Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv21074 Davidia involucrata HOM05D006134 ORTHO05D007671 5.8e-115 417.5 206 100.0
Manes.11G097800 Manihot esculenta HOM05D006134 ORTHO05D007671 1.7e-61 240.0 125 88.0
CSS0024749 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 3.7e-61 238.8 126 88.9
CSS0027024 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 3.7e-61 238.8 125 88.8
CANSAT80G1040 Cannabis sativa HOM05D006134 ORTHO05D007671 4.8e-61 238.4 125 88.0
CSS0037732 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 6.3e-61 238.0 125 89.6
Cpa.g.sc182.12 Carica papaya HOM05D006134 ORTHO05D007671 1.4e-60 236.9 125 88.8
Atru.chr9.1880 Acer truncatum HOM05D006134 ORTHO05D007671 1.8e-60 236.5 125 88.0
Ciclev10029589m.g Citrus clementina HOM05D006134 ORTHO05D007671 1.8e-60 236.5 125 88.0
Haze_00699 Corylus avellana HOM05D006134 ORTHO05D007671 5.3e-60 235.0 126 85.7
Lalb_Chr10g0093471 Lupinus albus HOM05D006134 ORTHO05D007671 6.9e-60 234.6 125 84.8
Lalb_Chr10g0093491 Lupinus albus HOM05D006134 ORTHO05D007671 6.9e-60 234.6 125 84.8
arahy.Tifrunner.gnm1.ann1.A6PCA1 Arachis hypogaea HOM05D006134 ORTHO05D007671 1.2e-59 233.8 126 84.9
VMungo1080G1627 Vigna mungo HOM05D006134 ORTHO05D007671 1.2e-59 233.8 126 84.1
Glyma.11G156931 Glycine max HOM05D006134 ORTHO05D007671 1.5e-59 233.4 125 84.8
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 2.0e-59 233.0 127 86.6
QL11p052022 Quercus lobata HOM05D006134 ORTHO05D007671 3.4e-59 232.3 124 84.7
QL11p052248 Quercus lobata HOM05D006134 ORTHO05D007671 3.4e-59 232.3 124 84.7
Lsat_1_v5_gn_1_25060 Lactuca sativa HOM05D006134 ORTHO05D007671 7.7e-59 231.1 124 87.1
CiPaw.10G137600 Carya illinoinensis HOM05D006134 ORTHO05D007671 1.0e-58 230.7 125 85.6
Cc02_g30030 Coffea canephora HOM05D006134 ORTHO05D007671 1.0e-58 230.7 125 85.6
arahy.Tifrunner.gnm1.ann1.PD8D7M Arachis hypogaea HOM05D006134 ORTHO05D007671 2.2e-58 229.6 125 84.8
EL10Ac9g21342 Beta vulgaris HOM05D006134 ORTHO05D007671 2.9e-58 229.2 125 85.6
MELO3C008634.2 Cucumis melo HOM05D006134 ORTHO05D007671 2.9e-58 229.2 125 84.0
AUR62021421 Chenopodium quinoa HOM05D006134 ORTHO05D007671 8.5e-58 227.6 125 84.8
Psat5g110600 Pisum sativum HOM05D006134 ORTHO05D007671 1.4e-57 226.9 125 82.4
CsaV3_2G009990 Cucumis sativus L. HOM05D006134 ORTHO05D007671 2.5e-57 226.1 125 83.2
Ca_17958_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 3.2e-57 225.7 125 83.2
SGA_v2.0_scaffold207G41895 Striga asiatica HOM05D006134 ORTHO05D007671 3.2e-57 225.7 125 85.6
Medtr3g082190 Medicago truncatula HOM05D006134 ORTHO05D007671 4.2e-57 225.3 126 81.7
Peaxi162Scf00359g00813 Petunia axillaris HOM05D006134 ORTHO05D007671 4.2e-57 225.3 125 82.4
Sed0025018 Sechium edule HOM05D006134 ORTHO05D007671 4.2e-57 225.3 125 81.6
Lj6g0003235 Lotus japonicus HOM05D006134 ORTHO05D007671 5.5e-57 224.9 125 81.6
HanXRQChr12g0383651 Helianthus annuus HOM05D006134 ORTHO05D007671 7.2e-57 224.6 125 84.0
GSVIVG01023976001 Vitis vinifera HOM05D006134 ORTHO05D007671 9.4e-57 224.2 125 84.0
Hund14365 Selenicereus undatus HOM05D006134 ORTHO05D007671 1.2e-56 223.8 125 82.4
Phvul.005G034200 Phaseolus vulgaris HOM05D006134 ORTHO05D007671 2.1e-56 223.0 125 80.0
Nitab4.5_0000101g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 4.7e-56 221.9 125 80.0
Ah.01g023220 Amaranthus hybridus HOM05D006134 ORTHO05D007671 1.4e-55 220.3 125 81.6
Oeu055649.1 Olea europaea HOM05D006134 ORTHO05D007671 1.8e-55 219.9 125 82.4
FAN04G0013 Fragaria x ananassa HOM05D006134 ORTHO05D007671 3.0e-55 219.2 125 84.0
FAN08G0898 Fragaria x ananassa HOM05D006134 ORTHO05D007671 3.0e-55 219.2 125 84.0
AUR62010905 Chenopodium quinoa HOM05D006134 ORTHO05D007671 3.9e-55 218.8 137 77.4
Dinv31631 Davidia involucrata HOM05D006134 ORTHO05D007671 3.9e-55 218.8 125 85.6
ECA247G3382 Erigeron canadensis HOM05D006134 ORTHO05D007671 6.7e-55 218.0 125 81.6
TWI79G0531 Tripterygium wilfordii HOM05D006134 ORTHO05D007671 6.7e-55 218.0 125 82.4
TAR376G1190 Trochodendron aralioides HOM05D006134 ORTHO05D007671 8.8e-55 217.6 125 82.4
FvH4_5g23580 Fragaria vesca HOM05D006134 ORTHO05D007671 1.1e-54 217.2 125 83.2
FAN18G0426 Fragaria x ananassa HOM05D006134 ORTHO05D007671 1.1e-54 217.2 125 83.2
FAN18G3769 Fragaria x ananassa HOM05D006134 ORTHO05D007671 1.1e-54 217.2 125 83.2
RcHm_v2.0_Chr7g0212881 Rosa chinensis HOM05D006134 ORTHO05D007671 1.5e-54 216.9 125 83.2
SGA_v2.0_scaffold80G25864 Striga asiatica HOM05D006134 ORTHO05D007671 2.6e-54 216.1 126 81.0
COL.COLO4_32379 Corchorus olitorius HOM05D006134 ORTHO05D007671 4.4e-54 215.3 125 81.6
Nn6g31911 Nelumbo nucifera HOM05D006134 ORTHO05D007671 4.4e-54 215.3 125 80.0
Potri.016G127200 Populus trichocarpa HOM05D006134 ORTHO05D007671 7.4e-54 214.5 125 83.2
PGSC0003DMG400020551 Solanum tuberosum HOM05D006134 ORTHO05D007671 9.7e-54 214.2 125 79.2
CAN.G181.11 Capsicum annuum HOM05D006134 ORTHO05D007671 1.3e-53 213.8 125 80.0
HanXRQChr10g0314981 Helianthus annuus HOM05D006134 ORTHO05D007671 1.3e-53 213.8 130 77.7
Solyc06g007480.3 Solanum lycopersicum HOM05D006134 ORTHO05D007671 1.3e-53 213.8 125 79.2
Thecc.02G130200 Theobroma cacao HOM05D006134 ORTHO05D007671 1.3e-53 213.8 125 80.8
MSTRG.5438 Avicennia marina HOM05D006134 ORTHO05D007671 1.7e-53 213.4 125 80.0
FAN13G0082 Fragaria x ananassa HOM05D006134 ORTHO05D007671 1.7e-53 213.4 125 81.6
Nitab4.5_0000890g0130 Nicotiana tabacum HOM05D006134 ORTHO05D007671 1.7e-53 213.4 132 76.5
Duzib052G0391 Durio zibethinus HOM05D006134 ORTHO05D007671 3.7e-53 212.2 125 81.6
unitig_52.g17376 Utricularia gibba HOM05D006134 ORTHO05D007671 3.7e-53 212.2 138 70.3
Sopen06g002390 Solanum pennellii HOM05D006134 ORTHO05D007671 4.8e-53 211.8 125 78.4
Gohir.D01G010100 Gossypium hirsutum HOM05D006134 ORTHO05D007671 8.2e-53 211.1 125 81.6
Gorai.002G012200 Gossypium raimondii HOM05D006134 ORTHO05D007671 8.2e-53 211.1 125 81.6
TAR628G0583 Trochodendron aralioides HOM05D006134 ORTHO05D007671 2.4e-52 209.5 125 80.0
SalBow3G4511 Salvia bowleyana HOM05D006134 ORTHO05D007671 3.1e-52 209.1 125 77.6
THA.LOC104807806 Tarenaya hassleriana HOM05D006134 ORTHO05D007671 3.1e-52 209.1 125 80.8
Migut.N01297 Erythranthe guttata HOM05D006134 ORTHO05D007671 5.3e-52 208.4 126 77.8
Oeu002964.1 Olea europaea HOM05D006134 ORTHO05D007671 7.0e-52 208.0 125 78.4
Gohir.A01G010500 Gossypium hirsutum HOM05D006134 ORTHO05D007671 9.1e-52 207.6 125 80.8
PGR042G1126 Punica granatum HOM05D006134 ORTHO05D007671 1.2e-51 207.2 125 76.8
CDE04G1640 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 1.6e-51 206.8 125 75.2
Aa31LG6G16690 Aethionema arabicum HOM05D006134 ORTHO05D007671 2.0e-51 206.5 125 78.4
Eucgr.F02572 Eucalyptus grandis HOM05D006134 ORTHO05D007671 3.5e-51 205.7 125 76.8
Rhsim11G0193500 Rhododendron simsii HOM05D006134 ORTHO05D007671 4.5e-51 205.3 172 63.4
vmacro02291 Vaccinium macrocarpon HOM05D006134 ORTHO05D007671 5.9e-51 204.9 205 55.6
Duzib248G0743 Durio zibethinus HOM05D006134 ORTHO05D007671 1.0e-50 204.1 150 68.7
Sc08g0002730 Simmondsia chinensis HOM05D006134 ORTHO05D007671 1.3e-50 203.8 125 79.2
Sp7g37280 Schrenkiella parvula HOM05D006134 ORTHO05D007671 1.7e-50 203.4 125 78.4
ClCG11G010360 Citrullus lanatus HOM05D006134 ORTHO05D007671 2.9e-50 202.6 108 83.3
MD12G1003500 Malus domestica HOM05D006134 ORTHO05D007671 1.5e-49 200.3 103 90.3
Aqoxy5G01105 Aquilegia oxysepala HOM05D006134 ORTHO05D007671 3.2e-49 199.1 125 76.0
CDE02G2427 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 3.2e-49 199.1 125 72.0
Thhalv10026572m.g Eutrema salsugineum HOM05D006134 ORTHO05D007671 3.2e-49 199.1 125 76.0
Prupe.7G004000 Prunus persica HOM05D006134 ORTHO05D007671 1.4e-47 193.7 125 74.4
PSO210G5022 Papaver somniferum HOM05D006134 ORTHO05D007671 6.7e-47 191.4 125 72.0
ATR0730G227 Amborella trichopoda HOM05D006134 ORTHO05D007671 1.2e-46 190.7 125 68.8
Mapoly0028s0104 Marchantia polymorpha HOM05D006134 ORTHO05D007671 1.5e-46 190.3 122 68.9
AUR62013003 Chenopodium quinoa HOM05D006134 ORTHO05D007671 3.3e-46 189.1 103 84.5
PSO170G0646 Papaver somniferum HOM05D006134 ORTHO05D007671 4.4e-46 188.7 125 71.2
HanXRQChr07g0198481 Helianthus annuus HOM05D006134 ORTHO05D007671 7.5e-46 188.0 125 72.8
AUR62015152 Chenopodium quinoa HOM05D006134 ORTHO05D007671 2.8e-45 186.0 103 81.6
SMO367G0732 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 6.3e-45 184.9 124 70.2
AUR62010013 Chenopodium quinoa HOM05D006134 ORTHO05D007671 2.4e-44 183.0 103 81.6
AT4G38495 Arabidopsis thaliana HOM05D006134 ORTHO05D007671 1.6e-43 180.3 125 68.8
Carub.0007s0038 Capsella rubella HOM05D006134 ORTHO05D007671 3.5e-43 179.1 125 70.4
Pp3c14_10610 Physcomitrium patens HOM05D006134 ORTHO05D007671 4.5e-43 178.7 122 66.4
Pp3c14_10611 Physcomitrium patens HOM05D006134 ORTHO05D007671 4.5e-43 178.7 122 66.4
Sed0020335 Sechium edule HOM05D006134 ORTHO05D007671 4.5e-43 178.7 125 67.2
AL7G10360 Arabidopsis lyrata HOM05D006134 ORTHO05D007671 5.0e-42 175.3 120 70.0
A01p00050 Brassica napus HOM05D006134 ORTHO05D007671 1.5e-41 173.7 125 68.8
BcaNung01304 Brassica carinata HOM05D006134 ORTHO05D007671 1.9e-41 173.3 125 68.0
C01p00090 Brassica napus HOM05D006134 ORTHO05D007671 1.9e-41 173.3 125 68.0
Os04g0274400 Oryza sativa ssp. japonica HOM05D006134 ORTHO05D007671 3.6e-40 169.1 125 63.2
BcaNung04221 Brassica carinata HOM05D006134 ORTHO05D007671 3.0e-39 166.0 127 66.9
CBR_g12196 Chara braunii HOM05D006134 ORTHO05D007671 3.1e-36 156.0 119 63.0
Zm00001eb420290 Zea mays HOM05D006134 ORTHO05D007671 1.6e-32 143.7 113 56.6
Sabra16G0121200 Salix brachista HOM05D006134 ORTHO05D007671 2.8e-32 142.9 81 82.7
Sabra16G0122100 Salix brachista HOM05D006134 ORTHO05D007671 2.8e-32 142.9 81 82.7
Prupe.4G038000 Prunus persica HOM05D006134 ORTHO05D007671 1.6e-27 127.1 108 62.0
BraA01t00010Z Brassica rapa HOM05D006134 ORTHO05D007671 2.8e-24 116.3 81 69.1
BolC1t00014H Brassica oleracea HOM05D006134 ORTHO05D007671 4.7e-24 115.5 81 67.9
A07p02890 Brassica napus HOM05D006134 ORTHO05D007671 3.4e-22 109.4 78 67.9
BraA07t28089Z Brassica rapa HOM05D006134 ORTHO05D007671 3.4e-22 109.4 78 67.9
Ca_02756_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 4.1e-20 102.4 58 77.6
Ca_02758_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 4.1e-20 102.4 58 77.6
Ca_02994_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 2.0e-19 100.1 53 83.0
Nitab4.5_0000165g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 2.0e-19 100.1 69 71.0
SEGI_00696 Sequoiadendron giganteum HOM05D006134 ORTHO05D007671 2.7e-19 99.8 66 68.2
SHI24498 Sapria himalayana HOM05D006134 ORTHO05D007671 9.5e-17 91.3 59 67.8
CARHR294230 Cardamine hirsuta HOM05D006134 ORTHO05D007671 1.8e-15 87.0 79 57.0
Sabra16G0121700 Salix brachista HOM05D006134 ORTHO05D007671 4.9e-13 79.0 45 82.2
TPR.G34385 Trifolium pratense HOM05D006134 ORTHO05D007671 3.5e-11 72.8 44 77.3
EL10Ac8g18393 Beta vulgaris HOM05D006134 ORTHO05D007671 5.0e-10 68.9 48 72.9
SMO230G0118 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 4.0e-07 59.3 40 67.5


User provided reference genes

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