Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20995 Davidia involucrata HOM05D036270 ORTHO05D020554 9.2e-167 590.1 292 100.0
Dinv20948 Davidia involucrata HOM05D036270 ORTHO05D020554 1.1e-135 486.9 243 99.6
Dinv26700 Davidia involucrata HOM05D000943 ORTHO05D006658 5.5e-18 95.9 108 55.6
Eucgr.E01366 Eucalyptus grandis HOM05D017687 ORTHO05D020554 9.3e-18 95.1 86 54.7
Dinv13353 Davidia involucrata HOM05D000590 ORTHO05D006658 1.1e-13 81.6 99 53.5
Dinv00731 Davidia involucrata HOM05D013161 ORTHO05D011747 2.9e-11 73.6 50 74.0
TWI39G0773 Tripterygium wilfordii HOM05D000590 ORTHO05D006658 5.0e-11 72.8 120 42.5
Dinv07947 Davidia involucrata HOM05D036270 ORTHO05D183221 8.5e-11 72.0 49 73.5
Potri.001G382500 Populus trichocarpa HOM05D000590 ORTHO05D006658 1.1e-10 71.6 91 44.0
Rhsim06G0212500 Rhododendron simsii HOM05D001914 ORTHO05D001983 1.1e-10 71.6 90 46.7
RcHm_v2.0_Chr5g0029281 Rosa chinensis HOM05D000590 ORTHO05D006658 2.7e-09 67.0 193 32.1
CSS0046178 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006658 3.6e-09 66.6 46 60.9
Sabra16G0251900 Salix brachista HOM05D000590 ORTHO05D006658 4.6e-09 66.2 67 47.8
TAR627G0624 Trochodendron aralioides HOM05D000590 ORTHO05D006658 4.6e-09 66.2 108 40.7
Dinv37586 Davidia involucrata HOM05D000501 ORTHO05D000376 1.0e-08 65.1 37 94.6
Cpa.g.sc1162.1 Carica papaya HOM05D000590 ORTHO05D006658 1.8e-08 64.3 177 32.2
Manes.03G078000 Manihot esculenta HOM05D000590 ORTHO05D006658 1.8e-08 64.3 46 69.6
Dinv38892 Davidia involucrata HOM05D000501 ORTHO05D000376 3.0e-08 63.5 42 78.6
ECA236G0454 Erigeron canadensis HOM05D000590 ORTHO05D006658 3.9e-08 63.2 111 38.7
Lsat_1_v5_gn_7_100300 Lactuca sativa HOM05D000590 ORTHO05D006658 5.1e-08 62.8 97 38.1
Sp3g12970 Schrenkiella parvula HOM05D000590 ORTHO05D006658 5.1e-08 62.8 141 36.9
THA.LOC104815580 Tarenaya hassleriana HOM05D000590 ORTHO05D006658 5.1e-08 62.8 63 54.0
FvH4_3g17570 Fragaria vesca HOM05D000590 ORTHO05D006658 8.7e-08 62.0 194 32.5
FAN16G1913 Fragaria x ananassa HOM05D000590 ORTHO05D006658 8.7e-08 62.0 194 32.5
THA.LOC104822584 Tarenaya hassleriana HOM05D000590 ORTHO05D006658 8.7e-08 62.0 37 75.7
Potri.011G103100 Populus trichocarpa HOM05D000590 ORTHO05D006658 1.1e-07 61.6 101 38.6
CARHR089680 Cardamine hirsuta HOM05D000590 ORTHO05D006658 1.5e-07 61.2 133 36.8
AL3G27050 Arabidopsis lyrata HOM05D000590 ORTHO05D006658 1.9e-07 60.8 39 64.1
BraA05t22287Z Brassica rapa HOM05D000590 ORTHO05D006658 1.9e-07 60.8 149 33.6
Thhalv10021064m.g Eutrema salsugineum HOM05D000590 ORTHO05D006658 2.5e-07 60.5 46 54.3
Hma1.2p1_0216F.1_g091160 Hydrangea macrophylla HOM05D000501 ORTHO05D000376 2.5e-07 60.5 50 68.0
AT3G14740 Arabidopsis thaliana HOM05D000590 ORTHO05D006658 3.3e-07 60.1 113 38.9
FAN25G1530 Fragaria x ananassa HOM05D000590 ORTHO05D006658 3.3e-07 60.1 194 32.5
MD03G1251300 Malus domestica HOM05D000590 ORTHO05D006658 3.3e-07 60.1 74 48.6
Sabra11G0077600 Salix brachista HOM05D000590 ORTHO05D006658 4.3e-07 59.7 138 33.3
Actinidia12609 Actinidia chinensis HOM05D000590 ORTHO05D006658 5.7e-07 59.3 146 32.9
A05p34710 Brassica napus HOM05D000590 ORTHO05D006658 5.7e-07 59.3 173 31.8
Sabra11G0082500 Salix brachista HOM05D000590 ORTHO05D006658 5.7e-07 59.3 50 58.0
Haze_08447 Corylus avellana HOM05D000590 ORTHO05D006658 9.7e-07 58.5 62 51.6
CiPaw.12G109900 Carya illinoinensis HOM05D000590 ORTHO05D006658 1.3e-06 58.2 51 60.8
COL.COLO4_17463 Corchorus olitorius HOM05D000590 ORTHO05D006658 1.3e-06 58.2 127 33.1
TWI38G1174 Tripterygium wilfordii HOM05D000590 ORTHO05D006658 1.3e-06 58.2 40 70.0
Duzib213G0379 Durio zibethinus HOM05D000590 ORTHO05D006658 1.6e-06 57.8 106 34.9
Gohir.A04G045500 Gossypium hirsutum HOM05D000590 ORTHO05D006658 1.6e-06 57.8 81 40.7
C05p52510 Brassica napus HOM05D000590 ORTHO05D006658 2.8e-06 57.0 37 62.2
HanXRQChr11g0330421 Helianthus annuus HOM05D000590 ORTHO05D006658 2.8e-06 57.0 69 43.5
Nn6g34385 Nelumbo nucifera HOM05D000590 ORTHO05D006658 2.8e-06 57.0 59 54.2
FAN21G3792 Fragaria x ananassa HOM05D000590 ORTHO05D006658 3.7e-06 56.6 195 31.3
Prupe.4G155300 Prunus persica HOM05D000590 ORTHO05D006658 3.7e-06 56.6 78 44.9
Aa31LG8G1960 Aethionema arabicum HOM05D000590 ORTHO05D006658 4.8e-06 56.2 73 45.2
FAN11G1469 Fragaria x ananassa HOM05D000590 ORTHO05D006658 4.8e-06 56.2 196 31.6
BcaB06g25360 Brassica carinata HOM05D000590 ORTHO05D006658 6.3e-06 55.8 31 74.2
Carub.0003s1441 Capsella rubella HOM05D000590 ORTHO05D006658 6.3e-06 55.8 181 32.0
vmacro11414 Vaccinium macrocarpon HOM05D000501 ORTHO05D000376 6.3e-06 55.8 42 71.4
CiPaw.11G155300 Carya illinoinensis HOM05D000590 ORTHO05D006658 8.2e-06 55.5 60 51.7


User provided reference genes

Program Settings