Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20728 Davidia involucrata HOM05D000364 ORTHO05D000235 6.5e-224 780.4 395 100.0
Dinv02453 Davidia involucrata HOM05D000364 ORTHO05D000235 1.3e-142 510.4 434 69.6
GSVIVG01010280001 Vitis vinifera HOM05D000364 ORTHO05D000235 3.0e-112 409.5 436 57.1
QL03p041263 Quercus lobata HOM05D000364 ORTHO05D000235 2.6e-111 406.4 434 56.7
TAR622G0965 Trochodendron aralioides HOM05D000364 ORTHO05D000235 1.3e-102 377.5 421 57.5
Actinidia37469 Actinidia chinensis HOM05D000364 ORTHO05D000235 2.0e-100 370.2 423 56.0
Dinv02454 Davidia involucrata HOM05D000364 ORTHO05D000235 1.7e-99 367.1 332 64.8
Manes.15G141700 Manihot esculenta HOM05D000364 ORTHO05D000235 7.7e-92 341.7 450 50.7
Nn4g24808 Nelumbo nucifera HOM05D000364 ORTHO05D000235 3.8e-91 339.3 421 52.3
Atru.chr11.1083 Acer truncatum HOM05D000364 ORTHO05D000235 3.3e-90 336.3 441 51.5
Potri.008G142700 Populus trichocarpa HOM05D000364 ORTHO05D000235 2.1e-89 333.6 433 50.1
Manes.17G092400 Manihot esculenta HOM05D000364 ORTHO05D000235 2.0e-87 327.0 449 51.0
Potri.010G098900 Populus trichocarpa HOM05D000364 ORTHO05D000235 2.8e-86 323.2 432 49.3
CiPaw.05G164000 Carya illinoinensis HOM05D000364 ORTHO05D000235 6.3e-86 322.0 411 51.8
Sabra08G0108000 Salix brachista HOM05D000364 ORTHO05D000235 1.0e-80 304.7 426 48.8
Lj5g0015794 Lotus japonicus HOM05D000364 ORTHO05D000235 4.0e-80 302.8 435 46.7
Glyma.20G184300 Glycine max HOM05D000364 ORTHO05D000235 1.5e-79 300.8 439 47.2
Glyma.10G206300 Glycine max HOM05D000364 ORTHO05D000235 1.3e-78 297.7 432 47.2
Phvul.007G100300 Phaseolus vulgaris HOM05D000364 ORTHO05D000235 2.9e-78 296.6 436 45.9
Sabra10G0071400 Salix brachista HOM05D000364 ORTHO05D000235 3.7e-78 296.2 433 48.0
Aqoxy3G04177 Aquilegia oxysepala HOM05D000364 ORTHO05D000235 1.2e-76 291.2 425 47.8
TWI74G0886 Tripterygium wilfordii HOM05D000364 ORTHO05D000235 1.2e-76 291.2 442 48.9
VMungo0720G2462 Vigna mungo HOM05D000364 ORTHO05D000235 3.0e-75 286.6 437 45.3
TAR400G0002 Trochodendron aralioides HOM05D000364 ORTHO05D000235 8.9e-72 275.0 433 46.2
DCAR_030325 Daucus carota HOM05D000364 ORTHO05D000235 3.7e-70 269.6 425 47.1
Psat6g180960 Pisum sativum HOM05D000364 ORTHO05D000235 6.4e-70 268.9 443 45.8
Thecc.02G295600 Theobroma cacao HOM05D000364 ORTHO05D000235 1.9e-69 267.3 441 46.0
Ca_10533_v3 Cicer arietinum L. HOM05D000364 ORTHO05D000235 3.5e-68 263.1 457 43.3
Lsat_1_v5_gn_4_21821 Lactuca sativa HOM05D000364 ORTHO05D000235 1.0e-67 261.5 393 44.0
Lalb_Chr02g0151931 Lupinus albus HOM05D000364 ORTHO05D000235 1.0e-67 261.5 418 46.4
HanXRQChr16g0528191 Helianthus annuus HOM05D000364 ORTHO05D000235 9.5e-66 255.0 422 42.7
Cc11_g03260 Coffea canephora HOM05D000364 ORTHO05D000235 4.7e-65 252.7 430 43.3
Duzib251G0837 Durio zibethinus HOM05D000364 ORTHO05D000235 8.1e-65 251.9 467 42.4
Oeu044055.1 Olea europaea HOM05D000364 ORTHO05D000235 1.8e-64 250.8 437 44.6
Duzib268G0885 Durio zibethinus HOM05D000364 ORTHO05D000235 8.9e-64 248.4 444 42.6
Medtr1g094085 Medicago truncatula HOM05D000364 ORTHO05D000235 8.9e-64 248.4 462 44.6
Rhsim09G0079600 Rhododendron simsii HOM05D000364 ORTHO05D000235 1.5e-63 247.7 340 48.8
Cpa.g.c26556.1 Carica papaya HOM05D000364 ORTHO05D000235 4.4e-63 246.1 454 43.4
TPR.G9823 Trifolium pratense HOM05D000364 ORTHO05D000235 9.9e-63 245.0 457 42.5
Lalb_Chr06g0170311 Lupinus albus HOM05D000364 ORTHO05D000235 1.3e-62 244.6 411 44.8
Oeu001132.1 Olea europaea HOM05D000364 ORTHO05D000235 1.3e-62 244.6 432 46.1
Haze_01586 Corylus avellana HOM05D000364 ORTHO05D000235 2.2e-62 243.8 394 47.2
Dinv20727 Davidia involucrata HOM05D000364 ORTHO05D000235 3.7e-62 243.0 368 50.0
vmacro10775 Vaccinium macrocarpon HOM05D000364 ORTHO05D000235 1.6e-60 237.7 345 47.5
DCAR_023525 Daucus carota HOM05D000364 ORTHO05D000235 3.9e-59 233.0 418 42.3
Gorai.005G157300 Gossypium raimondii HOM05D000364 ORTHO05D000235 1.1e-58 231.5 454 41.2
Prupe.1G341300 Prunus persica HOM05D000364 ORTHO05D000235 1.1e-58 231.5 484 43.6
Gohir.D02G139500 Gossypium hirsutum HOM05D000364 ORTHO05D000235 1.5e-58 231.1 454 41.0
PSO782G1279 Papaver somniferum HOM05D000364 ORTHO05D000235 5.6e-58 229.2 449 41.9
PSO063G4870 Papaver somniferum HOM05D000364 ORTHO05D000235 7.3e-58 228.8 444 41.4
MD13G1012600 Malus domestica HOM05D000364 ORTHO05D000235 2.1e-57 227.3 482 42.7
ECA234G3894 Erigeron canadensis HOM05D000364 ORTHO05D000235 4.7e-57 226.1 418 39.2
Gohir.A03G115700 Gossypium hirsutum HOM05D000364 ORTHO05D000235 8.9e-56 221.9 454 41.4
Eucgr.B02624 Eucalyptus grandis HOM05D000364 ORTHO05D000235 3.4e-55 219.9 435 41.4
COL.COLO4_16623 Corchorus olitorius HOM05D000364 ORTHO05D000235 5.8e-55 219.2 470 41.9
MD16G1009300 Malus domestica HOM05D000364 ORTHO05D000235 3.8e-54 216.5 476 41.0
CSS0015829 Camellia sinensis var. sinensis HOM05D000364 ORTHO05D000235 1.2e-52 211.5 304 46.1
Lj6A726G32 Lonicera japonica HOM05D000364 ORTHO05D000235 3.5e-52 209.9 279 50.9
arahy.Tifrunner.gnm1.ann1.70FQSK Arachis hypogaea HOM05D000364 ORTHO05D000235 4.4e-47 193.0 447 36.9
arahy.Tifrunner.gnm1.ann1.3QD5VY Arachis hypogaea HOM05D000364 ORTHO05D000235 1.3e-46 191.4 440 37.7
Ciclev10005130m.g Citrus clementina HOM05D000364 ORTHO05D000235 1.3e-46 191.4 362 43.1
RcHm_v2.0_Chr4g0445691 Rosa chinensis HOM05D000364 ORTHO05D000235 3.0e-43 180.3 405 41.0
CsaV3_5G012430 Cucumis sativus L. HOM05D000364 ORTHO05D000235 4.8e-41 172.9 415 37.8
ClCG11G000750 Citrullus lanatus HOM05D000364 ORTHO05D000235 2.4e-40 170.6 408 37.3
THA.LOC104806574 Tarenaya hassleriana HOM05D000364 ORTHO05D000235 5.3e-40 169.5 424 36.1
FAN17G2716 Fragaria x ananassa HOM05D000364 ORTHO05D000235 2.2e-38 164.1 408 39.5
CANSAT78G2017 Cannabis sativa HOM05D000364 ORTHO05D000235 1.1e-37 161.8 542 34.3
MELO3C022574.2 Cucumis melo HOM05D000364 ORTHO05D000235 5.6e-34 149.4 412 36.9
FvH4_4g36070 Fragaria vesca HOM05D000364 ORTHO05D000235 5.6e-34 149.4 408 36.5
FAN12G4025 Fragaria x ananassa HOM05D000364 ORTHO05D000235 5.6e-34 149.4 408 36.5
HPP92_008581 Vanilla planifolia HOM05D000364 ORTHO05D000235 6.2e-33 146.0 399 35.1
FAN22G0918 Fragaria x ananassa HOM05D000364 ORTHO05D000235 4.0e-32 143.3 408 36.5
Sed0015908 Sechium edule HOM05D000364 ORTHO05D000235 6.9e-32 142.5 406 34.7
FAN07G1309 Fragaria x ananassa HOM05D000364 ORTHO05D000235 3.4e-31 140.2 404 36.1
PGR004G0131 Punica granatum HOM05D000364 ORTHO05D000235 3.3e-26 123.6 409 33.3
Thhalv10007669m.g Eutrema salsugineum HOM05D000364 ORTHO05D000235 1.1e-18 98.6 414 30.7
Sopen01g003430 Solanum pennellii HOM05D000364 ORTHO05D000235 4.1e-16 90.1 104 54.8
BcaB07g32766 Brassica carinata HOM05D000364 ORTHO05D000235 5.3e-16 89.7 415 29.9
A09p35160 Brassica napus HOM05D000364 ORTHO05D000235 1.2e-15 88.6 412 30.1
Solyc01g150101.1 Solanum lycopersicum HOM05D000364 ORTHO05D000235 1.2e-15 88.6 104 52.9
vmacro10774 Vaccinium macrocarpon HOM05D000364 ORTHO05D000235 2.0e-15 87.8 88 58.0
CARHR030570 Cardamine hirsuta HOM05D000364 ORTHO05D000235 3.4e-15 87.0 409 30.8
BraA09t39044Z Brassica rapa HOM05D000364 ORTHO05D000235 1.7e-14 84.7 412 29.9
AL1G45450 Arabidopsis lyrata HOM05D000364 ORTHO05D000235 3.8e-14 83.6 409 29.6
Carub.0001s2945 Capsella rubella HOM05D000364 ORTHO05D000235 5.0e-14 83.2 372 30.1
AT1G31050 Arabidopsis thaliana HOM05D000364 ORTHO05D000235 1.4e-13 81.6 359 27.6
Peaxi162Scf00097g02012 Petunia axillaris HOM05D000364 ORTHO05D000235 2.5e-13 80.9 353 32.6
BcaC05g27138 Brassica carinata HOM05D000364 ORTHO05D000235 7.9e-12 75.9 365 29.3
C05p30240 Brassica napus HOM05D000364 ORTHO05D000235 7.9e-12 75.9 365 29.3
Zm00001eb320070 Zea mays HOM05D000364 ORTHO05D000235 3.9e-11 73.6 460 27.4
BolC5t31765H Brassica oleracea HOM05D000364 ORTHO05D000235 5.1e-11 73.2 365 29.3
Sp1g26900 Schrenkiella parvula HOM05D000364 ORTHO05D000235 2.5e-10 70.9 398 27.4
BcaC05g27136 Brassica carinata HOM05D000364 ORTHO05D000235 3.4e-07 60.5 356 28.1
Os07g0471900 Oryza sativa ssp. japonica HOM05D000364 ORTHO05D000235 2.2e-06 57.8 47 70.2
Os04g0565900 Oryza sativa ssp. japonica HOM05D000364 ORTHO05D000235 5.0e-06 56.6 97 45.4


User provided reference genes

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