Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20956 Davidia involucrata HOM05D003476 ORTHO05D004057 1.1e-70 270.0 146 100.0
Dinv20987 Davidia involucrata HOM05D003476 ORTHO05D004057 1.1e-70 270.0 146 100.0
Dinv34422 Davidia involucrata HOM05D002885 ORTHO05D003350 1.8e-57 226.1 132 85.6
CSS0000698 Camellia sinensis var. sinensis HOM05D003476 ORTHO05D004057 9.6e-56 220.3 182 64.8
Actinidia00934 Actinidia chinensis HOM05D003476 ORTHO05D004057 1.4e-54 216.5 178 65.7
Hma1.2p1_2137F.1_g314920 Hydrangea macrophylla HOM05D003476 ORTHO05D004057 6.9e-54 214.2 182 64.3
CANSAT56G1382 Cannabis sativa HOM05D003476 ORTHO05D004057 3.8e-52 208.4 182 61.5
CiPaw.02G189900 Carya illinoinensis HOM05D003476 ORTHO05D004057 3.8e-52 208.4 184 60.3
Glyma.14G061900 Glycine max HOM05D003476 ORTHO05D004057 1.4e-51 206.5 184 61.4
Sabra10G0148300 Salix brachista HOM05D003476 ORTHO05D004057 2.4e-51 205.7 150 70.7
Phvul.008G226300 Phaseolus vulgaris HOM05D003476 ORTHO05D004057 5.5e-51 204.5 184 60.3
Glyma.02G254500 Glycine max HOM05D003476 ORTHO05D004057 9.3e-51 203.8 184 60.3
TWI73G1048 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 1.2e-50 203.4 184 59.8
TWI73G1058 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 1.6e-50 203.0 184 59.8
Thecc.10G026100 Theobroma cacao HOM05D003476 ORTHO05D004057 2.1e-50 202.6 182 61.0
TWI09G0086 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 2.7e-50 202.2 184 60.3
TWI23G0971 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 2.7e-50 202.2 184 60.3
Migut.F01426 Erythranthe guttata HOM05D003476 ORTHO05D004057 3.5e-50 201.8 190 58.9
GSVIVG01016365001 Vitis vinifera HOM05D003476 ORTHO05D004057 3.5e-50 201.8 189 58.2
Manes.10G017601 Manihot esculenta HOM05D003476 ORTHO05D004057 4.6e-50 201.4 184 59.8
Gohir.A10G229700 Gossypium hirsutum HOM05D003476 ORTHO05D004057 7.9e-50 200.7 183 60.1
TAR636G1152 Trochodendron aralioides HOM05D003476 ORTHO05D004057 7.9e-50 200.7 182 60.4
CsaV3_5G008920 Cucumis sativus L. HOM05D003476 ORTHO05D004057 1.3e-49 199.9 153 66.0
Gorai.011G280300 Gossypium raimondii HOM05D003476 ORTHO05D004057 1.3e-49 199.9 177 61.6
TWI53G1335 Tripterygium wilfordii HOM05D003476 ORTHO05D004057 1.3e-49 199.9 184 59.2
Nn2g13624 Nelumbo nucifera HOM05D003476 ORTHO05D004057 1.8e-49 199.5 182 60.4
PGSC0003DMG400025078 Solanum tuberosum HOM05D003476 ORTHO05D004057 1.8e-49 199.5 182 59.9
TPR.G8041 Trifolium pratense HOM05D003476 ORTHO05D004057 2.3e-49 199.1 184 58.2
Eucgr.G03033 Eucalyptus grandis HOM05D003476 ORTHO05D004057 5.1e-49 198.0 184 59.2
Potri.010G192700 Populus trichocarpa HOM05D003476 ORTHO05D004057 5.1e-49 198.0 184 60.3
Solyc04g072032.1 Solanum lycopersicum HOM05D003476 ORTHO05D004057 6.7e-49 197.6 182 59.3
ClCG07G004000 Citrullus lanatus HOM05D003476 ORTHO05D004057 8.7e-49 197.2 188 55.9
Nitab4.5_0000099g0220 Nicotiana tabacum HOM05D003476 ORTHO05D004057 8.7e-49 197.2 171 62.6
DCAR_011789 Daucus carota HOM05D003476 ORTHO05D004057 1.1e-48 196.8 179 59.8
Potri.008G064700 Populus trichocarpa HOM05D003476 ORTHO05D004057 1.1e-48 196.8 184 58.2
Duzib114G0190 Durio zibethinus HOM05D003476 ORTHO05D004057 1.9e-48 196.1 148 68.2
Hma1.2p1_0710F.1_g207290 Hydrangea macrophylla HOM05D003476 ORTHO05D004057 2.5e-48 195.7 184 59.2
LjContig00357g0022102 Lotus japonicus HOM05D003476 ORTHO05D004057 2.5e-48 195.7 184 58.2
PGR142G4151 Punica granatum HOM05D003476 ORTHO05D004057 2.5e-48 195.7 184 58.2
Sed0009203 Sechium edule HOM05D003476 ORTHO05D004057 3.3e-48 195.3 199 53.8
CAN.G1252.7 Capsicum annuum HOM05D003476 ORTHO05D004057 4.3e-48 194.9 171 61.4
CDE04G3620 Ceratophyllum demersum HOM05D003476 ORTHO05D004057 4.3e-48 194.9 164 61.0
Ciclev10032786m.g Citrus clementina HOM05D003476 ORTHO05D004057 4.3e-48 194.9 188 56.4
EL10Ac2g04131 Beta vulgaris HOM05D003476 ORTHO05D004057 5.6e-48 194.5 182 56.0
Psat2g035640 Pisum sativum HOM05D003476 ORTHO05D004057 5.6e-48 194.5 139 71.9
vmacro10062 Vaccinium macrocarpon HOM05D003476 ORTHO05D004057 5.6e-48 194.5 195 55.9
FvH4_7g24030 Fragaria vesca HOM05D003476 ORTHO05D004057 7.4e-48 194.1 182 57.7
FAN01G1497 Fragaria x ananassa HOM05D003476 ORTHO05D004057 7.4e-48 194.1 182 57.7
HanXRQChr12g0370541 Helianthus annuus HOM05D003476 ORTHO05D004057 1.3e-47 193.4 186 57.0
Aqoxy2G00973 Aquilegia oxysepala HOM05D003476 ORTHO05D004057 1.6e-47 193.0 149 69.1
Duzib128G2055 Durio zibethinus HOM05D003476 ORTHO05D004057 1.6e-47 193.0 183 58.5
ECA238G4332 Erigeron canadensis HOM05D003476 ORTHO05D004057 2.8e-47 192.2 183 56.3
Gohir.D10G243900 Gossypium hirsutum HOM05D003476 ORTHO05D004057 2.8e-47 192.2 184 58.7
CiPaw.01G295800 Carya illinoinensis HOM05D003476 ORTHO05D004057 3.7e-47 191.8 184 57.1
Ah.10g035550 Amaranthus hybridus HOM05D003476 ORTHO05D004057 4.8e-47 191.4 151 64.2
Manes.07G125600 Manihot esculenta HOM05D003476 ORTHO05D004057 4.8e-47 191.4 184 57.1
A03p22400 Brassica napus HOM05D003476 ORTHO05D004057 6.2e-47 191.0 182 57.1
ECA233G2895 Erigeron canadensis HOM05D003476 ORTHO05D004057 6.2e-47 191.0 149 69.1
Nn5g27487 Nelumbo nucifera HOM05D003476 ORTHO05D004057 8.2e-47 190.7 179 59.8
Sed0008497 Sechium edule HOM05D003476 ORTHO05D004057 8.2e-47 190.7 195 53.8
arahy.Tifrunner.gnm1.ann1.7TWC5I Arachis hypogaea HOM05D003476 ORTHO05D004057 1.4e-46 189.9 179 57.0
MD15G1038100 Malus domestica HOM05D003476 ORTHO05D004057 1.4e-46 189.9 188 55.3
RcHm_v2.0_Chr6g0299621 Rosa chinensis HOM05D003476 ORTHO05D004057 1.4e-46 189.9 180 59.4
THA.LOC104824307 Tarenaya hassleriana HOM05D003476 ORTHO05D004057 1.8e-46 189.5 184 55.4
arahy.Tifrunner.gnm1.ann1.C86U5P Arachis hypogaea HOM05D003476 ORTHO05D004057 2.4e-46 189.1 181 56.4
AUR62031591 Chenopodium quinoa HOM05D003476 ORTHO05D004057 2.4e-46 189.1 151 61.6
Prupe.1G392100 Prunus persica HOM05D003476 ORTHO05D004057 3.1e-46 188.7 197 53.8
AL4G37540 Arabidopsis lyrata HOM05D003476 ORTHO05D004057 4.0e-46 188.3 183 55.7
Carub.0004s2209 Capsella rubella HOM05D003476 ORTHO05D004057 4.0e-46 188.3 182 56.0
Ca_05932_v3 Cicer arietinum L. HOM05D003476 ORTHO05D004057 4.0e-46 188.3 184 56.5
COL.COLO4_25658 Corchorus olitorius HOM05D003476 ORTHO05D004057 4.0e-46 188.3 172 58.7
Haze_17184 Corylus avellana HOM05D003476 ORTHO05D004057 4.0e-46 188.3 173 57.8
Sabra08G0047500 Salix brachista HOM05D003476 ORTHO05D004057 4.0e-46 188.3 173 58.4
THA.LOC104810073 Tarenaya hassleriana HOM05D003476 ORTHO05D004057 1.2e-45 186.8 184 53.8
AT2G39960 Arabidopsis thaliana HOM05D003476 ORTHO05D004057 1.5e-45 186.4 182 55.5
BcaC01g05451 Brassica carinata HOM05D003476 ORTHO05D004057 2.0e-45 186.0 195 53.3
C04p67700 Brassica napus HOM05D003476 ORTHO05D004057 2.0e-45 186.0 167 59.3
C04p07540 Brassica napus HOM05D003476 ORTHO05D004057 2.6e-45 185.7 166 59.0
BolC4t22371H Brassica oleracea HOM05D003476 ORTHO05D004057 2.6e-45 185.7 166 59.0
LjContig00357g0025168 Lotus japonicus HOM05D003476 ORTHO05D004057 3.4e-45 185.3 184 57.6
MBI16_g26377_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D004057 3.4e-45 185.3 190 52.6
VMungo0647G2503 Vigna mungo HOM05D003476 ORTHO05D004057 3.4e-45 185.3 195 53.3
MSTRG.8311 Avicennia marina HOM05D003476 ORTHO05D004057 4.5e-45 184.9 184 53.3
BcaB01g03582 Brassica carinata HOM05D003476 ORTHO05D004057 4.5e-45 184.9 184 54.9
Gohir.A13G016600 Gossypium hirsutum HOM05D003476 ORTHO05D004057 4.5e-45 184.9 184 56.0
Sp4g22270 Schrenkiella parvula HOM05D003476 ORTHO05D004057 7.6e-45 184.1 182 55.5
C03p26520 Brassica napus HOM05D003476 ORTHO05D004057 1.0e-44 183.7 197 52.3
Nitab4.5_0003770g0040 Nicotiana tabacum HOM05D003476 ORTHO05D004057 1.0e-44 183.7 223 49.3
Gorai.013G019600 Gossypium raimondii HOM05D003476 ORTHO05D004057 2.2e-44 182.6 182 56.0
BraA05t19614Z Brassica rapa HOM05D003476 ORTHO05D004057 2.9e-44 182.2 189 53.4
Sc09g0010500 Simmondsia chinensis HOM05D003476 ORTHO05D004057 2.9e-44 182.2 107 81.3
Gohir.D13G017700 Gossypium hirsutum HOM05D003476 ORTHO05D004057 3.8e-44 181.8 184 55.4
TAR633G1753 Trochodendron aralioides HOM05D003476 ORTHO05D004057 8.4e-44 180.6 107 83.2
BraA03t11468Z Brassica rapa HOM05D003476 ORTHO05D004057 1.1e-43 180.3 186 54.3
Cc02_g06910 Coffea canephora HOM05D003476 ORTHO05D004057 1.1e-43 180.3 107 81.3
Aa31LG5G19650 Aethionema arabicum HOM05D003476 ORTHO05D004057 1.9e-43 179.5 151 61.6
A05p06460 Brassica napus HOM05D003476 ORTHO05D004057 1.9e-43 179.5 198 51.0
Medtr5g081900 Medicago truncatula HOM05D003476 ORTHO05D004057 4.2e-43 178.3 189 53.4
BcaB06g29118 Brassica carinata HOM05D003476 ORTHO05D004057 5.5e-43 177.9 187 52.9
SalBow6G0374 Salvia bowleyana HOM05D003476 ORTHO05D004057 7.1e-43 177.6 125 69.6
A04p30180 Brassica napus HOM05D003476 ORTHO05D004057 9.3e-43 177.2 185 53.0
PSO801G0598 Papaver somniferum HOM05D003476 ORTHO05D004057 9.3e-43 177.2 197 52.3
HPP92_016193 Vanilla planifolia HOM05D003476 ORTHO05D004057 9.3e-43 177.2 177 54.8
RcHm_v2.0_Chr1g0369411 Rosa chinensis HOM05D003476 ORTHO05D004057 1.2e-42 176.8 108 79.6
HanXRQChr08g0222271 Helianthus annuus HOM05D003476 ORTHO05D004057 1.6e-42 176.4 109 80.7
Aqoxy4G02660 Aquilegia oxysepala HOM05D003476 ORTHO05D004057 2.7e-42 175.6 180 55.0
BcaC02g07386 Brassica carinata HOM05D003476 ORTHO05D004057 2.7e-42 175.6 188 52.1
BolC4t28272H Brassica oleracea HOM05D003476 ORTHO05D004057 2.7e-42 175.6 188 52.1
Rhsim13G0104300 Rhododendron simsii HOM05D003476 ORTHO05D004057 3.5e-42 175.3 224 47.8
Thhalv10017265m.g Eutrema salsugineum HOM05D003476 ORTHO05D004057 4.6e-42 174.9 188 53.7
PSO339G6737 Papaver somniferum HOM05D003476 ORTHO05D004057 6.0e-42 174.5 197 51.8
Os04g0446300 Oryza sativa ssp. japonica HOM05D003476 ORTHO05D004057 1.0e-41 173.7 180 50.6
Zm00001eb081650 Zea mays HOM05D003476 ORTHO05D004057 1.3e-41 173.3 184 51.6
SEGI_14870 Sequoiadendron giganteum HOM05D003476 ORTHO05D004057 2.3e-41 172.6 180 51.7
MD08G1058200 Malus domestica HOM05D003476 ORTHO05D004057 3.9e-41 171.8 110 76.4
FvH4_2g40940 Fragaria vesca HOM05D003476 ORTHO05D004057 1.9e-40 169.5 167 55.1
Duzib106G0197 Durio zibethinus HOM05D003476 ORTHO05D004057 2.5e-40 169.1 190 50.5
Ah.16g104950 Amaranthus hybridus HOM05D003476 ORTHO05D004057 3.3e-40 168.7 151 59.6
AT4G04200 Arabidopsis thaliana HOM05D003476 ORTHO05D004057 1.3e-39 166.8 183 51.9
CARHR134880 Cardamine hirsuta HOM05D003476 ORTHO05D004057 1.3e-39 166.8 116 69.8
Thhalv10028970m.g Eutrema salsugineum HOM05D003476 ORTHO05D004057 2.8e-39 165.6 191 48.7
FAN27G3190 Fragaria x ananassa HOM05D003476 ORTHO05D004057 2.8e-39 165.6 108 74.1
SpUn0110_0020 Schrenkiella parvula HOM05D003476 ORTHO05D004057 2.8e-39 165.6 178 51.1
Os02g0565200 Oryza sativa ssp. japonica HOM05D003476 ORTHO05D004057 3.7e-39 165.2 175 50.9
Sp6g04580 Schrenkiella parvula HOM05D003476 ORTHO05D004057 6.3e-39 164.5 181 50.3
FAN03G0251 Fragaria x ananassa HOM05D003476 ORTHO05D004057 8.2e-39 164.1 206 48.1
AL6G47820 Arabidopsis lyrata HOM05D003476 ORTHO05D004057 1.1e-38 163.7 200 48.5
Aa31LG9G9900 Aethionema arabicum HOM05D002056 ORTHO05D002289 1.8e-38 162.9 132 66.7
BraA04t18491Z Brassica rapa HOM05D003476 ORTHO05D004057 2.4e-38 162.5 207 46.9
AUR62012465 Chenopodium quinoa HOM05D003476 ORTHO05D004057 5.3e-38 161.4 134 60.4
CARHR253310 Cardamine hirsuta HOM05D003476 ORTHO05D004057 2.6e-37 159.1 123 63.4
MD07G1214300 Malus domestica HOM05D003476 ORTHO05D004057 2.6e-37 159.1 115 69.6
Carub.0006s3211 Capsella rubella HOM05D003476 ORTHO05D004057 5.0e-36 154.8 124 63.7
Cfa001366 Carpinus fangiana HOM05D003476 ORTHO05D004057 1.0e-33 147.1 160 54.4
MBI14_g25462_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D004057 1.0e-33 147.1 185 45.4
Peaxi162Scf00360g00616 Petunia axillaris HOM05D003476 ORTHO05D004057 1.0e-33 147.1 98 76.5
MELO3C025156.2 Cucumis melo HOM05D003476 ORTHO05D004057 6.7e-33 144.4 165 49.7
Lj1A950T60 Lonicera japonica HOM05D003476 ORTHO05D004057 5.7e-32 141.4 80 83.8
SGA_v2.0_scaffold76G25080 Striga asiatica HOM05D003476 ORTHO05D004057 5.7e-32 141.4 79 84.8
unitig_747.g21420 Utricularia gibba HOM05D003476 ORTHO05D004057 9.7e-32 140.6 190 44.2
Mapoly0043s0045 Marchantia polymorpha HOM05D003476 ORTHO05D004057 8.2e-31 137.5 181 41.4
MBI14_g36886_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D004057 3.1e-30 135.6 161 46.0
SalBow6G0036 Salvia bowleyana HOM05D003476 ORTHO05D004057 9.1e-30 134.0 79 78.5
MBI14_g13584_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D004057 5.9e-29 131.3 80 75.0
AagrBONN_evm.TU.Sc2ySwM_228.5499 Anthoceros agrestis HOM05D003476 ORTHO05D004057 7.7e-29 131.0 93 66.7
vmacro06994 Vaccinium macrocarpon HOM05D003476 ORTHO05D004057 1.9e-27 126.3 206 40.8
CBR_g48322 Chara braunii HOM05D003476 ORTHO05D004057 3.6e-26 122.1 132 48.5
MBI16_g37731_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D004057 1.8e-25 119.8 75 73.3
TAR636G3666 Trochodendron aralioides HOM05D003476 ORTHO05D004057 2.6e-24 115.9 131 52.7
CDE03G0334 Ceratophyllum demersum HOM05D003476 ORTHO05D004057 2.8e-23 112.5 132 47.7
MBI14_g30458_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D000010 9.1e-22 107.5 115 56.5
ATR0618G195 Amborella trichopoda HOM05D003476 ORTHO05D004057 2.0e-21 106.3 67 71.6
Prupe.2G246200 Prunus persica HOM05D003476 ORTHO05D004057 5.9e-21 104.8 61 80.3
Oeu036632.1 Olea europaea HOM05D003476 ORTHO05D004057 1.0e-20 104.0 61 80.3
Solyc04g072110.4 Solanum lycopersicum HOM05D003476 ORTHO05D004057 2.2e-20 102.8 61 77.0
MBI08_g04934_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D004057 6.7e-17 91.3 68 61.8
Atru.chr12.241 Acer truncatum HOM05D003476 ORTHO05D004057 1.7e-12 76.6 134 40.3
MD01G1147400 Malus domestica HOM05D003476 ORTHO05D004057 2.2e-12 76.3 127 39.4
Aqoxy214s003 Aquilegia oxysepala HOM05D003476 ORTHO05D004057 1.9e-11 73.2 80 52.5
Zm00001eb420270 Zea mays HOM05D000224 ORTHO05D002390 1.9e-11 73.2 48 68.8
Hund03462 Selenicereus undatus HOM05D003476 ORTHO05D004057 4.2e-11 72.0 56 64.3
MBI14_g33799_MAGBIO Magnolia biondii HOM05D003476 ORTHO05D004057 1.8e-09 66.6 68 52.9
Sc06g0000400 Simmondsia chinensis HOM05D003476 ORTHO05D004057 2.0e-08 63.2 102 40.2
Lsat_1_v5_gn_5_2880 Lactuca sativa HOM05D003476 ORTHO05D004057 5.7e-08 61.6 112 36.6
Rhsim03G0140200 Rhododendron simsii HOM05D003476 ORTHO05D004057 1.1e-06 57.4 133 33.1
Lalb_Chr20g0116611 Lupinus albus HOM05D003476 ORTHO05D004057 5.3e-06 55.1 32 78.1


User provided reference genes

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