Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20657 Davidia involucrata HOM05D003929 ORTHO05D004499 1.0e-283 979.5 544 100.0
Dinv02898 Davidia involucrata HOM05D003929 ORTHO05D004499 1.8e-224 782.7 544 82.9
Hma1.2p1_0176F.1_g077430 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 2.5e-194 682.6 540 72.8
CSS0017959 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 2.0e-186 656.4 506 75.9
GSVIVG01007750001 Vitis vinifera HOM05D003929 ORTHO05D004499 2.5e-181 639.4 539 69.0
CiPaw.11G026500 Carya illinoinensis HOM05D003929 ORTHO05D004499 7.2e-181 637.9 544 68.2
TWI14G0242 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 3.8e-174 615.5 540 65.7
QL10p011722 Quercus lobata HOM05D003929 ORTHO05D004499 8.5e-174 614.4 528 67.8
Atru.chr9.2475 Acer truncatum HOM05D003929 ORTHO05D004499 1.1e-173 614.0 540 65.9
Rhsim08G0171800 Rhododendron simsii HOM05D003929 ORTHO05D004499 1.9e-173 613.2 526 70.0
Oeu016382.1 Olea europaea HOM05D003929 ORTHO05D004499 2.0e-170 603.2 547 65.6
Cfa019114 Carpinus fangiana HOM05D003929 ORTHO05D004499 3.3e-170 602.4 568 64.3
Cpa.g.sc770.1 Carica papaya HOM05D003929 ORTHO05D004499 1.6e-167 593.6 542 65.5
TAR374G1605 Trochodendron aralioides HOM05D003929 ORTHO05D004499 3.5e-167 592.4 572 63.3
Prupe.5G174100 Prunus persica HOM05D003929 ORTHO05D004499 6.5e-166 588.2 542 64.4
Nitab4.5_0001017g0080 Nicotiana tabacum HOM05D003929 ORTHO05D004499 8.5e-166 587.8 524 64.5
TAR622G0564 Trochodendron aralioides HOM05D003929 ORTHO05D004499 1.1e-165 587.4 560 62.5
Potri.012G080800 Populus trichocarpa HOM05D003929 ORTHO05D004499 1.5e-165 587.0 540 64.6
Duzib068G1333 Durio zibethinus HOM05D003929 ORTHO05D004499 9.4e-165 584.3 546 65.6
ECA232G3264 Erigeron canadensis HOM05D003929 ORTHO05D004499 4.0e-163 578.9 543 64.8
Duzib205G0135 Durio zibethinus HOM05D003929 ORTHO05D004499 6.8e-163 578.2 545 64.2
Lj5C124G9 Lonicera japonica HOM05D003929 ORTHO05D004499 8.8e-163 577.8 546 66.1
TWI39G0937 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 1.5e-162 577.0 539 64.4
Solyc06g071470.4 Solanum lycopersicum HOM05D003929 ORTHO05D004499 7.5e-162 574.7 535 64.7
PGSC0003DMG400027090 Solanum tuberosum HOM05D003929 ORTHO05D004499 3.7e-161 572.4 535 64.9
Potri.015G076100 Populus trichocarpa HOM05D003929 ORTHO05D004499 1.1e-160 570.9 545 63.7
DCAR_026132 Daucus carota HOM05D003929 ORTHO05D004499 4.1e-160 568.9 543 64.6
Sopen06g027750 Solanum pennellii HOM05D003929 ORTHO05D004499 4.1e-160 568.9 535 64.5
Haze_07467 Corylus avellana HOM05D003929 ORTHO05D004499 9.1e-160 567.8 626 58.0
CiPaw.12G026400 Carya illinoinensis HOM05D003929 ORTHO05D004499 1.2e-159 567.4 544 63.2
CAN.G628.79 Capsicum annuum HOM05D003929 ORTHO05D004499 1.6e-159 567.0 535 62.8
SalBow5G2324 Salvia bowleyana HOM05D003929 ORTHO05D004499 5.9e-159 565.1 562 60.3
MSTRG.11449 Avicennia marina HOM05D003929 ORTHO05D004499 1.3e-158 563.9 540 64.3
Cc04_g14000 Coffea canephora HOM05D003929 ORTHO05D004499 2.3e-158 563.1 543 63.4
TWI31G0970 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 5.0e-158 562.0 539 63.3
Thecc.03G012300 Theobroma cacao HOM05D003929 ORTHO05D004499 1.1e-157 560.8 541 63.0
Peaxi162Scf00017g02914 Petunia axillaris HOM05D003929 ORTHO05D004499 9.5e-157 557.8 536 62.1
vmacro19383 Vaccinium macrocarpon HOM05D003929 ORTHO05D004499 2.1e-156 556.6 520 61.3
Gorai.008G295200 Gossypium raimondii HOM05D003929 ORTHO05D004499 5.7e-154 548.5 546 61.2
Gohir.A12G274000 Gossypium hirsutum HOM05D003929 ORTHO05D004499 1.3e-153 547.4 546 61.4
Manes.14G066000 Manihot esculenta HOM05D003929 ORTHO05D004499 3.7e-153 545.8 543 63.2
FvH4_5g05290 Fragaria vesca HOM05D003929 ORTHO05D004499 3.1e-152 542.7 549 61.0
Gohir.D12G274700 Gossypium hirsutum HOM05D003929 ORTHO05D004499 3.1e-152 542.7 550 60.9
FAN04G3176 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.2e-151 540.8 548 60.6
Manes.06G104600 Manihot esculenta HOM05D003929 ORTHO05D004499 1.6e-151 540.4 525 62.5
FAN13G1321 Fragaria x ananassa HOM05D003929 ORTHO05D004499 2.0e-151 540.0 548 60.8
HanXRQChr16g0504021 Helianthus annuus HOM05D003929 ORTHO05D004499 2.0e-151 540.0 540 63.3
FAN18G3765 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.0e-150 537.7 549 60.7
CAN.G781.12 Capsicum annuum HOM05D003929 ORTHO05D004499 2.3e-150 536.6 520 59.4
Hma1.2p1_0000F.1_g000890 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 3.9e-150 535.8 519 63.2
FAN18G3294 Fragaria x ananassa HOM05D003929 ORTHO05D004499 5.0e-150 535.4 549 59.6
RcHm_v2.0_Chr7g0193581 Rosa chinensis HOM05D003929 ORTHO05D004499 6.6e-150 535.0 555 60.0
Eucgr.B00317 Eucalyptus grandis HOM05D003929 ORTHO05D004499 3.3e-149 532.7 518 60.0
CANSAT80G0843 Cannabis sativa HOM05D003929 ORTHO05D004499 1.0e-147 527.7 544 60.7
MD14G1180600 Malus domestica HOM05D003929 ORTHO05D004499 6.8e-147 525.0 500 62.0
Lalb_Chr13g0297821 Lupinus albus HOM05D003929 ORTHO05D004499 7.0e-144 515.0 540 58.0
Nitab4.5_0009783g0030 Nicotiana tabacum HOM05D003929 ORTHO05D004499 2.0e-143 513.5 517 58.0
Peaxi162Scf00689g00222 Petunia axillaris HOM05D003929 ORTHO05D004499 5.0e-142 508.8 530 56.8
MD06G1174100 Malus domestica HOM05D003929 ORTHO05D004499 1.1e-141 507.7 503 61.2
Lsat_1_v5_gn_4_75281 Lactuca sativa HOM05D003929 ORTHO05D004499 9.5e-141 504.6 539 61.0
Migut.I00015 Erythranthe guttata HOM05D003929 ORTHO05D004499 2.8e-140 503.1 552 60.3
Lj4g0023186 Lotus japonicus HOM05D003929 ORTHO05D004499 1.1e-139 501.1 543 58.9
PGR083G1389 Punica granatum HOM05D003929 ORTHO05D004499 5.8e-138 495.4 534 58.4
TPR.G37553 Trifolium pratense HOM05D003929 ORTHO05D004499 9.8e-138 494.6 537 54.9
Aqoxy3G02955 Aquilegia oxysepala HOM05D003929 ORTHO05D004499 2.2e-137 493.4 537 57.2
Phvul.003G200200 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 2.2e-137 493.4 541 56.4
Hund09434 Selenicereus undatus HOM05D003929 ORTHO05D004499 1.2e-135 487.6 546 57.9
FAN08G2589 Fragaria x ananassa HOM05D003929 ORTHO05D004499 4.6e-135 485.7 550 56.9
Nn1g01975 Nelumbo nucifera HOM05D003929 ORTHO05D004499 4.6e-135 485.7 552 56.0
ClCG06G017000 Citrullus lanatus HOM05D003929 ORTHO05D004499 6.6e-134 481.9 544 57.9
Glyma.06G182600 Glycine max HOM05D003929 ORTHO05D004499 1.2e-132 477.6 544 54.0
Actinidia19318 Actinidia chinensis HOM05D003929 ORTHO05D004499 2.1e-132 476.9 426 68.1
Glyma.17G089700 Glycine max HOM05D003929 ORTHO05D004499 2.8e-132 476.5 540 55.9
Sed0022246 Sechium edule HOM05D003929 ORTHO05D004499 4.7e-132 475.7 547 55.9
PSO063G6021 Papaver somniferum HOM05D003929 ORTHO05D004499 1.8e-131 473.8 544 54.8
EL10Ac5g10751 Beta vulgaris HOM05D003929 ORTHO05D004499 1.5e-130 470.7 549 55.4
Medtr4g106880 Medicago truncatula HOM05D003929 ORTHO05D004499 1.5e-130 470.7 521 57.2
Nitab4.5_0007719g0020 Nicotiana tabacum HOM05D003929 ORTHO05D004499 2.6e-130 469.9 535 54.8
VMungo1309G0717 Vigna mungo HOM05D003929 ORTHO05D004499 6.4e-129 465.3 544 51.7
VMungo1215G1851 Vigna mungo HOM05D003929 ORTHO05D004499 8.3e-129 464.9 541 55.1
Phvul.009G178800 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 7.1e-128 461.8 546 52.0
Glyma.05G037400 Glycine max HOM05D003929 ORTHO05D004499 6.0e-127 458.8 547 52.5
CsaV3_1G001520 Cucumis sativus L. HOM05D003929 ORTHO05D004499 3.0e-126 456.4 541 55.1
SalBow5G2758 Salvia bowleyana HOM05D003929 ORTHO05D004499 3.0e-126 456.4 561 51.2
Ca_21916_v3 Cicer arietinum L. HOM05D003929 ORTHO05D004499 1.5e-125 454.1 508 55.5
MELO3C026291.2 Cucumis melo HOM05D003929 ORTHO05D004499 1.5e-125 454.1 543 55.2
Solyc03g114330.3 Solanum lycopersicum HOM05D003929 ORTHO05D004499 2.1e-124 450.3 525 52.4
Ciclev10024320m.g Citrus clementina HOM05D003929 ORTHO05D004499 1.2e-122 444.5 431 65.4
arahy.Tifrunner.gnm1.ann1.S02CG0 Arachis hypogaea HOM05D003929 ORTHO05D004499 2.4e-120 436.8 546 49.5
arahy.Tifrunner.gnm1.ann1.R24CC5 Arachis hypogaea HOM05D003929 ORTHO05D004499 5.4e-120 435.6 545 49.5
Actinidia33066 Actinidia chinensis HOM05D003929 ORTHO05D004499 7.1e-120 435.3 453 62.3
Nitab4.5_0000003g0590 Nicotiana tabacum HOM05D003929 ORTHO05D004499 1.6e-119 434.1 524 50.8
Ah.11g051630 Amaranthus hybridus HOM05D003618 ORTHO05D004302 6.6e-118 428.7 549 51.2
SGA_v2.0_scaffold90G27941 Striga asiatica HOM05D003929 ORTHO05D004499 1.9e-117 427.2 557 53.5
Lj1g0005514 Lotus japonicus HOM05D003929 ORTHO05D004499 1.3e-116 424.5 519 52.2
PSO832G4520 Papaver somniferum HOM05D003929 ORTHO05D004499 1.3e-116 424.5 537 51.6
PGR044G0511 Punica granatum HOM05D003929 ORTHO05D004499 1.4e-115 421.0 532 53.0
COL.COLO4_30035 Corchorus olitorius HOM05D003929 ORTHO05D004499 4.0e-115 419.5 543 50.8
THA.LOC104821459 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 9.0e-115 418.3 540 52.2
AL8G39770 Arabidopsis lyrata HOM05D003929 ORTHO05D004499 2.0e-114 417.2 559 48.7
THA.LOC104818232 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 2.6e-114 416.8 554 51.1
MBI10_g41915_MAGBIO Magnolia biondii HOM05D003929 ORTHO05D004499 7.6e-114 415.2 542 52.4
arahy.Tifrunner.gnm1.ann1.W2DQVT Arachis hypogaea HOM05D003929 ORTHO05D004499 2.2e-113 413.7 573 50.6
Lalb_Chr07g0182721 Lupinus albus HOM05D003929 ORTHO05D004499 3.8e-113 412.9 539 50.8
Carub.0008s2353 Capsella rubella HOM05D003929 ORTHO05D004499 4.9e-113 412.5 559 48.5
Lalb_Chr11g0071231 Lupinus albus HOM05D003929 ORTHO05D004499 4.2e-112 409.5 543 48.4
BcaC01g02523 Brassica carinata HOM05D003929 ORTHO05D004499 1.2e-111 407.9 564 48.0
Aa31LG11G880 Aethionema arabicum HOM05D003929 ORTHO05D004499 4.6e-111 406.0 550 48.9
BolC3t18647H Brassica oleracea HOM05D003929 ORTHO05D004499 4.6e-111 406.0 566 48.1
C03p63930 Brassica napus HOM05D003929 ORTHO05D004499 7.8e-111 405.2 564 48.0
AT5G62810 Arabidopsis thaliana HOM05D003929 ORTHO05D004499 2.3e-110 403.7 555 48.3
Thhalv10004017m.g Eutrema salsugineum HOM05D003929 ORTHO05D004499 8.7e-110 401.7 555 47.9
BcaB02g09694 Brassica carinata HOM05D003929 ORTHO05D004499 2.5e-109 400.2 517 49.1
BraA06t25903Z Brassica rapa HOM05D003929 ORTHO05D004499 4.3e-109 399.4 552 47.6
A06p29570 Brassica napus HOM05D003929 ORTHO05D004499 9.6e-109 398.3 563 47.1
Sopen03g033430 Solanum pennellii HOM05D003929 ORTHO05D004499 1.3e-108 397.9 525 48.6
CARHR276590 Cardamine hirsuta HOM05D003929 ORTHO05D004499 3.6e-108 396.4 555 47.2
Sp2g25960 Schrenkiella parvula HOM05D003929 ORTHO05D004499 1.4e-107 394.4 557 47.9
BraA09t36437Z Brassica rapa HOM05D003929 ORTHO05D004499 2.2e-105 387.1 516 48.1
A09p07860 Brassica napus HOM05D003929 ORTHO05D004499 1.1e-104 384.8 523 47.2
Migut.D01928 Erythranthe guttata HOM05D003929 ORTHO05D004499 1.4e-104 384.4 529 49.1
Sc04g0001820 Simmondsia chinensis HOM05D003929 ORTHO05D004499 2.4e-104 383.6 385 60.8
BolC9t53798H Brassica oleracea HOM05D003929 ORTHO05D004499 4.2e-104 382.9 553 46.8
C09p08860 Brassica napus HOM05D003929 ORTHO05D004499 1.6e-103 380.9 549 46.4
BcaC04g23392 Brassica carinata HOM05D003929 ORTHO05D004499 2.1e-103 380.6 553 46.3
Psat4g057880 Pisum sativum HOM05D003929 ORTHO05D004499 1.0e-102 378.3 386 57.3
AUR62030967 Chenopodium quinoa HOM05D003929 ORTHO05D004499 5.3e-99 365.9 568 48.4
Sed0009068 Sechium edule HOM05D003929 ORTHO05D004499 4.9e-97 359.4 386 59.1
Oeu024692.2 Olea europaea HOM05D003929 ORTHO05D004499 1.6e-92 344.4 310 69.4
ATR0730G040 Amborella trichopoda HOM05D003929 ORTHO05D004499 5.5e-88 329.3 515 47.4
CSS0023375 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 1.3e-86 324.7 253 78.3
CDE11G0983 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 3.0e-86 323.6 519 44.9
CDE05G2632 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 1.5e-85 321.2 541 43.8
Oeu022163.1 Olea europaea HOM05D003929 ORTHO05D004499 2.5e-85 320.5 284 65.1
AUR62008214 Chenopodium quinoa HOM05D003929 ORTHO05D004499 3.1e-83 313.5 516 44.4
Atru.chr11.2035 Acer truncatum HOM05D003929 ORTHO05D004499 1.0e-81 308.5 455 45.1
HPP92_021833 Vanilla planifolia HOM05D003929 ORTHO05D004499 9.4e-80 302.0 398 49.7
Lj9A449T48 Lonicera japonica HOM05D003929 ORTHO05D004499 3.9e-78 296.6 236 69.9
SEGI_11105 Sequoiadendron giganteum HOM05D003929 ORTHO05D004499 1.3e-76 291.6 633 38.4
unitig_749.g13474 Utricularia gibba HOM05D003929 ORTHO05D004499 2.1e-71 274.2 429 40.3
Thecc.02G250700 Theobroma cacao HOM05D003929 ORTHO05D004499 2.4e-59 234.2 397 40.3
Psat4g209200 Pisum sativum HOM05D003929 ORTHO05D004499 4.5e-58 229.9 342 46.8
COL.COLO4_24172 Corchorus olitorius HOM05D003929 ORTHO05D004499 8.5e-57 225.7 392 40.6
Cfa019127 Carpinus fangiana HOM05D003929 ORTHO05D004499 1.9e-56 224.6 187 67.4
Hund02741 Selenicereus undatus HOM05D003929 ORTHO05D004499 9.4e-56 222.2 473 36.6
Gohir.A03G139300 Gossypium hirsutum HOM05D003929 ORTHO05D004499 4.7e-55 219.9 416 38.7
Gohir.D02G162200 Gossypium hirsutum HOM05D003929 ORTHO05D004499 2.0e-53 214.5 413 38.7
Zm00001eb267680 Zea mays HOM05D003929 ORTHO05D004499 5.7e-53 213.0 531 33.7
Zm00001eb356320 Zea mays HOM05D003929 ORTHO05D004499 5.7e-53 213.0 549 33.7
Gorai.005G182200 Gossypium raimondii HOM05D003929 ORTHO05D004499 9.8e-53 212.2 414 38.4
arahy.Tifrunner.gnm1.ann1.49JIZL Arachis hypogaea HOM05D003929 ORTHO05D004499 8.0e-47 192.6 240 51.7
Os05g0101200 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 9.5e-40 169.1 556 31.7
HanXRQChr16g0526511 Helianthus annuus HOM05D004647 ORTHO05D005349 8.9e-38 162.5 199 59.8
FAN24G3310 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.7e-33 148.3 285 40.7
PSO135G0191 Papaver somniferum HOM05D003929 ORTHO05D004499 5.0e-33 146.7 195 48.2
Mapoly0102s0017 Marchantia polymorpha HOM05D003929 ORTHO05D004499 3.3e-32 144.1 534 31.8
Zm00001eb126680 Zea mays HOM05D003929 ORTHO05D004499 1.6e-31 141.7 499 29.7
Os01g0107000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 1.4e-30 138.7 199 41.2
PGR044G1312 Punica granatum HOM05D003929 ORTHO05D004499 6.8e-30 136.3 196 43.4
Lj9A449G50 Lonicera japonica HOM05D003929 ORTHO05D004499 2.6e-29 134.4 128 62.5
Pp3c9_20380 Physcomitrium patens HOM05D003929 ORTHO05D004499 3.2e-27 127.5 241 38.6
Actinidia19319 Actinidia chinensis HOM05D003618 ORTHO05D004302 9.2e-27 125.9 275 45.1
Pp3c15_21860 Physcomitrium patens HOM05D003929 ORTHO05D004499 3.0e-25 120.9 220 40.5
SHI17029 Sapria himalayana HOM05D003929 ORTHO05D004499 8.6e-25 119.4 143 49.7
AagrBONN_evm.TU.Sc2ySwM_117.2261 Anthoceros agrestis HOM05D003929 ORTHO05D004499 3.3e-24 117.5 189 40.7
CBR_g3508 Chara braunii HOM05D003929 ORTHO05D004499 5.6e-24 116.7 313 32.3
PGSC0003DMG400024502 Solanum tuberosum HOM05D003929 ORTHO05D004499 2.3e-22 111.3 108 62.0
Nitab4.5_0000866g0190 Nicotiana tabacum HOM05D003929 ORTHO05D004499 7.5e-21 106.3 123 52.8
ClCG01G013120 Citrullus lanatus HOM05D003929 ORTHO05D004499 6.0e-18 96.7 139 39.6
SHI17030 Sapria himalayana HOM05D003929 ORTHO05D004499 5.1e-17 93.6 102 52.0
CBR_g10793 Chara braunii HOM05D027206 ORTHO05D004499 2.9e-12 77.8 70 58.6
Os05g0578000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 1.4e-11 75.5 112 42.0
CBR_g3506 Chara braunii HOM05D003929 ORTHO05D004499 1.7e-09 68.6 71 47.9
MCO04G191 Micromonas commoda HOM05D003929 ORTHO05D004499 5.1e-09 67.0 83 44.6
Cre10.g454025 Chlamydomonas reinhardtii HOM05D003929 ORTHO05D004499 1.5e-08 65.5 135 40.0
Zm00001eb296750 Zea mays HOM05D003929 ORTHO05D004499 2.1e-07 61.6 111 40.5
SHI17025 Sapria himalayana HOM05D003929 ORTHO05D004499 3.6e-07 60.8 44 65.9


User provided reference genes

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