Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20794 Davidia involucrata HOM05D004367 ORTHO05D004937 3.2e-65 251.5 121 100.0
Dinv04310 Davidia involucrata HOM05D004367 ORTHO05D004937 1.6e-19 99.8 91 60.4
Dinv20169 Davidia involucrata HOM05D000397 ORTHO05D004937 3.0e-18 95.5 84 60.7
Hma1.2p1_0480F.1_g161800 Hydrangea macrophylla HOM05D004367 ORTHO05D004937 5.6e-17 91.3 92 54.3
Hma1.2p1_2210F.1_g317160 Hydrangea macrophylla HOM05D004367 ORTHO05D004937 5.6e-17 91.3 92 54.3
PGSC0003DMG400025036 Solanum tuberosum HOM05D004367 ORTHO05D004937 5.6e-17 91.3 91 50.5
Lj1A844G36 Lonicera japonica HOM05D004367 ORTHO05D004937 9.5e-17 90.5 91 52.7
Nitab4.5_0002383g0110 Nicotiana tabacum HOM05D004367 ORTHO05D004937 9.5e-17 90.5 92 54.3
CSS0040505 Camellia sinensis var. sinensis HOM05D004367 ORTHO05D004937 2.1e-16 89.4 89 55.1
Solyc10g006990.3 Solanum lycopersicum HOM05D004367 ORTHO05D004937 4.7e-16 88.2 91 48.4
Sopen10g002900 Solanum pennellii HOM05D004367 ORTHO05D004937 4.7e-16 88.2 91 48.4
Nitab4.5_0000207g0150 Nicotiana tabacum HOM05D004367 ORTHO05D004937 1.1e-15 87.0 92 51.1
Actinidia12812 Actinidia chinensis HOM05D004367 ORTHO05D004937 2.3e-15 85.9 91 52.7
Oeu005412.1 Olea europaea HOM05D004367 ORTHO05D004937 3.7e-13 78.6 95 49.5
Lsat_1_v5_gn_5_127821 Lactuca sativa HOM05D004367 ORTHO05D004937 6.4e-13 77.8 110 40.9
HanXRQChr12g0361521 Helianthus annuus HOM05D004367 ORTHO05D004937 8.3e-13 77.4 91 44.0
Dinv33726 Davidia involucrata HOM05D052718 ORTHO05D004937 3.2e-12 75.5 60 68.3
MSTRG.15226 Avicennia marina HOM05D004367 ORTHO05D004937 9.2e-12 73.9 94 46.8
Rhsim06G0197900 Rhododendron simsii HOM05D004367 ORTHO05D004937 1.2e-11 73.6 87 47.1
Migut.M00812 Erythranthe guttata HOM05D004367 ORTHO05D004937 2.7e-11 72.4 88 43.2
SalBow8G3529 Salvia bowleyana HOM05D004367 ORTHO05D004937 3.5e-11 72.0 76 55.3
TAR624G0790 Trochodendron aralioides HOM05D004367 ORTHO05D004937 3.5e-11 72.0 74 52.7
GSVIVG01014349001 Vitis vinifera HOM05D004367 ORTHO05D004937 1.0e-10 70.5 86 46.5
DCAR_017144 Daucus carota HOM05D004367 ORTHO05D004937 2.3e-10 69.3 77 48.1
Dinv16898 Davidia involucrata HOM05D052718 ORTHO05D004937 2.3e-10 69.3 60 65.0
Hund22921 Selenicereus undatus HOM05D004367 ORTHO05D004937 2.3e-10 69.3 93 43.0
Lj3g0015758 Lotus japonicus HOM05D004367 ORTHO05D004937 3.9e-10 68.6 91 41.8
Sc16g0006960 Simmondsia chinensis HOM05D004367 ORTHO05D004937 3.9e-10 68.6 85 43.5
vmacro18312 Vaccinium macrocarpon HOM05D004367 ORTHO05D004937 3.9e-10 68.6 87 43.7
AUR62029381 Chenopodium quinoa HOM05D004367 ORTHO05D004937 6.6e-10 67.8 94 46.8
Ca_01836_v3 Cicer arietinum L. HOM05D004367 ORTHO05D004937 6.6e-10 67.8 93 46.2
vmacro11860 Vaccinium macrocarpon HOM05D004367 ORTHO05D004937 6.6e-10 67.8 89 44.9
Glyma.13G277700 Glycine max HOM05D004367 ORTHO05D004937 1.5e-09 66.6 91 42.9
Prupe.4G182900 Prunus persica HOM05D004367 ORTHO05D004937 1.9e-09 66.2 100 42.0
Cfa020594 Carpinus fangiana HOM05D004367 ORTHO05D004937 4.3e-09 65.1 109 40.4
CiPaw.11G168700 Carya illinoinensis HOM05D004367 ORTHO05D004937 4.3e-09 65.1 91 41.8
Haze_09419 Corylus avellana HOM05D004367 ORTHO05D004937 4.3e-09 65.1 95 43.2
SGA_v2.0_scaffold73G24268 Striga asiatica HOM05D004367 ORTHO05D004937 4.3e-09 65.1 110 39.1
Aqoxy4G00819 Aquilegia oxysepala HOM05D004367 ORTHO05D004937 5.6e-09 64.7 108 38.9
Lalb_Chr25g0286441 Lupinus albus HOM05D004367 ORTHO05D004937 5.6e-09 64.7 94 42.6
MD11G1244500 Malus domestica HOM05D004367 ORTHO05D004937 5.6e-09 64.7 100 40.0
Phvul.005G070800 Phaseolus vulgaris HOM05D004367 ORTHO05D004937 7.3e-09 64.3 73 49.3
FvH4_3g20190 Fragaria vesca HOM05D004367 ORTHO05D004937 9.5e-09 63.9 88 44.3
CsaV3_4G033760 Cucumis sativus L. HOM05D004367 ORTHO05D004937 1.2e-08 63.5 92 40.2
MD03G1226500 Malus domestica HOM05D004367 ORTHO05D004937 1.2e-08 63.5 102 39.2
Sed0004687 Sechium edule HOM05D004367 ORTHO05D004937 2.1e-08 62.8 94 43.6
AUR62034287 Chenopodium quinoa HOM05D004367 ORTHO05D004937 3.6e-08 62.0 79 46.8
FAN16G0302 Fragaria x ananassa HOM05D004367 ORTHO05D004937 4.7e-08 61.6 88 42.0
Ah.06g184060 Amaranthus hybridus HOM05D004367 ORTHO05D004937 8.1e-08 60.8 92 40.2
EL10Ac4g08166 Beta vulgaris HOM05D004367 ORTHO05D004937 8.1e-08 60.8 92 40.2
MBI07_g32654_MAGBIO Magnolia biondii HOM05D004367 ORTHO05D004937 8.1e-08 60.8 88 39.8
unitig_899.g15291 Utricularia gibba HOM05D004367 ORTHO05D004937 1.1e-07 60.5 90 42.2
Medtr2g079330 Medicago truncatula HOM05D004367 ORTHO05D004937 1.4e-07 60.1 91 42.9
Psat5g242760 Pisum sativum HOM05D004367 ORTHO05D004937 1.4e-07 60.1 98 41.8
RcHm_v2.0_Chr5g0034001 Rosa chinensis HOM05D004367 ORTHO05D004937 1.8e-07 59.7 91 42.9
Nn1g06556 Nelumbo nucifera HOM05D004367 ORTHO05D004937 2.3e-07 59.3 92 38.0
MELO3C016705.2 Cucumis melo HOM05D004367 ORTHO05D004937 3.1e-07 58.9 94 38.3
FAN25G3266 Fragaria x ananassa HOM05D004367 ORTHO05D004937 3.1e-07 58.9 88 42.0
PGR083G2352 Punica granatum HOM05D004367 ORTHO05D004937 3.1e-07 58.9 102 38.2
Manes.03G110700 Manihot esculenta HOM05D004367 ORTHO05D004937 4.0e-07 58.5 93 37.6
Ciclev10008024m.g Citrus clementina HOM05D004367 ORTHO05D004937 5.2e-07 58.2 83 42.2
Eucgr.F01119 Eucalyptus grandis HOM05D004367 ORTHO05D004937 5.2e-07 58.2 93 40.9
FAN21G3330 Fragaria x ananassa HOM05D004367 ORTHO05D004937 5.2e-07 58.2 88 42.0
arahy.Tifrunner.gnm1.ann1.9F49MR Arachis hypogaea HOM05D002009 ORTHO05D004937 8.9e-07 57.4 72 45.8
ECA234G0664 Erigeron canadensis HOM05D004367 ORTHO05D004937 8.9e-07 57.4 89 39.3
CSS0040030 Camellia sinensis var. sinensis HOM05D004367 ORTHO05D004937 1.2e-06 57.0 51 54.9
ClCG11G018120 Citrullus lanatus HOM05D004367 ORTHO05D004937 2.0e-06 56.2 91 38.5
TWI39G0928 Tripterygium wilfordii HOM05D004367 ORTHO05D004937 2.0e-06 56.2 90 42.2
Cc05_g12110 Coffea canephora HOM05D004367 ORTHO05D004937 2.6e-06 55.8 119 35.3
PSO210G1788 Papaver somniferum HOM05D004367 ORTHO05D004937 3.4e-06 55.5 106 34.9
Atru.chr2.2651 Acer truncatum HOM05D004367 ORTHO05D004937 7.6e-06 54.3 77 42.9
Atru.chr2.2673 Acer truncatum HOM05D004367 ORTHO05D004937 7.6e-06 54.3 77 42.9
arahy.Tifrunner.gnm1.ann1.6ZWE2K Arachis hypogaea HOM05D004367 ORTHO05D004937 7.6e-06 54.3 86 39.5
arahy.Tifrunner.gnm1.ann1.SV3A8G Arachis hypogaea HOM05D004367 ORTHO05D004937 7.6e-06 54.3 86 39.5
VMungo1080G0845 Vigna mungo HOM05D004367 ORTHO05D004937 7.6e-06 54.3 91 37.4


User provided reference genes

Program Settings