Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20638 Davidia involucrata HOM05D000922 ORTHO05D007418 4.5e-292 1007.3 543 100.0
Hma1.2p1_2469F.1_g322680 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 1.9e-117 427.2 844 36.5
CSS0017974 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D007418 2.4e-112 410.2 845 36.3
Hma1.2p1_2165F.1_g315780 Hydrangea macrophylla HOM05D000922 ORTHO05D007418 5.4e-112 409.1 843 35.8
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 6.7e-94 349.0 846 32.4
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 2.4e-91 340.5 748 35.3
TAR622G0946 Trochodendron aralioides HOM05D000922 ORTHO05D007418 6.5e-89 332.4 843 32.0
vmacro19399 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 1.6e-87 327.8 228 72.4
Dinv38573 Davidia involucrata HOM05D000922 ORTHO05D007418 3.5e-87 326.6 287 70.7
GSVIVG01007724001 Vitis vinifera HOM05D000922 ORTHO05D007418 1.0e-86 325.1 823 33.3
Lj9A446G57 Lonicera japonica HOM05D000922 ORTHO05D007418 2.8e-84 317.0 228 73.2
MD06G1172500 Malus domestica HOM05D000922 ORTHO05D007418 4.8e-84 316.2 228 72.8
Nn4g22714 Nelumbo nucifera HOM05D000922 ORTHO05D007418 8.2e-84 315.5 228 69.3
Atru.chr9.2494 Acer truncatum HOM05D000922 ORTHO05D007418 1.8e-83 314.3 228 72.4
Prupe.5G171800 Prunus persica HOM05D000922 ORTHO05D007418 1.8e-83 314.3 228 71.9
Cfa019149 Carpinus fangiana HOM05D000922 ORTHO05D007418 4.1e-83 313.2 227 68.7
DCAR_016480 Daucus carota HOM05D000922 ORTHO05D007418 2.6e-82 310.5 228 69.3
MD14G1178400 Malus domestica HOM05D000922 ORTHO05D007418 5.9e-82 309.3 228 70.6
Manes.14G064400 Manihot esculenta HOM05D000922 ORTHO05D007418 5.9e-82 309.3 227 69.2
QL10p011002 Quercus lobata HOM05D000922 ORTHO05D007418 1.3e-81 308.1 226 70.8
CiPaw.11G024700 Carya illinoinensis HOM05D000922 ORTHO05D007418 1.1e-80 305.1 227 69.2
Haze_07516 Corylus avellana HOM05D000922 ORTHO05D007418 1.1e-80 305.1 255 62.7
Thecc.03G014400 Theobroma cacao HOM05D000922 ORTHO05D007418 3.2e-80 303.5 228 68.0
FvH4_5g05470 Fragaria vesca HOM05D000922 ORTHO05D007418 2.1e-79 300.8 227 68.7
Potri.015G078300 Populus trichocarpa HOM05D000922 ORTHO05D007418 6.1e-79 299.3 227 68.7
CANSAT80G2096 Cannabis sativa HOM05D000922 ORTHO05D007418 1.0e-78 298.5 229 68.6
FAN13G2825 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.3e-78 298.1 227 68.7
FAN18G1332 Fragaria x ananassa HOM05D000922 ORTHO05D007418 1.8e-78 297.7 228 68.9
FAN08G1289 Fragaria x ananassa HOM05D000922 ORTHO05D007418 2.3e-78 297.4 228 68.9
Lj1g0015886 Lotus japonicus HOM05D000922 ORTHO05D007418 2.3e-78 297.4 228 66.7
Sabra12G0059200 Salix brachista HOM05D000922 ORTHO05D007418 2.3e-78 297.4 227 68.7
Glyma.06G181100 Glycine max HOM05D000922 ORTHO05D007418 3.0e-78 297.0 225 67.1
Potri.012G082500 Populus trichocarpa HOM05D000922 ORTHO05D007418 3.0e-78 297.0 227 69.6
Sabra15G0102900 Salix brachista HOM05D000922 ORTHO05D007418 3.9e-78 296.6 227 68.3
FAN04G3074 Fragaria x ananassa HOM05D000922 ORTHO05D007418 5.1e-78 296.2 228 68.4
Glyma.04G184600 Glycine max HOM05D000922 ORTHO05D007418 5.1e-78 296.2 229 66.4
RcHm_v2.0_Chr7g0193371 Rosa chinensis HOM05D000922 ORTHO05D007418 6.7e-78 295.8 228 68.4
VMungo1309G1607 Vigna mungo HOM05D000922 ORTHO05D007418 6.7e-78 295.8 228 65.8
Cpa.g.sc2974.2 Carica papaya HOM05D000922 ORTHO05D007418 8.7e-78 295.4 228 68.0
Duzib205G1607 Durio zibethinus HOM05D000922 ORTHO05D007418 1.5e-77 294.7 227 67.8
Phvul.009G177300 Phaseolus vulgaris HOM05D000922 ORTHO05D007418 1.3e-76 291.6 231 64.5
Ciclev10018588m.g Citrus clementina HOM05D000922 ORTHO05D007418 4.8e-76 289.7 228 66.7
Cc04_g12110 Coffea canephora HOM05D000922 ORTHO05D007418 4.8e-76 289.7 232 67.2
Medtr3g077620 Medicago truncatula HOM05D000922 ORTHO05D007418 4.8e-76 289.7 227 65.2
PSO017G6576 Papaver somniferum HOM05D000922 ORTHO05D007418 5.3e-75 286.2 232 61.6
PSO478G1387 Papaver somniferum HOM05D000922 ORTHO05D007418 5.3e-75 286.2 232 61.6
Gohir.D12G275700 Gossypium hirsutum HOM05D000922 ORTHO05D007418 9.0e-75 285.4 229 66.4
Gorai.008G296200 Gossypium raimondii HOM05D000922 ORTHO05D007418 9.0e-75 285.4 229 66.4
Aqoxy3G02884 Aquilegia oxysepala HOM05D000922 ORTHO05D007418 2.6e-74 283.9 225 64.4
TPR.G20687 Trifolium pratense HOM05D000922 ORTHO05D007418 2.6e-74 283.9 229 64.6
CAN.G1166.3 Capsicum annuum HOM05D000922 ORTHO05D007418 5.9e-74 282.7 232 63.8
Eucgr.B00297 Eucalyptus grandis HOM05D000922 ORTHO05D007418 5.9e-74 282.7 229 66.4
arahy.Tifrunner.gnm1.ann1.F0ZNJX Arachis hypogaea HOM05D000922 ORTHO05D007418 1.0e-73 282.0 230 65.2
Lalb_Chr23g0273281 Lupinus albus HOM05D000922 ORTHO05D007418 1.0e-73 282.0 228 63.6
Peaxi162Scf00255g01019 Petunia axillaris HOM05D000922 ORTHO05D007418 1.0e-73 282.0 232 62.5
arahy.Tifrunner.gnm1.ann1.9TFG5W Arachis hypogaea HOM05D000922 ORTHO05D007418 1.7e-73 281.2 230 65.2
EL10Ac5g10730 Beta vulgaris HOM05D000922 ORTHO05D007418 2.9e-73 280.4 228 63.6
Ca_16166_v3 Cicer arietinum L. HOM05D000922 ORTHO05D007418 3.8e-73 280.0 228 62.3
Sc04g0001750 Simmondsia chinensis HOM05D000922 ORTHO05D007418 5.0e-73 279.6 229 65.1
Migut.O00098 Erythranthe guttata HOM05D000922 ORTHO05D007418 1.4e-72 278.1 230 63.9
ClCG06G017060 Citrullus lanatus HOM05D000922 ORTHO05D007418 2.5e-72 277.3 229 64.2
Peaxi162Scf00089g01840 Petunia axillaris HOM05D000922 ORTHO05D007418 9.4e-72 275.4 232 62.5
Sopen03g031910 Solanum pennellii HOM05D000922 ORTHO05D007418 2.1e-71 274.2 232 61.6
FAN18G2587 Fragaria x ananassa HOM05D000922 ORTHO05D007418 3.6e-71 273.5 258 59.7
HanXRQChr05g0155771 Helianthus annuus HOM05D000922 ORTHO05D007418 1.4e-70 271.6 228 63.6
Nitab4.5_0001514g0050 Nicotiana tabacum HOM05D000922 ORTHO05D007418 3.0e-70 270.4 232 61.6
Psat0ss3962g0400 Pisum sativum HOM05D000922 ORTHO05D007418 3.0e-70 270.4 227 63.4
Solyc03g112830.4 Solanum lycopersicum HOM05D000922 ORTHO05D007418 3.9e-70 270.0 232 62.1
TWI23G1000 Tripterygium wilfordii HOM05D000922 ORTHO05D007418 5.1e-70 269.6 208 68.8
PGR083G1532 Punica granatum HOM05D000922 ORTHO05D007418 6.7e-70 269.2 228 61.4
ECA246G4214 Erigeron canadensis HOM05D000922 ORTHO05D007418 3.3e-69 266.9 225 61.3
AUR62008194 Chenopodium quinoa HOM05D000922 ORTHO05D007418 7.4e-69 265.8 227 63.0
Sed0021678 Sechium edule HOM05D000922 ORTHO05D007418 7.4e-69 265.8 227 61.7
Lsat_1_v5_gn_5_15041 Lactuca sativa HOM05D000922 ORTHO05D007418 1.7e-68 264.6 214 61.2
AUR62030946 Chenopodium quinoa HOM05D000922 ORTHO05D007418 2.8e-68 263.8 227 63.0
Duzib068G1349 Durio zibethinus HOM05D000922 ORTHO05D007418 5.3e-67 259.6 232 61.6
MSTRG.23139 Avicennia marina HOM05D000922 ORTHO05D007418 6.9e-67 259.2 232 59.9
Ah.02g110580 Amaranthus hybridus HOM05D000922 ORTHO05D007418 3.4e-66 256.9 228 60.1
BcaC09g49852 Brassica carinata HOM05D000922 ORTHO05D007418 5.9e-66 256.1 229 57.6
SGA_v2.0_scaffold90G27900 Striga asiatica HOM05D000922 ORTHO05D007418 1.0e-65 255.4 232 57.3
BcaB05g22925 Brassica carinata HOM05D000922 ORTHO05D007418 2.2e-65 254.2 229 57.2
BolC1t03155H Brassica oleracea HOM05D000922 ORTHO05D007418 2.5e-64 250.8 230 57.0
Os01g0549500 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D007418 2.5e-64 250.8 227 58.1
Carub.0005s1432 Capsella rubella HOM05D000922 ORTHO05D007418 4.2e-64 250.0 230 57.8
ATR1091G081 Amborella trichopoda HOM05D000922 ORTHO05D007418 5.5e-64 249.6 229 58.5
BraA01t02462Z Brassica rapa HOM05D000922 ORTHO05D007418 5.5e-64 249.6 230 57.0
AL5G27540 Arabidopsis lyrata HOM05D000922 ORTHO05D007418 1.2e-63 248.4 230 58.3
AT3G48195 Arabidopsis thaliana HOM05D000922 ORTHO05D007418 1.2e-63 248.4 230 57.4
A01p25510 Brassica napus HOM05D000922 ORTHO05D007418 2.1e-63 247.7 230 56.5
Sp5g13830 Schrenkiella parvula HOM05D000922 ORTHO05D007418 2.1e-63 247.7 229 56.8
CARHR156940 Cardamine hirsuta HOM05D000922 ORTHO05D007418 2.7e-63 247.3 229 56.3
Aa31LG4G16800 Aethionema arabicum HOM05D000922 ORTHO05D007418 3.6e-63 246.9 230 58.7
Thhalv10010097m.g Eutrema salsugineum HOM05D000922 ORTHO05D007418 3.0e-62 243.8 230 57.0
Hund02754 Selenicereus undatus HOM05D000922 ORTHO05D007418 5.1e-62 243.0 230 59.6
MELO3C017091.2 Cucumis melo HOM05D000922 ORTHO05D007418 6.3e-60 236.1 243 56.0
unitig_26.g9619 Utricularia gibba HOM05D000922 ORTHO05D007418 2.7e-55 220.7 233 51.1
CDE06G1806 Ceratophyllum demersum HOM05D000922 ORTHO05D007418 4.7e-55 219.9 194 57.7
HPP92_009707 Vanilla planifolia HOM05D000922 ORTHO05D007418 3.0e-54 217.2 151 66.2
SHI17077 Sapria himalayana HOM05D000922 ORTHO05D007418 2.1e-47 194.5 166 59.0
THA.LOC104798972 Tarenaya hassleriana HOM05D000922 ORTHO05D007418 8.0e-47 192.6 124 76.6
SalBow5G1735 Salvia bowleyana HOM05D000922 ORTHO05D007418 1.5e-45 188.3 124 75.0
SalBow5G3118 Salvia bowleyana HOM05D000922 ORTHO05D007418 1.5e-45 188.3 124 75.0
Oeu016401.1 Olea europaea HOM05D000922 ORTHO05D007418 3.4e-45 187.2 124 75.0
Actinidia19330 Actinidia chinensis HOM05D000922 ORTHO05D007418 9.1e-43 179.1 287 41.5
Mapoly0023s0026 Marchantia polymorpha HOM05D000922 ORTHO05D007418 1.2e-39 168.7 150 54.7
Pp3c26_1280 Physcomitrium patens HOM05D000922 ORTHO05D007418 4.7e-39 166.8 195 45.6
vmacro19400 Vaccinium macrocarpon HOM05D000922 ORTHO05D007418 8.0e-39 166.0 289 39.4
SMO367G0209 Selaginella moellendorffii HOM05D000922 ORTHO05D007418 1.7e-36 158.3 149 48.3
SEGI_24933 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 3.4e-29 134.0 189 38.1
Actinidia33077 Actinidia chinensis HOM05D000922 ORTHO05D007418 4.1e-27 127.1 125 56.0
Zm00001eb162380 Zea mays HOM05D000922 ORTHO05D007418 1.1e-24 119.0 76 76.3
Actinidia33076 Actinidia chinensis HOM05D000922 ORTHO05D007418 1.0e-22 112.5 185 42.7
SEGI_19196 Sequoiadendron giganteum HOM05D000922 ORTHO05D007418 1.1e-19 102.4 76 64.5
Gohir.A12G275000 Gossypium hirsutum HOM05D000922 ORTHO05D007418 2.4e-19 101.3 64 78.1
Psat4g066520 Pisum sativum HOM05D001026 ORTHO05D007418 1.3e-17 95.5 103 53.4
Peaxi162Scf00009g02111 Petunia axillaris HOM05D000861 ORTHO05D007418 1.6e-15 88.6 86 53.5
Peaxi162Scf00470g00024 Petunia axillaris HOM05D000861 ORTHO05D007418 2.1e-15 88.2 81 56.8
Peaxi162Scf00397g00009 Petunia axillaris HOM05D000922 ORTHO05D015732 3.6e-15 87.4 58 69.0
Nitab4.5_0000025g0520 Nicotiana tabacum HOM05D000922 ORTHO05D007418 1.8e-14 85.1 109 44.0
Peaxi162Scf01130g00212 Petunia axillaris HOM05D000861 ORTHO05D007418 1.8e-14 85.1 51 78.4
Peaxi162Scf00304g01332 Petunia axillaris HOM05D000922 ORTHO05D007418 2.6e-13 81.3 55 69.1
CAN.G1651.1 Capsicum annuum HOM05D003439 ORTHO05D000484 7.5e-13 79.7 67 61.2
Cpa.g.sc2974.1 Carica papaya HOM05D000922 ORTHO05D007418 6.4e-12 76.6 150 32.7
Cfa000646 Carpinus fangiana HOM05D000922 ORTHO05D007418 5.4e-11 73.6 155 37.4
Lalb_Chr23g0273291 Lupinus albus HOM05D000922 ORTHO05D007418 1.0e-09 69.3 281 24.6
COL.COLO4_30068 Corchorus olitorius HOM05D000922 ORTHO05D007418 1.5e-08 65.5 294 24.1


User provided reference genes

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