Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20697 Davidia involucrata HOM05D006519 ORTHO05D008306 1.3e-75 286.2 138 100.0
Lj9C454G3 Lonicera japonica HOM05D006519 ORTHO05D008306 1.2e-28 130.2 140 53.6
CSS0037543 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 6.1e-28 127.9 121 56.2
CANSAT80G0931 Cannabis sativa HOM05D006519 ORTHO05D008306 6.1e-28 127.9 121 53.7
TAR629G1196 Trochodendron aralioides HOM05D006519 ORTHO05D008306 3.0e-27 125.6 121 57.9
Hma1.2p1_0002F.1_g002800 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 4.0e-27 125.2 141 53.9
Rhsim12G0161700 Rhododendron simsii HOM05D006519 ORTHO05D008306 8.9e-27 124.0 124 54.8
Actinidia34959 Actinidia chinensis HOM05D006519 ORTHO05D008306 1.2e-26 123.6 121 54.5
CSS0018091 Camellia sinensis var. sinensis HOM05D006519 ORTHO05D008306 1.5e-26 123.2 121 54.5
GSVIVG01007824001 Vitis vinifera HOM05D006519 ORTHO05D008306 5.7e-26 121.3 121 54.5
Prupe.5G179000 Prunus persica HOM05D006519 ORTHO05D008306 2.9e-25 119.0 122 57.4
MD06G1181000 Malus domestica HOM05D006519 ORTHO05D008306 1.1e-24 117.1 121 53.7
Sc12g0005660 Simmondsia chinensis HOM05D006519 ORTHO05D008306 1.8e-24 116.3 122 54.1
DCAR_031285 Daucus carota HOM05D006519 ORTHO05D008306 2.4e-24 115.9 122 53.3
Gohir.A05G415200 Gossypium hirsutum HOM05D006519 ORTHO05D008306 3.2e-24 115.5 141 48.2
RcHm_v2.0_Chr7g0179701 Rosa chinensis HOM05D006519 ORTHO05D008306 3.2e-24 115.5 121 54.5
MD13G1183500 Malus domestica HOM05D006519 ORTHO05D008306 4.1e-24 115.2 121 53.7
Nn3g17016 Nelumbo nucifera HOM05D006519 ORTHO05D008306 5.4e-24 114.8 121 53.7
AUR62031043 Chenopodium quinoa HOM05D006519 ORTHO05D008306 9.2e-24 114.0 121 52.1
Ciclev10021480m.g Citrus clementina HOM05D006519 ORTHO05D008306 9.2e-24 114.0 121 52.1
Gohir.D04G001000 Gossypium hirsutum HOM05D006519 ORTHO05D008306 1.2e-23 113.6 140 47.9
AUR62008282 Chenopodium quinoa HOM05D006519 ORTHO05D008306 2.0e-23 112.8 121 51.2
Nitab4.5_0001642g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 2.0e-23 112.8 143 51.0
Nitab4.5_0003386g0010 Nicotiana tabacum HOM05D006519 ORTHO05D008306 2.0e-23 112.8 142 50.0
Hund02710 Selenicereus undatus HOM05D006519 ORTHO05D008306 2.7e-23 112.5 129 51.9
CiPaw.11G031700 Carya illinoinensis HOM05D006519 ORTHO05D008306 5.9e-23 111.3 124 51.6
MBI14_g12785_MAGBIO Magnolia biondii HOM05D006519 ORTHO05D008306 1.3e-22 110.2 124 50.8
Gorai.012G002000 Gossypium raimondii HOM05D006519 ORTHO05D008306 1.7e-22 109.8 141 46.8
EL10Ac5g10829 Beta vulgaris HOM05D006519 ORTHO05D008306 2.9e-22 109.0 135 45.9
Haze_07439 Corylus avellana HOM05D006519 ORTHO05D008306 3.9e-22 108.6 125 50.4
FvH4_5g16400 Fragaria vesca HOM05D006519 ORTHO05D008306 3.9e-22 108.6 121 52.9
FAN18G3891 Fragaria x ananassa HOM05D006519 ORTHO05D008306 3.9e-22 108.6 121 52.9
MD14G1186100 Malus domestica HOM05D006519 ORTHO05D008306 3.9e-22 108.6 124 50.8
Solyc03g113860.2 Solanum lycopersicum HOM05D006519 ORTHO05D008306 5.0e-22 108.2 150 46.0
Manes.06G100700 Manihot esculenta HOM05D006519 ORTHO05D008306 8.6e-22 107.5 121 47.9
PSO591G0501 Papaver somniferum HOM05D006519 ORTHO05D008306 8.6e-22 107.5 122 53.3
Sopen03g032910 Solanum pennellii HOM05D006519 ORTHO05D008306 1.5e-21 106.7 150 46.0
PGSC0003DMG400024585 Solanum tuberosum HOM05D006519 ORTHO05D008306 1.9e-21 106.3 150 45.3
ECA232G3316 Erigeron canadensis HOM05D006519 ORTHO05D008306 2.5e-21 105.9 123 48.0
FAN08G1114 Fragaria x ananassa HOM05D006519 ORTHO05D008306 3.3e-21 105.5 121 52.1
Ah.11g046180 Amaranthus hybridus HOM05D006519 ORTHO05D008306 4.3e-21 105.1 124 47.6
CAN.G853.13 Capsicum annuum HOM05D006519 ORTHO05D008306 7.3e-21 104.4 152 44.7
Cc04_g13570 Coffea canephora HOM05D006519 ORTHO05D008306 1.2e-20 103.6 129 45.7
FAN13G2537 Fragaria x ananassa HOM05D006519 ORTHO05D008306 1.2e-20 103.6 121 52.9
HanXRQChr09g0271821 Helianthus annuus HOM05D006519 ORTHO05D008306 1.6e-20 103.2 122 47.5
Oeu016332.2 Olea europaea HOM05D006519 ORTHO05D008306 2.8e-20 102.4 145 45.5
Lsat_1_v5_gn_4_73480 Lactuca sativa HOM05D006519 ORTHO05D008306 3.6e-20 102.1 122 45.9
Atru.chr9.2404 Acer truncatum HOM05D006519 ORTHO05D008306 6.1e-20 101.3 121 47.9
COL.COLO4_04635 Corchorus olitorius HOM05D006519 ORTHO05D008306 1.0e-19 100.5 122 45.1
Potri.012G076100 Populus trichocarpa HOM05D006519 ORTHO05D008306 1.4e-19 100.1 124 46.0
Thecc.03G004500 Theobroma cacao HOM05D006519 ORTHO05D008306 1.4e-19 100.1 122 45.1
Duzib068G0259 Durio zibethinus HOM05D006519 ORTHO05D008306 3.1e-19 99.0 125 48.0
SalBow5G4476 Salvia bowleyana HOM05D006519 ORTHO05D008306 3.1e-19 99.0 144 43.1
Migut.I00056 Erythranthe guttata HOM05D006519 ORTHO05D008306 4.0e-19 98.6 154 42.9
SalBow5G0752 Salvia bowleyana HOM05D006519 ORTHO05D008306 4.0e-19 98.6 144 42.4
Sabra12G0054300 Salix brachista HOM05D006519 ORTHO05D008306 5.8e-18 94.7 124 44.4
HanXRQChr11g0328331 Helianthus annuus HOM05D006519 ORTHO05D008306 2.9e-17 92.4 105 46.7
AT5G50110 Arabidopsis thaliana HOM05D006519 ORTHO05D008306 4.9e-17 91.7 123 43.1
THA.LOC104809258 Tarenaya hassleriana HOM05D006519 ORTHO05D008306 4.9e-17 91.7 122 41.8
TWI81G0852 Tripterygium wilfordii HOM05D006519 ORTHO05D008306 6.4e-17 91.3 123 43.1
MSTRG.11426 Avicennia marina HOM05D006519 ORTHO05D008306 1.1e-16 90.5 133 43.6
SGA_v2.0_scaffold467G52031 Striga asiatica HOM05D006519 ORTHO05D008306 1.4e-16 90.1 137 39.4
Carub.0008s1012 Capsella rubella HOM05D006519 ORTHO05D008306 1.9e-16 89.7 127 41.7
vmacro16588 Vaccinium macrocarpon HOM05D006519 ORTHO05D008306 1.9e-16 89.7 53 75.5
CARHR258520 Cardamine hirsuta HOM05D006519 ORTHO05D008306 2.4e-16 89.4 123 42.3
Lalb_Chr07g0182571 Lupinus albus HOM05D006519 ORTHO05D008306 2.4e-16 89.4 138 42.8
Sp6g11980 Schrenkiella parvula HOM05D006519 ORTHO05D008306 5.4e-16 88.2 125 41.6
VMungo1215G1861 Vigna mungo HOM05D006519 ORTHO05D008306 5.4e-16 88.2 124 43.5
arahy.Tifrunner.gnm1.ann1.L198ZR Arachis hypogaea HOM05D006519 ORTHO05D008306 9.2e-16 87.4 140 42.9
MELO3C002238.2 Cucumis melo HOM05D006519 ORTHO05D008306 9.2e-16 87.4 150 44.7
Peaxi162Scf00017g02523 Petunia axillaris HOM05D006519 ORTHO05D008306 9.2e-16 87.4 53 81.1
PGR083G2560 Punica granatum HOM05D006519 ORTHO05D008306 1.2e-15 87.0 121 42.1
Hma1.2p1_0002F.1_g002810 Hydrangea macrophylla HOM05D006519 ORTHO05D008306 2.0e-15 86.3 53 79.2
Cpa.g.sc35.56 Carica papaya HOM05D006519 ORTHO05D008306 2.7e-15 85.9 53 77.4
arahy.Tifrunner.gnm1.ann1.IBQC5J Arachis hypogaea HOM05D006519 ORTHO05D008306 3.5e-15 85.5 124 45.2
CsaV3_1G008220 Cucumis sativus L. HOM05D006519 ORTHO05D008306 3.5e-15 85.5 128 46.1
Aa31sc174G50 Aethionema arabicum HOM05D006519 ORTHO05D008306 1.0e-14 84.0 138 39.1
Medtr4g106410 Medicago truncatula HOM05D006519 ORTHO05D008306 1.0e-14 84.0 123 40.7
Thhalv10014373m.g Eutrema salsugineum HOM05D006519 ORTHO05D008306 1.3e-14 83.6 123 39.8
TPR.G37507 Trifolium pratense HOM05D006519 ORTHO05D008306 2.3e-14 82.8 123 43.1
Psat0s1227g0160 Pisum sativum HOM05D006519 ORTHO05D008306 3.0e-14 82.4 123 42.3
Sed0010209 Sechium edule HOM05D006519 ORTHO05D008306 3.9e-14 82.0 128 44.5
BcaB01g02918 Brassica carinata HOM05D006519 ORTHO05D008306 5.0e-14 81.6 128 39.8
MD14G1186900 Malus domestica HOM05D006519 ORTHO05D008306 5.0e-14 81.6 51 76.5
Glyma.05G033800 Glycine max HOM05D006519 ORTHO05D008306 6.6e-14 81.3 123 43.1
unitig_62.g23572 Utricularia gibba HOM05D006519 ORTHO05D008306 8.6e-14 80.9 135 39.3
AL8G24100 Arabidopsis lyrata HOM05D006519 ORTHO05D008306 2.5e-13 79.3 53 64.2
A03p27660 Brassica napus HOM05D006519 ORTHO05D008306 2.5e-13 79.3 123 42.3
BraA03t11979Z Brassica rapa HOM05D006519 ORTHO05D008306 2.5e-13 79.3 123 42.3
ClCG01G014120 Citrullus lanatus HOM05D006519 ORTHO05D008306 3.3e-13 79.0 129 42.6
Lj4g0003537 Lotus japonicus HOM05D006519 ORTHO05D008306 7.3e-13 77.8 121 41.3
Eucgr.B00339 Eucalyptus grandis HOM05D006519 ORTHO05D008306 9.5e-13 77.4 53 69.8
BcaC01g04830 Brassica carinata HOM05D006519 ORTHO05D008306 1.2e-12 77.0 123 39.8
BolC3t15659H Brassica oleracea HOM05D006519 ORTHO05D008306 1.2e-12 77.0 123 39.8
C03p33370 Brassica napus HOM05D006519 ORTHO05D008306 2.1e-12 76.3 123 39.8
Ca_21889_v3 Cicer arietinum L. HOM05D006519 ORTHO05D008306 1.4e-11 73.6 126 38.9
arahy.Tifrunner.gnm1.ann1.PY279F Arachis hypogaea HOM05D006519 ORTHO05D008306 4.0e-11 72.0 55 65.5
arahy.Tifrunner.gnm1.ann1.RNN7F2 Arachis hypogaea HOM05D006519 ORTHO05D008306 5.2e-11 71.6 55 61.8
arahy.Tifrunner.gnm1.ann1.J4WABN Arachis hypogaea HOM05D006519 ORTHO05D008306 2.6e-10 69.3 55 61.8
arahy.Tifrunner.gnm1.ann1.KZGX7R Arachis hypogaea HOM05D006519 ORTHO05D008306 7.5e-10 67.8 55 60.0
Phvul.003G197000 Phaseolus vulgaris HOM05D006519 ORTHO05D008306 1.7e-09 66.6 51 60.8
arahy.Tifrunner.gnm1.ann1.4TMU9W Arachis hypogaea HOM05D005365 ORTHO05D006910 3.7e-09 65.5 55 56.4
C05p16930 Brassica napus HOM05D006519 ORTHO05D008306 4.9e-09 65.1 53 58.5
ATR0314G030 Amborella trichopoda HOM05D006519 ORTHO05D008306 1.4e-08 63.5 86 47.7
Os06g0239000 Oryza sativa ssp. japonica HOM05D006519 ORTHO05D008306 3.2e-08 62.4 53 58.5
Zm00001eb279990 Zea mays HOM05D006519 ORTHO05D008306 3.2e-08 62.4 56 53.6
SEGI_15669 Sequoiadendron giganteum HOM05D006519 ORTHO05D008306 9.2e-08 60.8 93 43.0
Mapoly0003s0145 Marchantia polymorpha HOM05D006519 ORTHO05D008306 1.2e-07 60.5 88 39.8
AagrBONN_evm.TU.Sc2ySwM_228.2029 Anthoceros agrestis HOM05D006519 ORTHO05D008306 2.1e-07 59.7 92 43.5
HPP92_010835 Vanilla planifolia HOM05D006519 ORTHO05D008306 7.8e-07 57.8 49 57.1
arahy.Tifrunner.gnm1.ann1.MFZI3Y Arachis hypogaea HOM05D005365 ORTHO05D006910 1.0e-06 57.4 55 50.9
CBR_g30328 Chara braunii HOM05D000019 ORTHO05D000048 1.7e-06 56.6 67 47.8
SMO236G0037 Selaginella moellendorffii HOM05D006519 ORTHO05D008306 3.0e-06 55.8 54 50.0
Pp3c21_11830 Physcomitrium patens HOM05D006519 ORTHO05D008306 8.6e-06 54.3 53 43.4


User provided reference genes

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