Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv21156 Davidia involucrata HOM05D003709 ORTHO05D004364 1.6e-74 282.7 152 100.0
Dinv31727 Davidia involucrata HOM05D003709 ORTHO05D004364 2.8e-34 149.1 106 72.6
Hma1.2p1_0245F.1_g101590 Hydrangea macrophylla HOM05D003709 ORTHO05D004364 2.7e-32 142.5 106 69.8
CSS0019397 Camellia sinensis var. sinensis HOM05D003709 ORTHO05D004364 3.5e-32 142.1 105 70.5
vmacro07432 Vaccinium macrocarpon HOM05D003709 ORTHO05D004364 4.5e-32 141.7 93 76.3
CSS0033506 Camellia sinensis var. sinensis HOM05D003709 ORTHO05D004364 7.7e-32 141.0 105 69.5
Cpa.g.c29173.2 Carica papaya HOM05D003709 ORTHO05D004364 1.0e-31 140.6 106 68.9
GSVIVG01033901001 Vitis vinifera HOM05D003709 ORTHO05D004364 1.7e-31 139.8 103 69.9
Hma1.2p1_1724F.1_g299425 Hydrangea macrophylla HOM05D003709 ORTHO05D004364 2.2e-31 139.4 91 79.1
CSS0048031 Camellia sinensis var. sinensis HOM05D003709 ORTHO05D004364 5.0e-31 138.3 105 68.6
Lj1C125T5 Lonicera japonica HOM05D003709 ORTHO05D004364 5.0e-31 138.3 109 67.9
Actinidia05396 Actinidia chinensis HOM05D003709 ORTHO05D004364 4.2e-30 135.2 118 62.7
Duzib093G0911 Durio zibethinus HOM05D003709 ORTHO05D004364 7.2e-30 134.4 106 65.1
SGA_v2.0_scaffold13G06687 Striga asiatica HOM05D003709 ORTHO05D004364 7.2e-30 134.4 91 74.7
QL07p038048 Quercus lobata HOM05D003709 ORTHO05D004364 1.2e-29 133.7 96 74.0
Thecc.05G096700 Theobroma cacao HOM05D003709 ORTHO05D004364 1.2e-29 133.7 106 64.2
CiPaw.10G014600 Carya illinoinensis HOM05D003709 ORTHO05D004364 2.1e-29 132.9 90 76.7
TWI77G0334 Tripterygium wilfordii HOM05D003709 ORTHO05D004364 2.1e-29 132.9 108 63.9
Actinidia12698 Actinidia chinensis HOM05D003709 ORTHO05D004364 2.7e-29 132.5 93 71.0
Actinidia18412 Actinidia chinensis HOM05D003709 ORTHO05D004364 2.7e-29 132.5 93 71.0
MBI17_g01496_MAGBIO Magnolia biondii HOM05D003709 ORTHO05D004364 2.7e-29 132.5 103 66.0
RcHm_v2.0_Chr6g0269071 Rosa chinensis HOM05D003709 ORTHO05D004364 2.7e-29 132.5 93 69.9
PSO357G0160 Papaver somniferum HOM05D003709 ORTHO05D004364 3.6e-29 132.1 93 71.0
CANSAT64G1889 Cannabis sativa HOM05D003709 ORTHO05D004364 4.7e-29 131.7 110 63.6
Oeu007203.1 Olea europaea HOM05D003709 ORTHO05D004364 4.7e-29 131.7 106 67.9
DCAR_020733 Daucus carota HOM05D003709 ORTHO05D004364 6.1e-29 131.3 103 67.0
FAN15G3210 Fragaria x ananassa HOM05D003709 ORTHO05D004364 8.0e-29 131.0 107 62.6
FvH4_2g10910 Fragaria vesca HOM05D003709 ORTHO05D004364 1.0e-28 130.6 107 62.6
FAN20G0151 Fragaria x ananassa HOM05D003709 ORTHO05D004364 1.0e-28 130.6 107 62.6
FAN24G0281 Fragaria x ananassa HOM05D003709 ORTHO05D004364 1.0e-28 130.6 107 62.6
MSTRG.5871 Avicennia marina HOM05D003709 ORTHO05D004364 1.4e-28 130.2 106 65.1
Eucgr.A02626 Eucalyptus grandis HOM05D003709 ORTHO05D004364 1.4e-28 130.2 93 72.0
FAN27G1255 Fragaria x ananassa HOM05D003709 ORTHO05D004364 2.3e-28 129.4 107 61.7
Gohir.D09G133000 Gossypium hirsutum HOM05D003709 ORTHO05D004364 2.3e-28 129.4 93 69.9
Nitab4.5_0001801g0070 Nicotiana tabacum HOM05D003709 ORTHO05D004364 2.3e-28 129.4 93 69.9
ECA247G0210 Erigeron canadensis HOM05D003709 ORTHO05D004364 3.0e-28 129.0 107 63.6
Manes.08G029100 Manihot esculenta HOM05D003709 ORTHO05D004364 3.0e-28 129.0 104 65.4
Glyma.03G198800 Glycine max HOM05D003709 ORTHO05D004364 5.2e-28 128.3 106 64.2
Glyma.19G196500 Glycine max HOM05D003709 ORTHO05D004364 5.2e-28 128.3 106 65.1
Gorai.006G152500 Gossypium raimondii HOM05D003709 ORTHO05D004364 5.2e-28 128.3 93 68.8
Sopen10g032700 Solanum pennellii HOM05D003709 ORTHO05D004364 8.8e-28 127.5 93 69.9
PGSC0003DMG400028247 Solanum tuberosum HOM05D003709 ORTHO05D004364 8.8e-28 127.5 93 69.9
Cc06_g06250 Coffea canephora HOM05D003709 ORTHO05D004364 1.2e-27 127.1 107 66.4
Gohir.A09G141700 Gossypium hirsutum HOM05D003709 ORTHO05D004364 1.5e-27 126.7 93 68.8
Lj2g0024912 Lotus japonicus HOM05D003709 ORTHO05D004364 1.5e-27 126.7 93 69.9
CAN.G841.14 Capsicum annuum HOM05D003709 ORTHO05D004364 2.6e-27 125.9 93 68.8
Gohir.A04G147400 Gossypium hirsutum HOM05D003709 ORTHO05D004364 2.6e-27 125.9 92 70.7
Peaxi162Scf00096g00098 Petunia axillaris HOM05D003709 ORTHO05D004364 3.4e-27 125.6 93 68.8
Gohir.A10G101550 Gossypium hirsutum HOM05D003709 ORTHO05D004364 4.4e-27 125.2 103 63.1
Gorai.007G357100 Gossypium raimondii HOM05D003709 ORTHO05D004364 5.7e-27 124.8 103 63.1
Nn6g34801 Nelumbo nucifera HOM05D003709 ORTHO05D004364 5.7e-27 124.8 106 63.2
Ca_09030_v3 Cicer arietinum L. HOM05D003709 ORTHO05D004364 9.8e-27 124.0 106 62.3
ClCG03G000710 Citrullus lanatus HOM05D003709 ORTHO05D004364 9.8e-27 124.0 104 63.5
Gorai.004G000400 Gossypium raimondii HOM05D003709 ORTHO05D004364 9.8e-27 124.0 93 67.7
MD10G1058500 Malus domestica HOM05D003709 ORTHO05D004364 9.8e-27 124.0 93 68.8
AUR62006246 Chenopodium quinoa HOM05D003709 ORTHO05D004364 1.3e-26 123.6 106 66.0
Psat3g030960 Pisum sativum HOM05D003709 ORTHO05D004364 1.3e-26 123.6 93 72.0
Prupe.8G077900 Prunus persica HOM05D003709 ORTHO05D004364 1.3e-26 123.6 106 62.3
Lsat_1_v5_gn_9_14520 Lactuca sativa HOM05D003709 ORTHO05D004364 1.7e-26 123.2 93 67.7
PGR004G2656 Punica granatum HOM05D003709 ORTHO05D004364 1.7e-26 123.2 93 67.7
Lalb_Chr20g0111541 Lupinus albus HOM05D003709 ORTHO05D004364 2.2e-26 122.9 106 64.2
AUR62028486 Chenopodium quinoa HOM05D003709 ORTHO05D004364 2.8e-26 122.5 96 70.8
HanXRQChr08g0228531 Helianthus annuus HOM05D003709 ORTHO05D004364 2.8e-26 122.5 93 68.8
Migut.J00663 Erythranthe guttata HOM05D003709 ORTHO05D004364 6.3e-26 121.3 94 67.0
HanXRQChr04g0114081 Helianthus annuus HOM05D003709 ORTHO05D004364 6.3e-26 121.3 93 67.7
MD05G1051100 Malus domestica HOM05D003709 ORTHO05D004364 6.3e-26 121.3 93 67.7
Rhsim03G0069600 Rhododendron simsii HOM05D003709 ORTHO05D004364 6.3e-26 121.3 131 53.4
Sed0021250 Sechium edule HOM05D003709 ORTHO05D004364 6.3e-26 121.3 108 61.1
TAR623G0195 Trochodendron aralioides HOM05D003709 ORTHO05D004364 6.3e-26 121.3 93 65.6
CsaV3_3G037560 Cucumis sativus L. HOM05D003709 ORTHO05D004364 8.3e-26 120.9 93 68.8
Gohir.A01G177700 Gossypium hirsutum HOM05D003709 ORTHO05D004364 8.3e-26 120.9 103 61.2
Gohir.A13G235900 Gossypium hirsutum HOM05D003709 ORTHO05D004364 1.1e-25 120.6 93 65.6
Aqoxy4G02712 Aquilegia oxysepala HOM05D003709 ORTHO05D004364 1.4e-25 120.2 93 67.7
PSO339G2742 Papaver somniferum HOM05D003709 ORTHO05D004364 1.4e-25 120.2 94 68.1
Solyc10g083220.3 Solanum lycopersicum HOM05D003709 ORTHO05D004364 2.4e-25 119.4 93 69.9
Phvul.001G193000 Phaseolus vulgaris HOM05D003709 ORTHO05D004364 3.1e-25 119.0 106 63.2
VMungo1383G1751 Vigna mungo HOM05D003709 ORTHO05D004364 3.1e-25 119.0 93 69.9
THA.LOC104803461 Tarenaya hassleriana HOM05D003709 ORTHO05D004364 4.1e-25 118.6 106 60.4
THA.LOC104826817 Tarenaya hassleriana HOM05D003709 ORTHO05D004364 4.1e-25 118.6 106 60.4
arahy.Tifrunner.gnm1.ann1.K65CIQ Arachis hypogaea HOM05D003709 ORTHO05D004364 5.4e-25 118.2 93 71.0
Ciclev10012932m.g Citrus clementina HOM05D003709 ORTHO05D004364 5.4e-25 118.2 95 67.4
Ciclev10013818m.g Citrus clementina HOM05D003709 ORTHO05D004364 5.4e-25 118.2 95 68.4
Atru.chr8.1435 Acer truncatum HOM05D003709 ORTHO05D004364 7.0e-25 117.9 94 69.1
arahy.Tifrunner.gnm1.ann1.VRIY4R Arachis hypogaea HOM05D003709 ORTHO05D004364 9.1e-25 117.5 93 69.9
MELO3C009499.2 Cucumis melo HOM05D003709 ORTHO05D004364 1.2e-24 117.1 93 65.6
CDE04G0652 Ceratophyllum demersum HOM05D003709 ORTHO05D004364 1.6e-24 116.7 106 58.5
Gohir.A13G149700 Gossypium hirsutum HOM05D003709 ORTHO05D004364 2.0e-24 116.3 103 59.2
EL10Ac7g16841 Beta vulgaris HOM05D003709 ORTHO05D004364 2.7e-24 115.9 93 66.7
EL10Ac7g16842 Beta vulgaris HOM05D003709 ORTHO05D004364 2.7e-24 115.9 93 66.7
TPR.G23331 Trifolium pratense HOM05D003709 ORTHO05D004364 4.5e-24 115.2 109 59.6
HPP92_028584 Vanilla planifolia HOM05D003709 ORTHO05D004364 4.5e-24 115.2 93 62.4
Potri.016G074700 Populus trichocarpa HOM05D003709 ORTHO05D004364 5.9e-24 114.8 109 59.6
Gorai.002G197000 Gossypium raimondii HOM05D003709 ORTHO05D004364 1.7e-23 113.2 107 57.0
Sabra16G0080200 Salix brachista HOM05D003709 ORTHO05D004364 1.7e-23 113.2 111 58.6
Nitab4.5_0005187g0010 Nicotiana tabacum HOM05D003709 ORTHO05D004364 2.2e-23 112.8 93 67.7
Medtr7g105350 Medicago truncatula HOM05D003709 ORTHO05D004364 2.9e-23 112.5 106 57.5
Aa31LG11G7240 Aethionema arabicum HOM05D003709 ORTHO05D004364 3.8e-23 112.1 109 57.8
Haze_19671 Corylus avellana HOM05D003709 ORTHO05D004364 3.8e-23 112.1 110 58.2
Aa31sc52G10 Aethionema arabicum HOM05D003709 ORTHO05D004364 1.1e-22 110.5 92 65.2
Sabra06G0074500 Salix brachista HOM05D003709 ORTHO05D004364 1.5e-22 110.2 96 61.5
Ah.15g090600 Amaranthus hybridus HOM05D003709 ORTHO05D004364 1.9e-22 109.8 93 62.4
Thhalv10014881m.g Eutrema salsugineum HOM05D003709 ORTHO05D004364 4.2e-22 108.6 107 57.9
A10p30240 Brassica napus HOM05D003709 ORTHO05D004364 5.5e-22 108.2 109 56.9
BraA10t45062Z Brassica rapa HOM05D003709 ORTHO05D004364 5.5e-22 108.2 109 56.9
BcaB01g05734 Brassica carinata HOM05D003709 ORTHO05D004364 7.2e-22 107.8 109 56.9
BcaC06g32330 Brassica carinata HOM05D003709 ORTHO05D004364 7.2e-22 107.8 93 62.4
BcaC06g32333 Brassica carinata HOM05D003709 ORTHO05D004364 7.2e-22 107.8 93 62.4
C09p70650 Brassica napus HOM05D003709 ORTHO05D004364 7.2e-22 107.8 93 62.4
BolC9t59821H Brassica oleracea HOM05D003709 ORTHO05D004364 7.2e-22 107.8 93 62.4
Sp6g36640 Schrenkiella parvula HOM05D003709 ORTHO05D004364 9.5e-22 107.5 109 56.9
CARHR206940 Cardamine hirsuta HOM05D003709 ORTHO05D004364 1.6e-21 106.7 93 61.3
AT5G06240 Arabidopsis thaliana HOM05D003709 ORTHO05D004364 2.1e-21 106.3 93 61.3
AL6G16240 Arabidopsis lyrata HOM05D003709 ORTHO05D004364 2.8e-21 105.9 93 61.3
A03p02630 Brassica napus HOM05D003709 ORTHO05D004364 4.7e-21 105.1 109 55.0
BraA03t09624Z Brassica rapa HOM05D003709 ORTHO05D004364 4.7e-21 105.1 109 55.0
Carub.0006s0511 Capsella rubella HOM05D003709 ORTHO05D004364 6.1e-21 104.8 93 61.3
Haze_19660 Corylus avellana HOM05D003709 ORTHO05D004364 4.0e-20 102.1 119 50.4
ATR0315G087 Amborella trichopoda HOM05D003709 ORTHO05D004364 1.7e-18 96.7 94 55.3
Hund28303 Selenicereus undatus HOM05D003709 ORTHO05D004364 2.2e-18 96.3 85 60.0
BcaB01g05985 Brassica carinata HOM05D003709 ORTHO05D004364 2.8e-18 95.9 113 51.3
Zm00001eb266720 Zea mays HOM05D003709 ORTHO05D004364 2.4e-17 92.8 112 47.3
Hma1.2p1_2017F.1_g311180 Hydrangea macrophylla HOM05D003709 ORTHO05D004364 4.1e-17 92.0 146 44.5
Os05g0112750 Oryza sativa ssp. japonica HOM05D003709 ORTHO05D004364 2.7e-16 89.4 106 47.2
Gorai.012G000500 Gossypium raimondii HOM05D003709 ORTHO05D004364 5.9e-16 88.2 135 43.7
unitig_744.g24704 Utricularia gibba HOM05D003709 ORTHO05D004364 5.9e-16 88.2 122 45.9
Gohir.A12G074200 Gossypium hirsutum HOM05D003709 ORTHO05D004364 8.6e-15 84.3 107 45.8
Gohir.D04G000040 Gossypium hirsutum HOM05D003709 ORTHO05D004364 1.5e-14 83.6 110 47.3
Actinidia27230 Actinidia chinensis HOM05D003709 ORTHO05D004364 4.3e-14 82.0 54 74.1
Actinidia28628 Actinidia chinensis HOM05D003709 ORTHO05D004364 4.3e-14 82.0 54 74.1
Actinidia37294 Actinidia chinensis HOM05D003709 ORTHO05D004364 4.3e-14 82.0 54 74.1
Hund28305 Selenicereus undatus HOM05D003709 ORTHO05D004364 4.3e-14 82.0 85 54.1
Sc20g0006470 Simmondsia chinensis HOM05D003709 ORTHO05D004364 9.5e-14 80.9 65 61.5
Nn2g14234 Nelumbo nucifera HOM05D003709 ORTHO05D004364 3.6e-13 79.0 80 57.5
Manes.09G051450 Manihot esculenta HOM05D003709 ORTHO05D004364 1.0e-12 77.4 72 61.1
Gohir.A05G416501 Gossypium hirsutum HOM05D001765 ORTHO05D003527 2.3e-12 76.3 55 67.3
Gohir.A05G416901 Gossypium hirsutum HOM05D001765 ORTHO05D003527 2.3e-12 76.3 55 67.3
COL.COLO4_29662 Corchorus olitorius HOM05D003709 ORTHO05D004364 6.8e-12 74.7 54 66.7
Haze_10129 Corylus avellana HOM05D003709 ORTHO05D004364 6.8e-12 74.7 59 66.1
Gohir.D02G000500 Gossypium hirsutum HOM05D003709 ORTHO05D004364 8.9e-12 74.3 129 40.3
Haze_00443 Corylus avellana HOM05D000273 ORTHO05D000198 3.4e-11 72.4 59 62.7
AUR62028484 Chenopodium quinoa HOM05D003709 ORTHO05D138253 5.7e-11 71.6 65 64.6
AUR62028485 Chenopodium quinoa HOM05D003709 ORTHO05D004364 5.7e-11 71.6 65 64.6
MD13G1200900 Malus domestica HOM05D003709 ORTHO05D004364 5.7e-11 71.6 55 63.6
Gohir.D11G326500 Gossypium hirsutum HOM05D003709 ORTHO05D004364 9.8e-11 70.9 56 62.5
MD07G1268900 Malus domestica HOM05D003709 ORTHO05D004364 1.3e-10 70.5 55 67.3
Lalb_Chr25g0288201 Lupinus albus HOM05D003709 ORTHO05D004364 1.7e-10 70.1 55 67.3
Peaxi162Scf00013g00154 Petunia axillaris HOM05D003709 ORTHO05D004364 3.7e-10 68.9 97 43.3
Gohir.D01G158750 Gossypium hirsutum HOM05D003709 ORTHO05D004364 6.4e-10 68.2 101 42.6
SGA_v2.0_scaffold123G33400 Striga asiatica HOM05D003709 ORTHO05D004364 1.4e-09 67.0 42 76.2
Pp3c3_9770 Physcomitrium patens HOM05D003709 ORTHO05D004364 3.2e-09 65.9 95 44.2
arahy.Tifrunner.gnm1.ann1.PZI97L Arachis hypogaea HOM05D003709 ORTHO05D004364 4.1e-09 65.5 54 66.7
Haze_09934 Corylus avellana HOM05D003709 ORTHO05D004364 7.0e-09 64.7 59 59.3
Gorai.N017600 Gossypium raimondii HOM05D003958 ORTHO05D004864 7.0e-09 64.7 40 75.0
Gorai.007G188700 Gossypium raimondii HOM05D003709 ORTHO05D004364 2.7e-08 62.8 37 78.4
Gohir.A09G000259 Gossypium hirsutum HOM05D003709 ORTHO05D004364 1.7e-07 60.1 44 65.9
Gohir.1Z049623 Gossypium hirsutum HOM05D003709 ORTHO05D004364 2.3e-07 59.7 36 77.8
Gohir.A12G001133 Gossypium hirsutum HOM05D003709 ORTHO05D004364 2.3e-07 59.7 39 69.2
Gorai.006G066600 Gossypium raimondii HOM05D003709 ORTHO05D004364 2.3e-07 59.7 50 60.0
Sabra16G0077300 Salix brachista HOM05D003709 ORTHO05D004364 2.3e-07 59.7 57 56.1
AagrBONN_evm.TU.Sc2ySwM_228.2513 Anthoceros agrestis HOM05D003709 ORTHO05D004364 3.9e-07 58.9 109 33.0
TAR636G0224 Trochodendron aralioides HOM05D003709 ORTHO05D004364 6.6e-07 58.2 87 39.1
COL.COLO4_29661 Corchorus olitorius HOM05D003709 ORTHO05D004364 8.6e-07 57.8 53 54.7
Gohir.D04G000065 Gossypium hirsutum HOM05D003709 ORTHO05D004364 1.1e-06 57.4 37 73.0
Gohir.D02G000150 Gossypium hirsutum HOM05D003709 ORTHO05D004364 1.5e-06 57.0 53 52.8
Gohir.1Z049729 Gossypium hirsutum HOM05D003709 ORTHO05D004364 2.5e-06 56.2 35 74.3
ClCG10G018670 Citrullus lanatus HOM05D003709 ORTHO05D004364 4.3e-06 55.5 27 92.6
Mapoly0009s0017 Marchantia polymorpha HOM05D003709 ORTHO05D004364 4.3e-06 55.5 94 37.2
Potri.006G208200 Populus trichocarpa HOM05D003709 ORTHO05D004364 7.3e-06 54.7 48 58.3
Gohir.A03G211700 Gossypium hirsutum HOM05D001759 ORTHO05D004364 9.5e-06 54.3 49 61.2


User provided reference genes

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