Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv21097 Davidia involucrata HOM05D007913 ORTHO05D009599 6.7e-90 334.3 173 100.0
MBI16_g11028_MAGBIO Magnolia biondii HOM05D007913 ORTHO05D009599 2.0e-09 67.0 65 50.8
TAR629G2111 Trochodendron aralioides HOM05D007913 ORTHO05D009599 2.6e-09 66.6 73 50.7
TAR371G0046 Trochodendron aralioides HOM05D007913 ORTHO05D009599 7.6e-09 65.1 73 50.7
Haze_06126 Corylus avellana HOM05D007913 ORTHO05D009599 2.2e-08 63.5 69 52.2
CSS0042752 Camellia sinensis var. sinensis HOM05D052657 ORTHO05D016853 2.9e-08 63.2 69 50.7
CSS0038924 Camellia sinensis var. sinensis HOM05D052657 ORTHO05D016853 4.9e-08 62.4 69 50.7
Cfa000684 Carpinus fangiana HOM05D008124 ORTHO05D004072 1.1e-07 61.2 77 46.8
MBI10_g16032_MAGBIO Magnolia biondii HOM05D007913 ORTHO05D009599 1.1e-07 61.2 72 52.8
Hma1.2p1_0061F.1_g034050 Hydrangea macrophylla HOM05D007913 ORTHO05D009599 1.4e-07 60.8 68 52.9
TAR374G0796 Trochodendron aralioides HOM05D007913 ORTHO05D009599 1.4e-07 60.8 73 45.2
Actinidia35084 Actinidia chinensis HOM05D006108 ORTHO05D007605 1.9e-07 60.5 82 46.3
Duzib251G0161 Durio zibethinus HOM05D013794 ORTHO05D009599 1.9e-07 60.5 63 50.8
COL.COLO4_07914 Corchorus olitorius HOM05D007913 ORTHO05D009599 4.2e-07 59.3 63 55.6
Thecc.02G356100 Theobroma cacao HOM05D013794 ORTHO05D009599 4.2e-07 59.3 52 57.7
Dinv04476 Davidia involucrata HOM05D007913 ORTHO05D009599 9.3e-07 58.2 54 53.7
Atru.chr11.1276 Acer truncatum HOM05D007913 ORTHO05D009599 2.1e-06 57.0 56 51.8
Ciclev10033073m.g Citrus clementina HOM05D007913 ORTHO05D009599 2.1e-06 57.0 74 48.6
Potri.008G119900 Populus trichocarpa HOM05D013794 ORTHO05D009599 2.1e-06 57.0 68 44.1
Sabra08G0090900 Salix brachista HOM05D013794 ORTHO05D009599 2.1e-06 57.0 66 43.9
Actinidia35085 Actinidia chinensis HOM05D010627 ORTHO05D013125 2.7e-06 56.6 56 57.1
Dinv04474 Davidia involucrata HOM05D008396 ORTHO05D000898 2.7e-06 56.6 55 50.9
Gohir.D12G171000 Gossypium hirsutum HOM05D013794 ORTHO05D009599 2.7e-06 56.6 37 73.0
Gorai.008G183600 Gossypium raimondii HOM05D013794 ORTHO05D009599 2.7e-06 56.6 37 73.0
Manes.01G012300 Manihot esculenta HOM05D021252 ORTHO05D012395 2.7e-06 56.6 65 49.2
CiPaw.16G064300 Carya illinoinensis HOM05D007913 ORTHO05D009599 3.5e-06 56.2 67 50.7
CiPaw.16G064400 Carya illinoinensis HOM05D007913 ORTHO05D009599 3.5e-06 56.2 70 44.3
Actinidia14885 Actinidia chinensis HOM05D007913 ORTHO05D009599 4.6e-06 55.8 48 60.4
Actinidia18937 Actinidia chinensis HOM05D010627 ORTHO05D009599 4.6e-06 55.8 55 58.2
Ciclev10033117m.g Citrus clementina HOM05D013794 ORTHO05D009599 6.0e-06 55.5 53 54.7
Duzib268G1152 Durio zibethinus HOM05D013794 ORTHO05D009599 6.0e-06 55.5 65 50.8
Rhsim12G0143600 Rhododendron simsii HOM05D007913 ORTHO05D009599 7.8e-06 55.1 52 57.7
Sopen05g005290 Solanum pennellii HOM05D007913 ORTHO05D009599 7.8e-06 55.1 71 46.5


User provided reference genes

Program Settings