Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv21209 Davidia involucrata HOM05D005696 ORTHO05D007099 1.0e-105 386.7 191 100.0
Duzib106G0894 Durio zibethinus HOM05D005696 ORTHO05D007099 1.9e-72 276.2 158 83.5
Thecc.05G089100 Theobroma cacao HOM05D005696 ORTHO05D007099 1.6e-71 273.1 158 81.0
COL.COLO4_29734 Corchorus olitorius HOM05D005696 ORTHO05D007099 2.8e-71 272.3 158 80.4
CSS0033781 Camellia sinensis var. sinensis HOM05D005696 ORTHO05D007099 1.8e-70 269.6 167 78.4
Hma1.2p1_0084F.1_g043820 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 6.9e-70 267.7 158 83.5
Hma1.2p1_0820F.1_g223835 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 6.9e-70 267.7 158 83.5
Atru.chr8.1538 Acer truncatum HOM05D005696 ORTHO05D007099 1.2e-69 266.9 158 79.1
Manes.08G025300 Manihot esculenta HOM05D005696 ORTHO05D007099 1.2e-69 266.9 158 82.3
GSVIVG01033843001 Vitis vinifera HOM05D005696 ORTHO05D007099 1.2e-69 266.9 158 80.4
Oeu017678.1 Olea europaea HOM05D005696 ORTHO05D007099 1.5e-69 266.5 158 82.9
Oeu017679.1 Olea europaea HOM05D005696 ORTHO05D007099 1.5e-69 266.5 158 82.9
Potri.018G086400 Populus trichocarpa HOM05D005696 ORTHO05D007099 2.6e-69 265.8 149 86.6
Sabra18G0074700 Salix brachista HOM05D005696 ORTHO05D007099 2.6e-69 265.8 147 85.0
ClCG10G018970 Citrullus lanatus HOM05D005696 ORTHO05D007099 4.5e-69 265.0 177 74.6
Sed0022063 Sechium edule HOM05D005696 ORTHO05D007099 1.3e-68 263.5 156 78.2
Lj2P1003T8 Lonicera japonica HOM05D005696 ORTHO05D007099 3.8e-68 261.9 153 81.0
MELO3C009473.2 Cucumis melo HOM05D005696 ORTHO05D007099 6.4e-68 261.2 156 80.8
CsaV3_3G037280 Cucumis sativus L. HOM05D005696 ORTHO05D007099 1.1e-67 260.4 156 78.2
ECA240G0707 Erigeron canadensis HOM05D005696 ORTHO05D007099 1.1e-67 260.4 158 78.5
Lj2P137T17 Lonicera japonica HOM05D005696 ORTHO05D007099 1.1e-67 260.4 153 81.7
Rhsim03G0075100 Rhododendron simsii HOM05D005696 ORTHO05D007099 1.1e-67 260.4 149 85.2
MSTRG.19260 Avicennia marina HOM05D005696 ORTHO05D007099 1.4e-67 260.0 158 76.6
MD06G1040400 Malus domestica HOM05D005696 ORTHO05D007099 1.4e-67 260.0 149 83.2
PGR142G1689 Punica granatum HOM05D005696 ORTHO05D007099 1.4e-67 260.0 158 78.5
Cc03_g11090 Coffea canephora HOM05D005696 ORTHO05D007099 1.9e-67 259.6 150 81.3
arahy.Tifrunner.gnm1.ann1.NXU1NB Arachis hypogaea HOM05D005696 ORTHO05D007099 2.4e-67 259.2 152 80.3
Gorai.002G158300 Gossypium raimondii HOM05D005696 ORTHO05D007099 4.2e-67 258.5 158 77.2
TWI53G1247 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 4.2e-67 258.5 149 79.9
CiPaw.09G014000 Carya illinoinensis HOM05D005696 ORTHO05D007099 9.3e-67 257.3 166 72.9
Cfa016607 Carpinus fangiana HOM05D005696 ORTHO05D007099 2.7e-66 255.8 150 80.0
Gohir.D01G127700 Gossypium hirsutum HOM05D005696 ORTHO05D007099 2.7e-66 255.8 158 76.6
QL07p039009 Quercus lobata HOM05D005696 ORTHO05D007099 2.7e-66 255.8 151 78.1
Ca_09006_v3 Cicer arietinum L. HOM05D005696 ORTHO05D007099 4.6e-66 255.0 151 78.8
Hma1.2p1_0232F.1_g097930 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 6.0e-66 254.6 149 80.5
TPR.G22495 Trifolium pratense HOM05D005696 ORTHO05D007099 6.0e-66 254.6 151 79.5
Rhsim03G0187900 Rhododendron simsii HOM05D005696 ORTHO05D007099 7.9e-66 254.2 153 79.1
QL07p038757 Quercus lobata HOM05D005696 ORTHO05D007099 1.0e-65 253.8 157 75.2
Sed0001709 Sechium edule HOM05D005696 ORTHO05D007099 1.0e-65 253.8 156 75.6
Haze_19611 Corylus avellana HOM05D005696 ORTHO05D007099 1.8e-65 253.1 158 76.6
Gohir.A01G138000 Gossypium hirsutum HOM05D005696 ORTHO05D007099 2.3e-65 252.7 158 75.3
SGA_v2.0_scaffold75G24749 Striga asiatica HOM05D005696 ORTHO05D007099 2.3e-65 252.7 153 77.1
CANSAT80G0528 Cannabis sativa HOM05D005696 ORTHO05D007099 3.0e-65 252.3 158 77.8
Sc02g0000250 Simmondsia chinensis HOM05D005696 ORTHO05D007099 3.9e-65 251.9 160 73.8
TPR.G19517 Trifolium pratense HOM05D005696 ORTHO05D007099 3.9e-65 251.9 151 78.1
SalBow3G1016 Salvia bowleyana HOM05D005696 ORTHO05D007099 5.1e-65 251.5 156 76.9
Ciclev10012817m.g Citrus clementina HOM05D005696 ORTHO05D007099 6.7e-65 251.1 149 77.9
TWI77G0870 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 6.7e-65 251.1 149 79.2
HanXRQChr03g0060731 Helianthus annuus HOM05D005696 ORTHO05D007099 8.7e-65 250.8 158 74.1
Lalb_Chr01g0018151 Lupinus albus HOM05D005696 ORTHO05D007099 8.7e-65 250.8 148 81.1
Medtr7g104610 Medicago truncatula HOM05D005696 ORTHO05D007099 8.7e-65 250.8 151 76.2
DCAR_013385 Daucus carota HOM05D005696 ORTHO05D007099 1.9e-64 249.6 158 75.9
Lsat_1_v5_gn_7_37701 Lactuca sativa HOM05D005696 ORTHO05D007099 3.3e-64 248.8 158 74.7
Nn2g14158 Nelumbo nucifera HOM05D005696 ORTHO05D007099 5.6e-64 248.1 150 77.3
Psat3g033280 Pisum sativum HOM05D005696 ORTHO05D007099 9.6e-64 247.3 149 76.5
AUR62028517 Chenopodium quinoa HOM05D005696 ORTHO05D007099 1.3e-63 246.9 160 71.2
MD14G1023000 Malus domestica HOM05D005696 ORTHO05D007099 1.3e-63 246.9 153 77.1
CAN.G397.49 Capsicum annuum HOM05D005696 ORTHO05D007099 2.1e-63 246.1 149 76.5
TPR.G30027 Trifolium pratense HOM05D005696 ORTHO05D007099 2.1e-63 246.1 150 76.0
Glyma.19G194929 Glycine max HOM05D005696 ORTHO05D007099 2.8e-63 245.7 151 76.2
Ah.01g020980 Amaranthus hybridus HOM05D005696 ORTHO05D007099 3.6e-63 245.4 160 71.9
Eucgr.K02040 Eucalyptus grandis HOM05D005696 ORTHO05D007099 3.6e-63 245.4 146 78.1
Nitab4.5_0000794g0110 Nicotiana tabacum HOM05D005696 ORTHO05D007099 6.2e-63 244.6 153 73.9
Solyc09g009780.4 Solanum lycopersicum HOM05D005696 ORTHO05D007099 6.2e-63 244.6 165 69.7
PGSC0003DMG400008956 Solanum tuberosum HOM05D005696 ORTHO05D007099 8.1e-63 244.2 158 72.8
RcHm_v2.0_Chr3g0473671 Rosa chinensis HOM05D005696 ORTHO05D007099 1.1e-62 243.8 153 75.8
FvH4_6g18700 Fragaria vesca HOM05D005696 ORTHO05D007099 1.4e-62 243.4 153 75.2
Glyma.03G195900 Glycine max HOM05D005696 ORTHO05D007099 1.8e-62 243.0 149 75.8
SalBow6G6426 Salvia bowleyana HOM05D005696 ORTHO05D007099 1.8e-62 243.0 158 72.2
EL10Ac7g16916 Beta vulgaris HOM05D005696 ORTHO05D007099 4.0e-62 241.9 148 75.7
TAR374G1347 Trochodendron aralioides HOM05D005696 ORTHO05D007099 4.0e-62 241.9 147 76.2
DCAR_007752 Daucus carota HOM05D005696 ORTHO05D007099 5.3e-62 241.5 158 71.5
FAN14G5868 Fragaria x ananassa HOM05D005696 ORTHO05D007099 6.9e-62 241.1 153 74.5
unitig_744.g24697 Utricularia gibba HOM05D001616 ORTHO05D007099 6.9e-62 241.1 160 70.6
Sopen09g004540 Solanum pennellii HOM05D005696 ORTHO05D007099 9.0e-62 240.7 158 72.2
Aqoxy1G00460 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 2.0e-61 239.6 151 72.8
FAN05G4755 Fragaria x ananassa HOM05D005696 ORTHO05D007099 2.0e-61 239.6 153 73.9
VMungo1383G2828 Vigna mungo HOM05D005696 ORTHO05D007099 3.4e-61 238.8 148 75.7
Phvul.001G189800 Phaseolus vulgaris HOM05D005696 ORTHO05D007099 1.7e-60 236.5 149 74.5
Prupe.7G110200 Prunus persica HOM05D005696 ORTHO05D007099 3.8e-60 235.3 146 75.3
Aqoxy2G01202 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 4.9e-60 235.0 148 75.7
HanXRQChr07g0189921 Helianthus annuus HOM05D005696 ORTHO05D007099 6.4e-60 234.6 157 71.3
Aa31LG5G12820 Aethionema arabicum HOM05D005696 ORTHO05D007099 1.1e-59 233.8 160 70.0
Cpa.g.sc5.19 Carica papaya HOM05D005696 ORTHO05D007099 1.1e-59 233.8 152 73.0
THA.LOC104820979 Tarenaya hassleriana HOM05D005696 ORTHO05D007099 5.5e-59 231.5 156 72.4
CiPaw.10G009800 Carya illinoinensis HOM05D005696 ORTHO05D007099 3.5e-58 228.8 138 76.1
Dinv31687 Davidia involucrata HOM05D005696 ORTHO05D010438 3.5e-58 228.8 127 89.0
MBI04_g14262_MAGBIO Magnolia biondii HOM05D005696 ORTHO05D007099 3.5e-58 228.8 143 75.5
AL6G26610 Arabidopsis lyrata HOM05D005696 ORTHO05D007099 1.8e-57 226.5 148 71.6
AT5G15770 Arabidopsis thaliana HOM05D005696 ORTHO05D007099 1.8e-57 226.5 146 72.6
Sp6g28350 Schrenkiella parvula HOM05D005696 ORTHO05D007099 8.7e-57 224.2 148 70.3
Carub.0006s1392 Capsella rubella HOM05D005696 ORTHO05D007099 2.5e-56 222.6 146 70.5
Thhalv10014892m.g Eutrema salsugineum HOM05D005696 ORTHO05D007099 2.5e-56 222.6 148 70.3
BolC9t58974H Brassica oleracea HOM05D005696 ORTHO05D007099 7.4e-56 221.1 151 68.9
C02p07960 Brassica napus HOM05D005696 ORTHO05D007099 9.6e-56 220.7 150 68.7
C09p61330 Brassica napus HOM05D005696 ORTHO05D007099 1.3e-55 220.3 148 69.6
BraA02t05292Z Brassica rapa HOM05D005696 ORTHO05D007099 2.1e-55 219.5 150 67.3
A02p03210 Brassica napus HOM05D005696 ORTHO05D007099 6.2e-55 218.0 150 66.7
A10p23260 Brassica napus HOM05D005696 ORTHO05D007099 8.1e-55 217.6 148 67.6
BraA10t44394Z Brassica rapa HOM05D005696 ORTHO05D007099 1.1e-54 217.2 148 67.6
PSO339G3505 Papaver somniferum HOM05D005696 ORTHO05D007099 1.1e-54 217.2 148 68.2
Aa31LG11G13810 Aethionema arabicum HOM05D005696 ORTHO05D007099 1.8e-54 216.5 150 69.3
BcaC03g18448 Brassica carinata HOM05D005696 ORTHO05D007099 1.8e-54 216.5 150 67.3
BolC2t06719H Brassica oleracea HOM05D005696 ORTHO05D007099 1.8e-54 216.5 150 67.3
PSO384G1553 Papaver somniferum HOM05D005696 ORTHO05D007099 4.0e-54 215.3 148 67.6
CARHR197560 Cardamine hirsuta HOM05D005696 ORTHO05D007099 1.2e-53 213.8 146 67.8
SHI28289 Sapria himalayana HOM05D005696 ORTHO05D007099 1.2e-53 213.8 142 68.3
BcaNung02203 Brassica carinata HOM05D005696 ORTHO05D007099 2.0e-53 213.0 148 66.2
ATR0618G201 Amborella trichopoda HOM05D005696 ORTHO05D007099 6.5e-52 208.0 146 67.8
SEGI_17930 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 5.5e-51 204.9 172 57.0
HPP92_015765 Vanilla planifolia HOM05D005696 ORTHO05D007099 2.3e-49 199.5 156 58.3
ATR0605G169 Amborella trichopoda HOM05D005696 ORTHO05D007099 8.7e-49 197.6 145 64.1
BcaC04g18939 Brassica carinata HOM05D005696 ORTHO05D007099 1.9e-48 196.4 148 65.5
Peaxi162Scf00006g00016 Petunia axillaris HOM05D005696 ORTHO05D007099 6.3e-47 191.4 131 72.5
FAN09G4491 Fragaria x ananassa HOM05D005696 ORTHO05D007099 2.2e-44 183.0 122 71.3
Migut.C00979 Erythranthe guttata HOM05D005696 ORTHO05D007099 7.9e-42 174.5 99 82.8
AagrBONN_evm.TU.Sc2ySwM_344.341 Anthoceros agrestis HOM05D005696 ORTHO05D007099 3.9e-41 172.2 148 53.4
Os09g0488000 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 5.7e-40 168.3 146 51.4
SMO364G0918 Selaginella moellendorffii HOM05D005696 ORTHO05D007099 9.7e-40 167.5 131 59.5
Peaxi162Scf00068g02511 Petunia axillaris HOM05D005696 ORTHO05D007099 2.8e-39 166.0 110 74.5
Mapoly0046s0019 Marchantia polymorpha HOM05D005696 ORTHO05D007099 1.2e-37 160.6 144 54.9
Zm00001eb189250 Zea mays HOM05D005696 ORTHO05D007099 5.9e-37 158.3 148 50.0
Aqoxy5G03051 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 8.5e-36 154.5 100 72.0
VMungo0540G0323 Vigna mungo HOM05D005696 ORTHO05D007099 3.2e-35 152.5 134 59.7
Os02g0717700 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 4.2e-35 152.1 145 49.0
MCO13G065 Micromonas commoda HOM05D005696 ORTHO05D007099 8.8e-33 144.4 143 51.7
SEGI_26718 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 2.2e-31 139.8 121 56.2
Cre12.g560200 Chlamydomonas reinhardtii HOM05D005696 ORTHO05D007099 6.3e-31 138.3 145 51.0
PRCOL_00001568 Prasinoderma coloniale HOM05D005696 ORTHO05D007099 9.1e-30 134.4 141 48.9
CBR_g37710 Chara braunii HOM05D005696 ORTHO05D007099 5.2e-25 118.6 154 41.6
VMungo1383G2413 Vigna mungo HOM05D005696 ORTHO05D007099 5.7e-24 115.2 148 45.9
MD12G1036200 Malus domestica HOM05D005696 ORTHO05D007099 7.4e-24 114.8 83 67.5
Pp3c14_20090 Physcomitrium patens HOM05D005696 ORTHO05D007099 1.8e-22 110.2 85 61.2
AagrBONN_evm.TU.Sc2ySwM_362.2223 Anthoceros agrestis HOM05D005696 ORTHO05D007099 2.0e-21 106.7 84 56.0


User provided reference genes

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