Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv21268 Davidia involucrata HOM05D006043 ORTHO05D007309 9.8e-69 263.5 145 100.0
Atru.chr8.1654 Acer truncatum HOM05D006043 ORTHO05D007309 5.2e-46 188.0 145 69.0
Prupe.7G119300 Prunus persica HOM05D006043 ORTHO05D007309 4.4e-45 184.9 145 66.9
QL07p040748 Quercus lobata HOM05D006043 ORTHO05D007309 9.9e-45 183.7 141 68.8
Haze_19524 Corylus avellana HOM05D006043 ORTHO05D007309 1.3e-44 183.3 146 67.1
Manes.08G019800 Manihot esculenta HOM05D006043 ORTHO05D007309 2.2e-44 182.6 144 66.7
Rhsim06G0171100 Rhododendron simsii HOM05D006043 ORTHO05D007309 4.9e-44 181.4 145 64.1
CiPaw.10G004600 Carya illinoinensis HOM05D006043 ORTHO05D007309 1.4e-43 179.9 147 66.7
Cpa.g.sc5.89 Carica papaya HOM05D006043 ORTHO05D007309 3.2e-43 178.7 143 68.5
Gorai.006G158600 Gossypium raimondii HOM05D006043 ORTHO05D007309 3.5e-42 175.3 142 65.5
vmacro12136 Vaccinium macrocarpon HOM05D006043 ORTHO05D007309 6.0e-42 174.5 145 62.8
CANSAT80G1206 Cannabis sativa HOM05D006043 ORTHO05D007309 1.3e-41 173.3 145 62.8
Gohir.D09G138000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 1.7e-41 172.9 142 64.8
Ca_08959_v3 Cicer arietinum L. HOM05D006043 ORTHO05D007309 5.1e-41 171.4 143 61.5
MD12G1016000 Malus domestica HOM05D006043 ORTHO05D007309 5.1e-41 171.4 145 62.1
Cfa016525 Carpinus fangiana HOM05D006043 ORTHO05D007309 8.7e-41 170.6 147 66.0
FAN02G0054 Fragaria x ananassa HOM05D006043 ORTHO05D007309 8.7e-41 170.6 146 62.3
MD14G1014200 Malus domestica HOM05D006043 ORTHO05D007309 8.7e-41 170.6 145 62.1
Potri.013G014300 Populus trichocarpa HOM05D006043 ORTHO05D007309 1.1e-40 170.2 147 63.3
Ciclev10013017m.g Citrus clementina HOM05D006043 ORTHO05D007309 1.5e-40 169.9 146 66.4
FvH4_6g17700 Fragaria vesca HOM05D006043 ORTHO05D007309 1.5e-40 169.9 146 61.6
Duzib106G1072 Durio zibethinus HOM05D006043 ORTHO05D007309 2.5e-40 169.1 149 59.7
CSS0040940 Camellia sinensis var. sinensis HOM05D006043 ORTHO05D007309 3.3e-40 168.7 151 64.9
RcHm_v2.0_Chr3g0471911 Rosa chinensis HOM05D006043 ORTHO05D007309 5.6e-40 167.9 145 61.4
Eucgr.K02399 Eucalyptus grandis HOM05D006043 ORTHO05D007309 7.3e-40 167.5 146 63.7
VMungo1383G3657 Vigna mungo HOM05D006043 ORTHO05D007309 1.3e-39 166.8 143 60.8
ClCG10G019450 Citrullus lanatus HOM05D006043 ORTHO05D007309 1.6e-39 166.4 144 64.6
MELO3C009427.2 Cucumis melo HOM05D006043 ORTHO05D007309 1.6e-39 166.4 144 63.2
CsaV3_3G036730 Cucumis sativus L. HOM05D006043 ORTHO05D007309 2.1e-39 166.0 144 63.2
Eucgr.K02384 Eucalyptus grandis HOM05D006043 ORTHO05D007309 2.1e-39 166.0 146 63.0
Lalb_Chr20g0112261 Lupinus albus HOM05D006043 ORTHO05D007309 2.8e-39 165.6 143 62.2
Cc00_g32800 Coffea canephora HOM05D006043 ORTHO05D007309 3.6e-39 165.2 141 66.0
Eucgr.K02410 Eucalyptus grandis HOM05D006043 ORTHO05D007309 3.6e-39 165.2 146 62.3
Eucgr.K02389 Eucalyptus grandis HOM05D006043 ORTHO05D007309 8.1e-39 164.1 146 62.3
Gohir.A09G136312 Gossypium hirsutum HOM05D006043 ORTHO05D007309 8.1e-39 164.1 151 59.6
Phvul.001G185700 Phaseolus vulgaris HOM05D006043 ORTHO05D007309 2.4e-38 162.5 143 61.5
Glyma.03G190100 Glycine max HOM05D006043 ORTHO05D007309 9.0e-38 160.6 143 59.4
Gohir.D04G105000 Gossypium hirsutum HOM05D006043 ORTHO05D007309 9.0e-38 160.6 141 60.3
Gorai.009G408700 Gossypium raimondii HOM05D006043 ORTHO05D007309 9.0e-38 160.6 141 60.3
Gohir.A04G066428 Gossypium hirsutum HOM05D006043 ORTHO05D007309 1.2e-37 160.2 141 60.3
MBI01_g32535_MAGBIO Magnolia biondii HOM05D006043 ORTHO05D007309 2.6e-37 159.1 137 65.0
COL.COLO4_29832 Corchorus olitorius HOM05D006043 ORTHO05D007309 4.5e-37 158.3 141 59.6
Glyma.19G190400 Glycine max HOM05D006043 ORTHO05D007309 9.9e-37 157.1 143 57.3
Peaxi162Scf00412g00073 Petunia axillaris HOM05D006043 ORTHO05D007309 2.2e-36 156.0 141 61.7
Cc06_g05110 Coffea canephora HOM05D006043 ORTHO05D007309 4.9e-36 154.8 146 60.3
Medtr7g103520 Medicago truncatula HOM05D006043 ORTHO05D007309 1.4e-35 153.3 145 55.2
Duzib093G0521 Durio zibethinus HOM05D006043 ORTHO05D007309 2.4e-35 152.5 141 59.6
Psat3g036320 Pisum sativum HOM05D006043 ORTHO05D007309 4.2e-35 151.8 107 67.3
Lj1g0027910 Lotus japonicus HOM05D006043 ORTHO05D007309 5.4e-35 151.4 143 56.6
TPR.G7024 Trifolium pratense HOM05D006043 ORTHO05D007309 5.4e-35 151.4 143 55.2
Nitab4.5_0010125g0030 Nicotiana tabacum HOM05D006043 ORTHO05D007309 1.2e-34 150.2 145 55.2
Eucgr.A01560 Eucalyptus grandis HOM05D006043 ORTHO05D007309 2.7e-34 149.1 107 66.4
HanXRQChr09g0259401 Helianthus annuus HOM05D006043 ORTHO05D007309 2.7e-34 149.1 140 59.3
Cc00_g05260 Coffea canephora HOM05D006043 ORTHO05D007309 3.5e-34 148.7 141 61.0
Oeu030483.1 Olea europaea HOM05D006043 ORTHO05D007309 6.0e-34 147.9 141 66.7
Sc07g0005350 Simmondsia chinensis HOM05D006043 ORTHO05D007309 3.0e-33 145.6 145 58.6
TWI53G1797 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 3.0e-33 145.6 108 67.6
Oeu040545.1 Olea europaea HOM05D006043 ORTHO05D007309 5.1e-33 144.8 144 59.0
Nitab4.5_0010125g0040 Nicotiana tabacum HOM05D006043 ORTHO05D007309 2.5e-32 142.5 116 62.1
C05p58050 Brassica napus HOM05D002004 ORTHO05D002089 5.6e-32 141.4 142 56.3
BolC5t34462H Brassica oleracea HOM05D006043 ORTHO05D007309 5.6e-32 141.4 142 56.3
Aa31LG3G2550 Aethionema arabicum HOM05D006043 ORTHO05D007309 7.4e-32 141.0 141 53.2
BraA05t22694Z Brassica rapa HOM05D006043 ORTHO05D007309 7.4e-32 141.0 142 55.6
Peaxi162Scf00412g00063 Petunia axillaris HOM05D006043 ORTHO05D007309 7.4e-32 141.0 146 55.5
Sp3g08330 Schrenkiella parvula HOM05D006043 ORTHO05D007309 7.4e-32 141.0 142 54.2
Aqoxy1G00961 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 9.6e-32 140.6 146 56.2
Sopen09g003740 Solanum pennellii HOM05D006043 ORTHO05D007309 2.1e-31 139.4 146 56.2
AL3G21330 Arabidopsis lyrata HOM05D006043 ORTHO05D007309 2.8e-31 139.0 141 53.2
A03p35730 Brassica napus HOM05D006043 ORTHO05D007309 2.8e-31 139.0 141 54.6
BcaC05g29726 Brassica carinata HOM05D006043 ORTHO05D007309 3.7e-31 138.7 146 58.9
A05p39030 Brassica napus HOM05D006043 ORTHO05D007309 3.7e-31 138.7 143 54.5
Lj2P127T74 Lonicera japonica HOM05D006043 ORTHO05D007309 3.7e-31 138.7 134 56.7
SGA_v2.0_scaffold40G15419 Striga asiatica HOM05D006043 ORTHO05D007309 3.7e-31 138.7 144 63.9
AT3G10020 Arabidopsis thaliana HOM05D006043 ORTHO05D007309 8.1e-31 137.5 141 52.5
Thhalv10021699m.g Eutrema salsugineum HOM05D006043 ORTHO05D007309 8.1e-31 137.5 141 51.8
BcaB03g11578 Brassica carinata HOM05D006043 ORTHO05D007309 1.1e-30 137.1 141 53.9
BraA03t12747Z Brassica rapa HOM05D006043 ORTHO05D007309 1.1e-30 137.1 141 53.9
BcaC01g04256 Brassica carinata HOM05D006043 ORTHO05D007309 1.4e-30 136.7 141 53.9
Solyc09g008980.2 Solanum lycopersicum HOM05D006043 ORTHO05D007309 1.8e-30 136.3 145 55.9
Carub.0003s0912 Capsella rubella HOM05D006043 ORTHO05D007309 9.0e-30 134.0 141 51.8
C03p43400 Brassica napus HOM05D006043 ORTHO05D007309 1.2e-29 133.7 141 52.5
BolC3t16611H Brassica oleracea HOM05D006043 ORTHO05D007309 1.2e-29 133.7 141 54.6
Nn2g13971 Nelumbo nucifera HOM05D006043 ORTHO05D007309 1.2e-29 133.7 101 66.3
Nitab4.5_0001922g0090 Nicotiana tabacum HOM05D006043 ORTHO05D007309 2.0e-29 132.9 117 57.3
PGSC0003DMG400002724 Solanum tuberosum HOM05D006043 ORTHO05D007309 2.0e-29 132.9 146 53.4
CARHR084520 Cardamine hirsuta HOM05D006043 ORTHO05D007309 2.6e-29 132.5 142 52.1
Lsat_1_v5_gn_2_22321 Lactuca sativa HOM05D006043 ORTHO05D007309 5.8e-29 131.3 134 59.0
DCAR_009167 Daucus carota HOM05D006043 ORTHO05D007309 9.9e-29 130.6 140 52.1
Sed0027852 Sechium edule HOM05D006043 ORTHO05D007309 1.3e-28 130.2 131 54.2
EL10Ac7g17005 Beta vulgaris HOM05D006043 ORTHO05D007309 1.7e-28 129.8 142 51.4
Ah.08g211020 Amaranthus hybridus HOM05D006043 ORTHO05D007309 2.2e-28 129.4 147 52.4
PGSC0003DMG400002723 Solanum tuberosum HOM05D006043 ORTHO05D007309 6.4e-28 127.9 144 51.4
PGR004G1627 Punica granatum HOM05D006043 ORTHO05D007309 1.4e-27 126.7 128 57.0
Aqoxy2G01470 Aquilegia oxysepala HOM05D006043 ORTHO05D007309 5.5e-27 124.8 123 59.3
CAN.G824.34 Capsicum annuum HOM05D006043 ORTHO05D007309 1.6e-26 123.2 139 51.8
Nn6g35076 Nelumbo nucifera HOM05D006043 ORTHO05D007309 2.7e-26 122.5 133 57.1
PSO384G2483 Papaver somniferum HOM05D006043 ORTHO05D007309 7.9e-26 120.9 144 52.1
ECA126G0006 Erigeron canadensis HOM05D006043 ORTHO05D007309 1.0e-25 120.6 104 58.7
SalBow3G1044 Salvia bowleyana HOM05D006043 ORTHO05D007309 3.0e-25 119.0 144 50.0
THA.LOC104816380 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 3.9e-25 118.6 140 46.4
Thecc.05G079900 Theobroma cacao HOM05D006043 ORTHO05D007309 2.5e-24 115.9 140 47.9
BolC8t51238H Brassica oleracea HOM05D006043 ORTHO05D007309 5.6e-24 114.8 131 49.6
Zm00001eb406490 Zea mays HOM05D006043 ORTHO05D007309 8.2e-23 110.9 137 48.2
Solyc09g008970.1 Solanum lycopersicum HOM05D006043 ORTHO05D007309 1.1e-22 110.5 146 46.6
Lj4P368T6 Lonicera japonica HOM05D006043 ORTHO05D007309 9.0e-22 107.5 78 71.8
TAR334G0001 Trochodendron aralioides HOM05D006043 ORTHO05D007309 4.5e-21 105.1 78 73.1
TAR369G1076 Trochodendron aralioides HOM05D006043 ORTHO05D007309 4.5e-21 105.1 78 73.1
Sopen09g003730 Solanum pennellii HOM05D006043 ORTHO05D007309 1.0e-20 104.0 140 47.1
HPP92_021571 Vanilla planifolia HOM05D006043 ORTHO05D007309 1.3e-20 103.6 126 43.7
Os12g0147200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 3.8e-20 102.1 137 47.4
TWI13G0012 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 4.9e-20 101.7 103 56.3
TWI74G0769 Tripterygium wilfordii HOM05D006043 ORTHO05D007309 4.9e-20 101.7 103 56.3
Prupe.7G091800 Prunus persica HOM05D006043 ORTHO05D007309 6.5e-20 101.3 86 60.5
Os11g0149200 Oryza sativa ssp. japonica HOM05D006043 ORTHO05D007309 1.9e-19 99.8 135 46.7
C08p36560 Brassica napus HOM05D006043 ORTHO05D007309 6.3e-15 84.7 97 49.5
THA.LOC104823222 Tarenaya hassleriana HOM05D006043 ORTHO05D007309 5.3e-14 81.6 71 53.5
AUR62033593 Chenopodium quinoa HOM05D006043 ORTHO05D007309 3.4e-13 79.0 132 43.2
BcaC03g16179 Brassica carinata HOM05D006043 ORTHO05D007309 4.5e-13 78.6 97 47.4
C02p39530 Brassica napus HOM05D006043 ORTHO05D007309 1.3e-12 77.0 97 46.4
BolC2t09966H Brassica oleracea HOM05D006043 ORTHO05D007309 1.3e-12 77.0 97 46.4
SEGI_20897 Sequoiadendron giganteum HOM05D006043 ORTHO05D007309 5.5e-11 71.6 104 42.3
AUR62037886 Chenopodium quinoa HOM05D006043 ORTHO05D007309 7.4e-08 61.2 64 53.1
Nn1g08859 Nelumbo nucifera HOM05D006043 ORTHO05D007309 1.3e-07 60.5 70 52.9
SMO347G0034 Selaginella moellendorffii HOM05D006043 ORTHO05D007309 3.7e-07 58.9 130 34.6
Mapoly0058s0037 Marchantia polymorpha HOM05D006043 ORTHO05D007309 8.2e-07 57.8 115 37.4
SMO358G0245 Selaginella moellendorffii HOM05D006043 ORTHO05D007309 6.9e-06 54.7 67 47.8


User provided reference genes

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