Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 1.0e-108 396.7 197 100.0
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 3.2e-78 295.4 197 74.6
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 1.1e-67 260.4 199 70.4
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 1.6e-66 256.5 201 65.2
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 4.0e-65 251.9 196 65.8
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 4.0e-65 251.9 201 69.2
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 5.8e-64 248.1 197 65.0
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 3.8e-63 245.4 206 65.5
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 3.8e-63 245.4 150 79.3
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 4.9e-63 245.0 199 69.8
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 4.9e-63 245.0 199 69.8
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 1.1e-62 243.8 200 67.0
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 6.0e-61 238.0 199 63.8
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 1.0e-60 237.3 198 62.1
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 5.1e-60 235.0 201 61.7
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 5.1e-60 235.0 197 65.5
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 6.6e-60 234.6 149 77.2
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 8.7e-60 234.2 198 63.1
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 8.7e-60 234.2 201 61.2
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 1.5e-59 233.4 177 65.5
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 1.5e-59 233.4 197 65.5
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 1.5e-59 233.4 192 62.0
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 2.5e-59 232.6 200 60.0
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 3.3e-59 232.3 198 60.6
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 4.3e-59 231.9 201 61.2
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 4.3e-59 231.9 156 75.0
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 9.6e-59 230.7 143 79.0
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 1.6e-58 229.9 158 72.8
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 2.1e-58 229.6 200 61.0
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 4.8e-58 228.4 172 68.0
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 4.8e-58 228.4 140 78.6
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 4.8e-58 228.4 198 62.6
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 8.1e-58 227.6 193 63.2
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 6.9e-57 224.6 201 59.7
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 9.0e-57 224.2 146 75.3
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 2.0e-56 223.0 202 59.4
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 4.5e-56 221.9 148 71.6
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 4.5e-56 221.9 152 71.1
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 1.7e-55 219.9 198 62.6
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 2.9e-55 219.2 200 60.0
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 3.8e-55 218.8 141 74.5
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 1.9e-54 216.5 148 71.6
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 2.4e-54 216.1 198 59.1
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 1.6e-53 213.4 145 71.7
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 2.7e-53 212.6 197 59.9
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 2.7e-53 212.6 197 60.4
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 1.0e-52 210.7 199 59.3
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 1.0e-52 210.7 170 64.1
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 1.3e-52 210.3 199 57.8
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 1.3e-52 210.3 114 86.0
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 3.0e-52 209.1 139 72.7
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 3.9e-52 208.8 155 65.2
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 3.9e-52 208.8 137 72.3
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 6.7e-52 208.0 138 71.0
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 1.9e-51 206.5 182 58.8
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 1.9e-51 206.5 146 68.5
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 3.3e-51 205.7 114 85.1
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 5.6e-51 204.9 136 72.1
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 2.1e-50 203.0 124 75.0
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 3.7e-50 202.2 169 61.5
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 8.1e-50 201.1 201 55.7
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 1.8e-49 199.9 124 74.2
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 2.4e-49 199.5 203 55.2
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 4.0e-49 198.7 141 68.8
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 1.2e-48 197.2 127 74.0
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 2.6e-48 196.1 157 66.9
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 7.6e-48 194.5 190 58.9
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 6.5e-47 191.4 126 73.0
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 6.5e-47 191.4 126 73.0
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 8.4e-47 191.0 138 70.3
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 8.4e-47 191.0 126 73.0
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 1.4e-46 190.3 137 72.3
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 1.9e-46 189.9 202 53.5
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 4.2e-46 188.7 201 56.2
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 1.2e-45 187.2 125 72.8
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 1.2e-45 187.2 125 72.8
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 1.2e-45 187.2 138 69.6
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 1.2e-45 187.2 200 54.0
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 1.6e-45 186.8 146 65.8
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 1.6e-45 186.8 125 71.2
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 2.1e-45 186.4 126 71.4
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 1.0e-44 184.1 132 72.7
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 1.3e-44 183.7 140 67.1
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 1.3e-44 183.7 138 65.9
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 1.3e-44 183.7 123 72.4
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 1.5e-43 180.3 184 55.4
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 3.7e-42 175.6 121 71.1
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 1.4e-41 173.7 139 65.5
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 1.4e-41 173.7 139 65.5
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 5.3e-41 171.8 149 59.7
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 1.3e-39 167.2 203 49.8
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 2.9e-39 166.0 132 65.2
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 8.2e-34 147.9 119 59.7
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 4.5e-32 142.1 128 55.5
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 4.5e-32 142.1 379 30.9
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 5.9e-32 141.7 118 58.5
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 3.8e-31 139.0 129 54.3
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 1.6e-29 133.7 82 75.6
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 3.9e-28 129.0 82 74.4
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 6.3e-26 121.7 93 63.4
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 1.8e-25 120.2 93 62.4
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 3.6e-21 105.9 80 65.0
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 3.6e-13 79.3 53 71.7
Ciclev10013843m.g Citrus clementina HOM05D007282 ORTHO05D009214 6.7e-12 75.1 102 45.1
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 1.1e-11 74.3 52 67.3
MD12G1029500 Malus domestica HOM05D007282 ORTHO05D009214 1.7e-07 60.5 50 64.0
PRCOL_00001877 Prasinoderma coloniale HOM05D007282 ORTHO05D009214 5.0e-07 58.9 118 31.4
MD14G1029800 Malus domestica HOM05D007282 ORTHO05D009214 1.9e-06 57.0 82 45.1


User provided reference genes

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