VMungo0540G1302 Vigna mungo HOM05D005849 ORTHO05D004704 1.4e-09 67.4 90 46.7
arahy.Tifrunner.gnm1.ann1.S46AGL Arachis hypogaea HOM05D005849 ORTHO05D004704 2.4e-09 66.6 193 35.8
Ciclev10009298m.g Citrus clementina HOM05D005849 ORTHO05D004704 2.4e-09 66.6 223 31.8
Phvul.006G056700 Phaseolus vulgaris HOM05D005849 ORTHO05D004704 2.4e-09 66.6 96 45.8
Lj6g0007370 Lotus japonicus HOM05D005849 ORTHO05D004704 4.0e-09 65.9 75 52.0
Lsat_1_v5_gn_9_103781 Lactuca sativa HOM05D005849 ORTHO05D004704 5.3e-09 65.5 175 38.3
VMungo0540G2501 Vigna mungo HOM05D005849 ORTHO05D004704 9.0e-09 64.7 188 34.0
CiPaw.12G137700 Carya illinoinensis HOM05D005849 ORTHO05D004704 1.5e-08 63.9 239 31.8
Medtr3g082780 Medicago truncatula HOM05D005849 ORTHO05D004704 1.5e-08 63.9 157 36.3
Glyma.08G329000 Glycine max HOM05D005849 ORTHO05D004704 2.0e-08 63.5 94 44.7
DCAR_012893 Daucus carota HOM05D005849 ORTHO05D004704 2.6e-08 63.2 145 40.7
Lalb_Chr15g0082031 Lupinus albus HOM05D005849 ORTHO05D004704 3.4e-08 62.8 146 36.3
Cpa.g.sc12.153 Carica papaya HOM05D005849 ORTHO05D004704 1.3e-07 60.8 139 41.7
PGSC0003DMG400017375 Solanum tuberosum HOM05D005849 ORTHO05D004704 2.2e-07 60.1 93 39.8
Gohir.D01G076400 Gossypium hirsutum HOM05D005849 ORTHO05D004704 3.8e-07 59.3 140 37.1
Nitab4.5_0004125g0020 Nicotiana tabacum HOM05D005849 ORTHO05D004704 3.8e-07 59.3 154 37.0
A04p10030 Brassica napus HOM05D009495 ORTHO05D004704 4.9e-07 58.9 193 30.1
BraA04t16665Z Brassica rapa HOM05D009495 ORTHO05D004704 4.9e-07 58.9 193 30.1
AT5G35870 Arabidopsis thaliana HOM05D009495 ORTHO05D004704 6.4e-07 58.5 186 29.0
Cfa020199 Carpinus fangiana HOM05D005849 ORTHO05D004704 8.4e-07 58.2 211 28.4
COL.COLO4_09821 Corchorus olitorius HOM05D005849 ORTHO05D004704 1.4e-06 57.4 193 34.2
Glyma.18G077800 Glycine max HOM05D014115 ORTHO05D004704 1.4e-06 57.4 93 45.2
Ca_06483_v3 Cicer arietinum L. HOM05D005849 ORTHO05D004704 1.9e-06 57.0 130 40.8
Thhalv10002998m.g Eutrema salsugineum HOM05D009495 ORTHO05D004704 2.4e-06 56.6 195 29.7
ECA240G3450 Erigeron canadensis HOM05D005849 ORTHO05D004704 3.2e-06 56.2 127 43.3
AT2G04480 Arabidopsis thaliana HOM05D009495 ORTHO05D004704 4.2e-06 55.8 193 28.5
arahy.Tifrunner.gnm1.ann1.UTL0P7 Arachis hypogaea HOM05D005849 ORTHO05D004704 4.2e-06 55.8 166 33.7
Actinidia09789 Actinidia chinensis HOM05D005849 ORTHO05D004704 5.4e-06 55.5 139 36.7
Thhalv10005712m.g Eutrema salsugineum HOM05D009495 ORTHO05D004704 5.4e-06 55.5 188 29.8
Sp7g06260 Schrenkiella parvula HOM05D009495 ORTHO05D004704 7.1e-06 55.1 188 30.3
AL3G42130 Arabidopsis lyrata HOM05D009495 ORTHO05D004704 9.3e-06 54.7 198 29.8
CARHR216740 Cardamine hirsuta HOM05D009495 ORTHO05D004704 9.3e-06 54.7 186 31.2


User provided reference genes

Program Settings