Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20561 Davidia involucrata HOM05D000045 ORTHO05D002701 6.5e-82 307.4 158 100.0
Dinv20735 Davidia involucrata HOM05D000045 ORTHO05D002701 6.5e-82 307.4 158 100.0
Lj7C67T4 Lonicera japonica HOM05D000045 ORTHO05D000067 6.4e-21 104.8 117 49.6
CSS0004264 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.5e-17 93.6 79 54.4
CSS0045300 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.5e-17 93.6 79 54.4
PGR044G2471 Punica granatum HOM05D000045 ORTHO05D000067 9.5e-17 90.9 96 49.0
TPR.G23676 Trifolium pratense HOM05D000045 ORTHO05D002701 1.5e-14 83.6 116 41.4
CiPaw.03G222600 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.0e-14 83.2 77 51.9
CiPaw.15G062800 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.0e-14 83.2 77 51.9
TPR.G14927 Trifolium pratense HOM05D000045 ORTHO05D000067 7.5e-14 81.3 114 39.5
TPR.G32734 Trifolium pratense HOM05D000045 ORTHO05D000067 7.5e-14 81.3 112 42.9
TPR.G40309 Trifolium pratense HOM05D000045 ORTHO05D000067 9.8e-14 80.9 115 39.1
CiPaw.09G196800 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.9e-13 79.3 77 50.6
CiPaw.07G176900 Carya illinoinensis HOM05D000045 ORTHO05D000067 3.7e-13 79.0 77 50.6
CiPaw.07G200600 Carya illinoinensis HOM05D000045 ORTHO05D000067 3.7e-13 79.0 138 37.0
Potri.006G039700 Populus trichocarpa HOM05D001299 ORTHO05D013156 6.4e-13 78.2 79 48.1
QL07p011181 Quercus lobata HOM05D001299 ORTHO05D013156 6.4e-13 78.2 79 48.1
TPR.G20817 Trifolium pratense HOM05D000045 ORTHO05D000067 6.4e-13 78.2 104 38.5
CiPaw.16G049800 Carya illinoinensis HOM05D000045 ORTHO05D000067 8.3e-13 77.8 78 47.4
CiPaw.06G017700 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.4e-12 77.0 143 39.2
TPR.G38495 Trifolium pratense HOM05D000045 ORTHO05D000067 1.4e-12 77.0 115 36.5
Sabra06G0026900 Salix brachista HOM05D006326 ORTHO05D007589 2.4e-12 76.3 128 37.5
SabraUnG0002500 Salix brachista HOM05D006326 ORTHO05D007589 2.4e-12 76.3 128 37.5
Sabra06G0026800 Salix brachista HOM05D001299 ORTHO05D013156 3.2e-12 75.9 79 46.8
SabraUnG0002400 Salix brachista HOM05D001299 ORTHO05D013156 3.2e-12 75.9 79 46.8
HPP92_002800 Vanilla planifolia HOM05D000045 ORTHO05D000067 4.1e-12 75.5 86 47.7
CiPaw.05G224800 Carya illinoinensis HOM05D000045 ORTHO05D000067 7.1e-12 74.7 124 38.7
CiPaw.13G125900 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.6e-11 73.6 78 44.9
Prupe.8G014900 Prunus persica HOM05D000045 ORTHO05D000067 1.6e-11 73.6 76 50.0
CiPaw.01G071100 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.1e-11 73.2 81 44.4
CiPaw.01G259100 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.1e-11 73.2 114 38.6
CiPaw.03G259700 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.1e-11 73.2 81 44.4
CiPaw.15G043900 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.1e-11 73.2 77 48.1
CiPaw.09G139500 Carya illinoinensis HOM05D000045 ORTHO05D002701 2.7e-11 72.8 77 45.5
CSS0047537 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.5e-11 72.4 96 38.5
Potri.006G039800 Populus trichocarpa HOM05D001299 ORTHO05D013156 6.0e-11 71.6 114 39.5
CiPaw.06G047200 Carya illinoinensis HOM05D000045 ORTHO05D000067 7.8e-11 71.2 81 43.2
CiPaw.11G070100 Carya illinoinensis HOM05D000045 ORTHO05D000067 7.8e-11 71.2 119 38.7
Medtr7g031620 Medicago truncatula HOM05D000045 ORTHO05D002701 7.8e-11 71.2 71 49.3
Prupe.6G116200 Prunus persica HOM05D000045 ORTHO05D002701 7.8e-11 71.2 102 43.1
FvH4_2g24401 Fragaria vesca HOM05D000045 ORTHO05D000067 1.3e-10 70.5 112 39.3
CSS0030058 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.7e-10 70.1 88 42.0
Cpa.g.c45591 Carica papaya HOM05D000045 ORTHO05D002701 1.7e-10 70.1 117 39.3
CiPaw.01G072300 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.7e-10 70.1 116 37.9
CiPaw.05G186800 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.7e-10 70.1 78 42.3
CiPaw.16G119700 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.7e-10 70.1 131 36.6
ECA240G2379 Erigeron canadensis HOM05D000045 ORTHO05D000067 2.3e-10 69.7 110 38.2
TPR.G21972 Trifolium pratense HOM05D000045 ORTHO05D000067 3.0e-10 69.3 103 39.8
CiPaw.05G188500 Carya illinoinensis HOM05D000045 ORTHO05D000067 3.9e-10 68.9 134 35.1
CiPaw.01G139200 Carya illinoinensis HOM05D000045 ORTHO05D000067 5.1e-10 68.6 111 38.7
CiPaw.01G219800 Carya illinoinensis HOM05D000045 ORTHO05D000067 5.1e-10 68.6 142 34.5
CiPaw.05G005200 Carya illinoinensis HOM05D000045 ORTHO05D000067 5.1e-10 68.6 110 37.3
CSS0005556 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 6.6e-10 68.2 104 36.5
CiPaw.11G177400 Carya illinoinensis HOM05D000045 ORTHO05D002701 8.6e-10 67.8 105 40.0
HPP92_004651 Vanilla planifolia HOM05D000045 ORTHO05D000067 8.6e-10 67.8 99 40.4
CiPaw.15G163100 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.1e-09 67.4 77 44.2
Aqoxy7G02166 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.5e-09 67.0 120 37.5
CiPaw.08G134300 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.5e-09 67.0 107 38.3
CiPaw.15G141000 Carya illinoinensis HOM05D000045 ORTHO05D000067 1.5e-09 67.0 73 45.2
PSO541G3849 Papaver somniferum HOM05D000045 ORTHO05D000067 1.5e-09 67.0 74 45.9
QL05p086352 Quercus lobata HOM05D000045 ORTHO05D000067 1.5e-09 67.0 136 31.6
CiPaw.01G228200 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.5e-09 66.2 73 45.2
Atru.ctg1152.6 Acer truncatum HOM05D000045 ORTHO05D000067 3.3e-09 65.9 81 46.9
CiPaw.09G068500 Carya illinoinensis HOM05D000045 ORTHO05D000067 3.3e-09 65.9 98 39.8
ECA240G0947 Erigeron canadensis HOM05D000045 ORTHO05D000067 3.3e-09 65.9 124 36.3
Os02g0608300 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 3.3e-09 65.9 107 39.3
Atru.chr1.1263 Acer truncatum HOM05D000045 ORTHO05D002701 4.3e-09 65.5 114 35.1
CSS0031467 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 4.3e-09 65.5 108 36.1
CiPaw.04G062400 Carya illinoinensis HOM05D000045 ORTHO05D000067 4.3e-09 65.5 73 45.2
CiPaw.14G039100 Carya illinoinensis HOM05D000045 ORTHO05D002701 4.3e-09 65.5 75 46.7
COL.COLO4_27566 Corchorus olitorius HOM05D000045 ORTHO05D000067 4.3e-09 65.5 78 47.4
PSO384G4836 Papaver somniferum HOM05D000045 ORTHO05D000067 4.3e-09 65.5 82 39.0
PSO478G0574 Papaver somniferum HOM05D000045 ORTHO05D000067 4.3e-09 65.5 82 39.0
SGA_v2.0_scaffold18G08264 Striga asiatica HOM05D000045 ORTHO05D009940 4.3e-09 65.5 83 42.2
SGA_v2.0_scaffold97G29227 Striga asiatica HOM05D000045 ORTHO05D012494 4.3e-09 65.5 89 44.9
TWI60G1535 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 4.3e-09 65.5 78 43.6
Atru.chr2.2016 Acer truncatum HOM05D000045 ORTHO05D000067 5.6e-09 65.1 99 37.4
Atru.chr8.388 Acer truncatum HOM05D000045 ORTHO05D000067 5.6e-09 65.1 81 46.9
CiPaw.10G145800 Carya illinoinensis HOM05D000045 ORTHO05D000067 5.6e-09 65.1 99 37.4
ECA232G1086 Erigeron canadensis HOM05D000045 ORTHO05D000067 5.6e-09 65.1 79 41.8
SGA_v2.0_scaffold33G13568 Striga asiatica HOM05D027553 ORTHO05D014193 9.5e-09 64.3 83 42.2
DCAR_021800 Daucus carota HOM05D000045 ORTHO05D002701 1.2e-08 63.9 73 42.5
QL03p030360 Quercus lobata HOM05D000045 ORTHO05D000067 1.2e-08 63.9 108 34.3
Atru.chr2.3305 Acer truncatum HOM05D000045 ORTHO05D002701 1.6e-08 63.5 111 36.9
PSO063G4975 Papaver somniferum HOM05D000160 ORTHO05D011801 1.6e-08 63.5 120 39.2
Aqoxy3G02769 Aquilegia oxysepala HOM05D000045 ORTHO05D002701 2.1e-08 63.2 78 41.0
QL02p026731 Quercus lobata HOM05D000045 ORTHO05D000067 2.1e-08 63.2 105 33.3
QL93p2012_0049 Quercus lobata HOM05D000045 ORTHO05D000067 2.1e-08 63.2 105 33.3
TWI56G0267 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.1e-08 63.2 85 40.0
vmacro16255 Vaccinium macrocarpon HOM05D000045 ORTHO05D002701 2.1e-08 63.2 108 38.9
CSS0038307 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.8e-08 62.8 73 41.1
CiPaw.06G154700 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.8e-08 62.8 110 37.3
TWI79G0782 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.8e-08 62.8 76 44.7
PSO384G3943 Papaver somniferum HOM05D000045 ORTHO05D002701 3.6e-08 62.4 120 38.3
PSO832G1352 Papaver somniferum HOM05D000045 ORTHO05D000067 3.6e-08 62.4 82 37.8
Prupe.4G256500 Prunus persica HOM05D000045 ORTHO05D000067 3.6e-08 62.4 98 37.8
SGA_v2.0_scaffold68G22942 Striga asiatica HOM05D000045 ORTHO05D002701 4.7e-08 62.0 119 32.8
CANSAT56G2885 Cannabis sativa HOM05D000045 ORTHO05D000067 6.2e-08 61.6 100 36.0
PSO017G5661 Papaver somniferum HOM05D000045 ORTHO05D000067 6.2e-08 61.6 129 35.7
Atru.chr11.229 Acer truncatum HOM05D000045 ORTHO05D002701 8.1e-08 61.2 136 34.6
CiPaw.04G006000 Carya illinoinensis HOM05D000045 ORTHO05D000067 8.1e-08 61.2 85 38.8
CiPaw.10G080500 Carya illinoinensis HOM05D000045 ORTHO05D000067 8.1e-08 61.2 103 36.9
COL.COLO4_12305 Corchorus olitorius HOM05D000045 ORTHO05D000067 8.1e-08 61.2 79 45.6
Prupe.2G013600 Prunus persica HOM05D000045 ORTHO05D000067 8.1e-08 61.2 109 33.0
Atru.chr7.967 Acer truncatum HOM05D000045 ORTHO05D000067 1.1e-07 60.8 111 33.3
Glyma.11G126700 Glycine max HOM05D000045 ORTHO05D000067 1.1e-07 60.8 110 36.4
CSS0028932 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.4e-07 60.5 107 34.6
CSS0042980 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 1.4e-07 60.5 108 38.0
TWI63G1556 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.4e-07 60.5 82 39.0
Aqoxy6G02399 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.8e-07 60.1 89 32.6
TWI81G0958 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.8e-07 60.1 76 40.8
HPP92_013680 Vanilla planifolia HOM05D000045 ORTHO05D000067 1.8e-07 60.1 144 31.9
CSS0038184 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 2.3e-07 59.7 112 35.7
CDE07G0457 Ceratophyllum demersum HOM05D000045 ORTHO05D000067 2.3e-07 59.7 138 37.0
Nn8g39558 Nelumbo nucifera HOM05D000045 ORTHO05D000067 2.3e-07 59.7 141 31.9
PSO210G6153 Papaver somniferum HOM05D000045 ORTHO05D000067 2.3e-07 59.7 76 35.5
CiPaw.16G024000 Carya illinoinensis HOM05D000045 ORTHO05D000067 3.1e-07 59.3 110 33.6
PSO017G2907 Papaver somniferum HOM05D000045 ORTHO05D000067 3.1e-07 59.3 107 33.6
TWI09G1457 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.1e-07 59.3 112 35.7
CiPaw.07G027200 Carya illinoinensis HOM05D000045 ORTHO05D000067 4.0e-07 58.9 111 32.4
MELO3C030466.2 Cucumis melo HOM05D000045 ORTHO05D000067 4.0e-07 58.9 102 41.2
TWI39G0460 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 4.0e-07 58.9 102 36.3
CiPaw.05G024400 Carya illinoinensis HOM05D000045 ORTHO05D000067 5.2e-07 58.5 93 35.5
Haze_21498 Corylus avellana HOM05D000191 ORTHO05D000122 5.2e-07 58.5 93 39.8
PSO339G4486 Papaver somniferum HOM05D000045 ORTHO05D002701 5.2e-07 58.5 78 39.7
TWI60G1422 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 5.2e-07 58.5 85 37.6
Aqoxy2G00230 Aquilegia oxysepala HOM05D000045 ORTHO05D002701 6.8e-07 58.2 118 28.0
Aqoxy3G02402 Aquilegia oxysepala HOM05D000045 ORTHO05D002701 6.8e-07 58.2 112 33.0
ClCG05G016770 Citrullus lanatus HOM05D000045 ORTHO05D000067 6.8e-07 58.2 93 41.9
Os02g0202800 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 6.8e-07 58.2 81 39.5
TWI39G0068 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 6.8e-07 58.2 102 36.3
TWI59G1003 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 6.8e-07 58.2 79 40.5
TWI75G1497 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 6.8e-07 58.2 76 39.5
SGA_v2.0_scaffold106G30721 Striga asiatica HOM05D000045 ORTHO05D009940 8.9e-07 57.8 78 37.2
SGA_v2.0_scaffold240G44110 Striga asiatica HOM05D000045 ORTHO05D002701 8.9e-07 57.8 78 37.2
TWI23G1327 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 8.9e-07 57.8 79 40.5
Os03g0843700 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 1.2e-06 57.4 79 40.5
Os11g0681300 Oryza sativa ssp. japonica HOM05D000045 ORTHO05D000067 1.2e-06 57.4 61 44.3
Potri.006G256300 Populus trichocarpa HOM05D000045 ORTHO05D000067 1.2e-06 57.4 92 41.3
QL02p021327 Quercus lobata HOM05D000045 ORTHO05D000067 1.2e-06 57.4 92 41.3
SGA_v2.0_scaffold36G14482 Striga asiatica HOM05D024854 ORTHO05D009940 1.2e-06 57.4 77 40.3
TWI73G0003 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.2e-06 57.4 130 29.2
SGA_v2.0_scaffold5G02711 Striga asiatica HOM05D000045 ORTHO05D000067 1.5e-06 57.0 76 42.1
CiPaw.07G224700 Carya illinoinensis HOM05D000045 ORTHO05D000067 2.0e-06 56.6 93 40.9
Phvul.002G101200 Phaseolus vulgaris HOM05D000045 ORTHO05D000067 2.0e-06 56.6 78 44.9
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.0e-06 56.6 126 33.3
VMungo0251G2295 Vigna mungo HOM05D000045 ORTHO05D000067 2.0e-06 56.6 78 44.9
PSO017G0532 Papaver somniferum HOM05D000045 ORTHO05D000067 2.6e-06 56.2 107 32.7
TWI34G0144 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.6e-06 56.2 112 33.0
CSS0010009 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.4e-06 55.8 73 42.5
CSS0020885 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.4e-06 55.8 107 33.6
CiPaw.03G112500 Carya illinoinensis HOM05D000045 ORTHO05D000067 3.4e-06 55.8 81 37.0
Eucgr.C04090 Eucalyptus grandis HOM05D000045 ORTHO05D000067 3.4e-06 55.8 80 41.2
PSO017G3980 Papaver somniferum HOM05D000045 ORTHO05D000067 3.4e-06 55.8 76 38.2
QL04p062123 Quercus lobata HOM05D000045 ORTHO05D000067 3.4e-06 55.8 111 36.0
TWI38G2084 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 3.4e-06 55.8 130 28.5
Ciclev10033711m.g Citrus clementina HOM05D000045 ORTHO05D002701 4.4e-06 55.5 77 41.6
CsaV3_3G046280 Cucumis sativus L. HOM05D000045 ORTHO05D000067 4.4e-06 55.5 109 36.7
Migut.I00751 Erythranthe guttata HOM05D000045 ORTHO05D000067 4.4e-06 55.5 84 44.0
FvH4_2g28851 Fragaria vesca HOM05D000045 ORTHO05D000067 4.4e-06 55.5 78 43.6
Glyma.08G172600 Glycine max HOM05D000045 ORTHO05D000067 4.4e-06 55.5 76 36.8
PGR031G2293 Punica granatum HOM05D000045 ORTHO05D000067 4.4e-06 55.5 87 40.2
Sabra06G0200500 Salix brachista HOM05D000045 ORTHO05D000067 4.4e-06 55.5 109 37.6
TWI14G0305 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 4.4e-06 55.5 112 33.9
MSTRG.11565 Avicennia marina HOM05D000045 ORTHO05D000067 5.8e-06 55.1 78 42.3
Dinv41265 Davidia involucrata HOM05D000045 ORTHO05D000067 5.8e-06 55.1 80 41.2
MD17G1214400 Malus domestica HOM05D000045 ORTHO05D000067 5.8e-06 55.1 82 41.5
PSO063G2828 Papaver somniferum HOM05D000045 ORTHO05D000067 5.8e-06 55.1 76 36.8
Prupe.3G090300 Prunus persica HOM05D000045 ORTHO05D000067 5.8e-06 55.1 82 41.5
TWI75G0535 Tripterygium wilfordii HOM05D000045 ORTHO05D002701 5.8e-06 55.1 101 33.7
TWI81G0019 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 5.8e-06 55.1 112 32.1
Actinidia01733 Actinidia chinensis HOM05D000045 ORTHO05D000067 7.6e-06 54.7 82 40.2
Actinidia22333 Actinidia chinensis HOM05D000045 ORTHO05D000067 7.6e-06 54.7 110 39.1
CSS0025852 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 7.6e-06 54.7 82 40.2
Haze_13644 Corylus avellana HOM05D000045 ORTHO05D016900 7.6e-06 54.7 96 34.4
Gohir.D06G101000 Gossypium hirsutum HOM05D000045 ORTHO05D000067 7.6e-06 54.7 78 39.7
Gorai.010G116000 Gossypium raimondii HOM05D000045 ORTHO05D000067 7.6e-06 54.7 78 39.7
PSO384G1890 Papaver somniferum HOM05D000045 ORTHO05D002701 7.6e-06 54.7 113 27.4
CSS0018417 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.9e-06 54.3 107 34.6
CSS0026518 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 9.9e-06 54.3 135 35.6
Cpa.g.sc167.13 Carica papaya HOM05D000045 ORTHO05D000067 9.9e-06 54.3 82 41.5
CiPaw.03G112600 Carya illinoinensis HOM05D000045 ORTHO05D000067 9.9e-06 54.3 80 41.2
Gohir.A05G122400 Gossypium hirsutum HOM05D000045 ORTHO05D000067 9.9e-06 54.3 110 36.4
RcHm_v2.0_Chr6g0297621 Rosa chinensis HOM05D000045 ORTHO05D000067 9.9e-06 54.3 78 42.3
TWI09G0930 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 9.9e-06 54.3 99 33.3


User provided reference genes

Program Settings