Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20629 Davidia involucrata HOM05D004430 ORTHO05D005088 0.0e+00 3033.0 1593 100.0
Dinv38562 Davidia involucrata HOM05D004430 ORTHO05D005088 0.0e+00 2132.8 1699 71.2
CSS0010843 Camellia sinensis var. sinensis HOM05D004430 ORTHO05D005088 0.0e+00 1684.1 1610 63.7
Atru.chr9.2519 Acer truncatum HOM05D004430 ORTHO05D005088 0.0e+00 1461.0 1673 54.0
Thecc.03G018800 Theobroma cacao HOM05D004430 ORTHO05D005088 0.0e+00 1454.1 1607 55.9
GSVIVG01007703001 Vitis vinifera HOM05D004430 ORTHO05D005088 0.0e+00 1449.1 1606 54.2
Lj9C446G12 Lonicera japonica HOM05D004430 ORTHO05D005088 0.0e+00 1418.3 1621 55.5
vmacro19413 Vaccinium macrocarpon HOM05D004430 ORTHO05D005088 0.0e+00 1414.4 1626 55.4
QL10p008934 Quercus lobata HOM05D004430 ORTHO05D005088 0.0e+00 1395.9 1622 53.5
Rhsim08G0174600 Rhododendron simsii HOM05D004430 ORTHO05D005088 0.0e+00 1343.2 1617 55.8
Prupe.5G170400 Prunus persica HOM05D004430 ORTHO05D005088 0.0e+00 1340.5 1707 50.8
MD06G1170800 Malus domestica HOM05D004430 ORTHO05D005088 0.0e+00 1337.0 1622 52.1
Duzib084G1065 Durio zibethinus HOM05D004430 ORTHO05D005088 0.0e+00 1334.3 1621 51.8
Gohir.D02G117900 Gossypium hirsutum HOM05D004430 ORTHO05D005088 0.0e+00 1333.5 1627 52.8
COL.COLO4_30100 Corchorus olitorius HOM05D004430 ORTHO05D005088 0.0e+00 1333.2 1628 51.8
Gorai.005G135600 Gossypium raimondii HOM05D004430 ORTHO05D005088 0.0e+00 1332.0 1627 52.9
RcHm_v2.0_Chr7g0193171 Rosa chinensis HOM05D004430 ORTHO05D005088 0.0e+00 1323.1 1622 52.0
Potri.012G088500 Populus trichocarpa HOM05D004430 ORTHO05D005088 0.0e+00 1321.2 1617 51.0
Potri.015G079800 Populus trichocarpa HOM05D004430 ORTHO05D005088 0.0e+00 1319.7 1616 51.6
Gohir.A03G089900 Gossypium hirsutum HOM05D004430 ORTHO05D005088 0.0e+00 1317.4 1626 52.2
TAR374G1038 Trochodendron aralioides HOM05D004430 ORTHO05D005088 0.0e+00 1313.1 1650 52.4
Duzib205G1695 Durio zibethinus HOM05D004430 ORTHO05D005088 0.0e+00 1300.0 1622 52.0
MD14G1176500 Malus domestica HOM05D004430 ORTHO05D005088 0.0e+00 1276.2 1625 51.4
Sabra15G0104100 Salix brachista HOM05D004430 ORTHO05D005088 0.0e+00 1257.7 1612 49.8
FvH4_5g05640 Fragaria vesca HOM05D004430 ORTHO05D005088 0.0e+00 1256.1 1625 50.6
Lj4g0003819 Lotus japonicus HOM05D004430 ORTHO05D005088 0.0e+00 1250.0 1618 50.3
Sabra12G0063700 Salix brachista HOM05D004430 ORTHO05D005088 0.0e+00 1246.9 1654 48.4
Duzib068G0887 Durio zibethinus HOM05D004430 ORTHO05D005088 0.0e+00 1237.2 1619 49.9
FAN13G0016 Fragaria x ananassa HOM05D004430 ORTHO05D005088 0.0e+00 1227.6 1623 49.7
TWI39G0976 Tripterygium wilfordii HOM05D004430 ORTHO05D005088 0.0e+00 1223.0 1630 50.1
FAN08G1542 Fragaria x ananassa HOM05D004430 ORTHO05D005088 0.0e+00 1214.9 1633 49.4
Lalb_Chr12g0201701 Lupinus albus HOM05D004430 ORTHO05D005088 0.0e+00 1207.6 1625 49.2
FAN18G2048 Fragaria x ananassa HOM05D004430 ORTHO05D005088 0.0e+00 1205.7 1617 49.6
FAN18G1146 Fragaria x ananassa HOM05D004430 ORTHO05D005088 0.0e+00 1204.9 1623 49.5
Glyma.17G087600 Glycine max HOM05D004430 ORTHO05D005088 0.0e+00 1194.5 1614 49.1
Manes.06G107200 Manihot esculenta HOM05D004430 ORTHO05D005088 0.0e+00 1191.4 1680 47.5
arahy.Tifrunner.gnm1.ann1.FBBL0Z Arachis hypogaea HOM05D004430 ORTHO05D005088 0.0e+00 1185.6 1615 48.1
Nitab4.5_0003229g0080 Nicotiana tabacum HOM05D004430 ORTHO05D005088 0.0e+00 1173.7 1618 48.6
Nitab4.5_0001207g0060 Nicotiana tabacum HOM05D004430 ORTHO05D005088 0.0e+00 1172.9 1649 48.0
FAN04G2171 Fragaria x ananassa HOM05D004430 ORTHO05D005088 0.0e+00 1171.0 1629 48.3
TWI14G0761 Tripterygium wilfordii HOM05D004430 ORTHO05D005088 0.0e+00 1166.8 1634 48.1
Manes.06G107300 Manihot esculenta HOM05D004430 ORTHO05D005088 0.0e+00 1160.6 1671 47.0
Sopen03g031740 Solanum pennellii HOM05D004430 ORTHO05D005088 0.0e+00 1157.9 1623 47.9
Glyma.05G039400 Glycine max HOM05D004430 ORTHO05D005088 0.0e+00 1156.4 1612 47.7
Solyc03g112660.3 Solanum lycopersicum HOM05D004430 ORTHO05D005088 0.0e+00 1150.2 1623 47.7
Lalb_Chr13g0297721 Lupinus albus HOM05D004430 ORTHO05D005088 0.0e+00 1145.2 1597 48.5
Lalb_Chr07g0182821 Lupinus albus HOM05D004430 ORTHO05D005088 0.0e+00 1139.4 1627 47.5
CANSAT80G0620 Cannabis sativa HOM05D004430 ORTHO05D005088 0.0e+00 1133.2 1625 47.6
Ciclev10018497m.g Citrus clementina HOM05D004430 ORTHO05D005088 0.0e+00 1119.8 1416 50.4
VMungo1215G2998 Vigna mungo HOM05D004430 ORTHO05D005088 0.0e+00 1108.2 1649 46.0
Peaxi162Scf00089g00174 Petunia axillaris HOM05D004430 ORTHO05D005088 0.0e+00 1098.6 1619 46.8
Ca_16154_v3 Cicer arietinum L. HOM05D004430 ORTHO05D005088 0.0e+00 1092.4 1618 46.4
Nn3g16781 Nelumbo nucifera HOM05D004430 ORTHO05D005088 0.0e+00 1091.6 1676 45.8
Actinidia19338 Actinidia chinensis HOM05D004430 ORTHO05D005088 0.0e+00 1088.6 1215 55.5
Oeu024704.1 Olea europaea HOM05D004430 ORTHO05D005088 0.0e+00 1087.4 1673 45.0
CiPaw.11G023400 Carya illinoinensis HOM05D004430 ORTHO05D005088 0.0e+00 1081.6 1530 47.0
TPR.G28716 Trifolium pratense HOM05D004430 ORTHO05D005088 0.0e+00 1078.9 1625 45.7
Oeu036008.4 Olea europaea HOM05D004430 ORTHO05D005088 0.0e+00 1077.0 1608 46.7
Hma1.2p1_0046F.1_g026730 Hydrangea macrophylla HOM05D004430 ORTHO05D005088 1.7e-307 1060.1 1215 58.1
ClCG06G017130 Citrullus lanatus HOM05D004430 ORTHO05D005088 3.6e-305 1052.4 1615 45.8
Phvul.003G202300 Phaseolus vulgaris HOM05D004430 ORTHO05D005088 2.0e-303 1046.6 1659 45.1
Eucgr.B00248 Eucalyptus grandis HOM05D004430 ORTHO05D005088 9.1e-301 1037.7 1607 45.0
MELO3C026283.2 Cucumis melo HOM05D004430 ORTHO05D005088 1.4e-296 1023.8 1628 45.1
CsaV3_1G001360 Cucumis sativus L. HOM05D004430 ORTHO05D005088 4.4e-295 1018.8 1624 44.8
CAN.G1166.22 Capsicum annuum HOM05D004430 ORTHO05D005088 1.3e-294 1017.3 1625 45.1
SalBow6G6763 Salvia bowleyana HOM05D004430 ORTHO05D005088 1.8e-293 1013.4 1639 44.6
Ca_16155_v3 Cicer arietinum L. HOM05D004430 ORTHO05D005088 5.4e-293 1011.9 1610 43.5
SalBow6G6905 Salvia bowleyana HOM05D004430 ORTHO05D005088 5.4e-293 1011.9 1639 44.5
Migut.D01964 Erythranthe guttata HOM05D004430 ORTHO05D005088 1.6e-292 1010.4 1642 44.6
AUR62028764 Chenopodium quinoa HOM05D004430 ORTHO05D005088 5.6e-290 1001.9 1645 43.6
Sed0016557 Sechium edule HOM05D004430 ORTHO05D005088 1.7e-286 990.3 1624 44.8
Medtr3g077440 Medicago truncatula HOM05D004430 ORTHO05D005088 3.1e-280 969.5 1625 43.0
MSTRG.4361 Avicennia marina HOM05D004430 ORTHO05D005088 5.4e-277 958.7 1629 42.5
Cc04_g12380 Coffea canephora HOM05D004430 ORTHO05D005088 2.7e-276 956.4 1302 48.8
AUR62008183 Chenopodium quinoa HOM05D004430 ORTHO05D005088 8.9e-272 941.4 1628 42.8
CiPaw.12G028500 Carya illinoinensis HOM05D004430 ORTHO05D005088 2.9e-270 936.4 1393 45.7
Sed0007760 Sechium edule HOM05D004430 ORTHO05D005088 6.4e-270 935.3 1620 42.7
PGR083G1025 Punica granatum HOM05D004430 ORTHO05D005088 8.6e-267 924.9 1640 42.4
EL10Ac5g10708 Beta vulgaris HOM05D004430 ORTHO05D005088 2.2e-262 910.2 1630 42.1
MBI19_g24062_MAGBIO Magnolia biondii HOM05D004430 ORTHO05D005088 3.0e-251 873.2 1730 40.9
Sc04g0001690 Simmondsia chinensis HOM05D004430 ORTHO05D005088 1.4e-248 864.4 1626 41.3
TPR.G28721 Trifolium pratense HOM05D004430 ORTHO05D005088 1.5e-247 860.9 1613 40.5
THA.LOC104809247 Tarenaya hassleriana HOM05D004430 ORTHO05D005088 6.4e-246 855.5 1636 40.0
Medtr3g077450 Medicago truncatula HOM05D004430 ORTHO05D005088 2.4e-245 853.6 1609 40.8
PGSC0003DMG402018164 Solanum tuberosum HOM05D004430 ORTHO05D005088 3.2e-245 853.2 1353 44.3
Hund02762 Selenicereus undatus HOM05D004430 ORTHO05D005088 8.1e-241 838.6 1611 40.5
Psat5g115080 Pisum sativum HOM05D004430 ORTHO05D005088 3.2e-237 826.6 1615 39.4
Aqoxy3G01105 Aquilegia oxysepala HOM05D004430 ORTHO05D005088 4.8e-233 812.8 1654 40.0
ECA232G4503 Erigeron canadensis HOM05D004430 ORTHO05D005088 3.4e-231 806.6 1627 39.6
Psat5g115040 Pisum sativum HOM05D004430 ORTHO05D005088 7.1e-229 798.9 1610 39.0
Ah.11g051460 Amaranthus hybridus HOM05D004430 ORTHO05D005088 1.1e-226 791.6 1640 39.0
THA.LOC104809778 Tarenaya hassleriana HOM05D004430 ORTHO05D005088 7.6e-223 778.9 1617 38.6
PSO017G2086 Papaver somniferum HOM05D004430 ORTHO05D005088 3.8e-222 776.5 1742 38.7
PSO478G3312 Papaver somniferum HOM05D004430 ORTHO05D005088 6.1e-220 769.2 1747 38.1
SGA_v2.0_scaffold7G04148 Striga asiatica HOM05D004430 ORTHO05D005088 5.9e-215 752.7 1653 39.5
Lsat_1_v5_gn_4_75700 Lactuca sativa HOM05D004430 ORTHO05D005088 8.5e-198 695.7 1229 43.0
TAR622G0490 Trochodendron aralioides HOM05D004430 ORTHO05D005088 3.2e-197 693.7 973 47.6
Actinidia33085 Actinidia chinensis HOM05D004430 ORTHO05D005088 8.2e-193 679.1 696 59.3
Sp7g22670 Schrenkiella parvula HOM05D004430 ORTHO05D005088 1.1e-192 678.7 1626 35.8
AT4G24680 Arabidopsis thaliana HOM05D004430 ORTHO05D005088 7.5e-186 656.0 1625 35.3
arahy.Tifrunner.gnm1.ann1.I95HTR Arachis hypogaea HOM05D004430 ORTHO05D005088 7.5e-186 656.0 778 51.0
Aa31LG4G9770 Aethionema arabicum HOM05D004430 ORTHO05D005088 2.3e-179 634.4 1631 35.1
CARHR232060 Cardamine hirsuta HOM05D004430 ORTHO05D005088 8.9e-179 632.5 1621 35.3
Haze_07543 Corylus avellana HOM05D004430 ORTHO05D005088 4.4e-178 630.2 1610 34.1
AL7G28520 Arabidopsis lyrata HOM05D004430 ORTHO05D005088 7.5e-178 629.4 1621 34.7
Carub.0007s1638 Capsella rubella HOM05D004430 ORTHO05D005088 6.3e-177 626.3 1625 35.1
BraA03t14619Z Brassica rapa HOM05D004430 ORTHO05D005088 1.5e-173 615.1 1629 34.9
HanXRQChr17g0548691 Helianthus annuus HOM05D004430 ORTHO05D005088 1.9e-173 614.8 1461 37.9
Thhalv10024213m.g Eutrema salsugineum HOM05D004430 ORTHO05D005088 5.6e-173 613.2 1656 34.2
A03p55450 Brassica napus HOM05D004430 ORTHO05D005088 1.6e-172 611.7 1628 34.8
BolC7t45865H Brassica oleracea HOM05D004430 ORTHO05D005088 1.2e-170 605.5 1629 35.1
Thhalv10024214m.g Eutrema salsugineum HOM05D004430 ORTHO05D005088 1.2e-170 605.5 1635 34.2
C07p53740 Brassica napus HOM05D004430 ORTHO05D005088 1.5e-170 605.1 1628 35.0
MBI10_g44386_MAGBIO Magnolia biondii HOM05D004430 ORTHO05D005088 1.1e-168 599.0 1476 36.3
unitig_37.g12744 Utricularia gibba HOM05D004430 ORTHO05D005088 2.1e-164 584.7 1612 34.4
BcaC06g32869 Brassica carinata HOM05D004430 ORTHO05D005088 3.4e-154 550.8 1613 33.4
HanXRQChr11g0348291 Helianthus annuus HOM05D004430 ORTHO05D005088 5.8e-154 550.1 708 50.3
ATR0757G157 Amborella trichopoda HOM05D004430 ORTHO05D005088 1.9e-152 545.0 1690 33.5
A01p16020 Brassica napus HOM05D004430 ORTHO05D005088 4.1e-144 517.3 1582 33.2
BraA01t01536Z Brassica rapa HOM05D004430 ORTHO05D005088 2.7e-143 514.6 1588 33.1
C01p20010 Brassica napus HOM05D004430 ORTHO05D005088 4.6e-143 513.8 1584 32.9
BolC1t01928H Brassica oleracea HOM05D004430 ORTHO05D005088 3.6e-140 504.2 1594 32.9
BcaB03g12441 Brassica carinata HOM05D004430 ORTHO05D005088 2.2e-129 468.4 1597 30.6
Actinidia19110 Actinidia chinensis HOM05D005107 ORTHO05D006200 1.2e-127 462.6 489 56.2
Actinidia19112 Actinidia chinensis HOM05D004430 ORTHO05D005088 3.0e-126 458.0 334 75.1
BcaC09g50842 Brassica carinata HOM05D004430 ORTHO05D005088 2.4e-123 448.4 1564 31.0
Actinidia19111 Actinidia chinensis HOM05D004430 ORTHO05D005088 7.7e-90 337.0 488 48.2
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 2.4e-83 315.5 1559 30.3
Zm00001eb028710 Zea mays HOM05D004430 ORTHO05D005088 4.1e-83 314.7 1537 30.3
Actinidia33086 Actinidia chinensis HOM05D004430 ORTHO05D005088 1.0e-81 310.1 374 53.5
Zm00001eb136860 Zea mays HOM05D004430 ORTHO05D005088 4.2e-80 304.7 1650 27.6
HPP92_024337 Vanilla planifolia HOM05D004430 ORTHO05D005088 1.5e-77 296.2 1294 30.4
CDE06G0437 Ceratophyllum demersum HOM05D004430 ORTHO05D005088 2.0e-74 285.8 1584 26.8
Cpa.g.sc153.6 Carica papaya HOM05D004430 ORTHO05D005088 1.6e-71 276.2 193 79.8
MBI10_g44384_MAGBIO Magnolia biondii HOM05D004430 ORTHO05D005088 3.7e-68 265.0 199 74.9
SHI17143 Sapria himalayana HOM05D004430 ORTHO05D005088 1.6e-66 259.6 727 34.0
HPP92_006251 Vanilla planifolia HOM05D004430 ORTHO05D005088 4.5e-66 258.1 1344 28.1
CDE02G0036 Ceratophyllum demersum HOM05D004430 ORTHO05D005088 2.0e-53 216.1 201 62.2
HPP92_024330 Vanilla planifolia HOM05D004430 ORTHO05D005088 4.9e-52 211.5 1286 27.2
HPP92_006241 Vanilla planifolia HOM05D004430 ORTHO05D005088 2.3e-46 192.6 209 58.9
SEGI_40513 Sequoiadendron giganteum HOM05D004430 ORTHO05D005088 6.8e-46 191.0 1832 26.4
Actinidia19337 Actinidia chinensis HOM05D004430 ORTHO05D005088 9.2e-43 180.6 180 59.4
TAR629G1829 Trochodendron aralioides HOM05D003072 ORTHO05D008464 8.1e-31 141.0 150 56.7
TAR622G0951 Trochodendron aralioides HOM05D004430 ORTHO05D005088 6.8e-30 137.9 137 59.9
Pp3c26_2830 Physcomitrium patens HOM05D004430 ORTHO05D005088 9.3e-27 127.5 508 32.7
TAR622G0342 Trochodendron aralioides HOM05D004430 ORTHO05D005088 6.0e-26 124.8 90 74.4
Psat2g086200 Pisum sativum HOM05D004430 ORTHO05D005088 1.0e-25 124.0 187 46.5
Psat2g086240 Pisum sativum HOM05D004430 ORTHO05D005088 1.1e-22 114.0 216 41.2
SMO174G0145 Selaginella moellendorffii HOM05D004430 ORTHO05D005088 2.2e-20 106.3 465 30.3
AagrBONN_evm.TU.Sc2ySwM_344.4397 Anthoceros agrestis HOM05D004430 ORTHO05D005088 8.4e-20 104.4 1004 26.8
Psat2g098600 Pisum sativum HOM05D003093 ORTHO05D005088 1.1e-19 104.0 212 40.1
Pp3c26_2670 Physcomitrium patens HOM05D004430 ORTHO05D005088 5.4e-19 101.7 233 39.5
Pp3c4_23740 Physcomitrium patens HOM05D004430 ORTHO05D005088 6.0e-18 98.2 1777 23.2
CBR_g19277 Chara braunii HOM05D004430 ORTHO05D005088 4.3e-16 92.0 509 28.5
THA.LOC104822199 Tarenaya hassleriana HOM05D004430 ORTHO05D005088 4.3e-16 92.0 196 37.2
THA.LOC104816711 Tarenaya hassleriana HOM05D004430 ORTHO05D005088 6.9e-14 84.7 238 29.8
Psat1g046400 Pisum sativum HOM05D004430 ORTHO05D005088 4.5e-13 82.0 181 35.4
Pp3c4_22960 Physcomitrium patens HOM05D004430 ORTHO05D005088 1.1e-11 77.4 1360 24.0
Mapoly0057s0099 Marchantia polymorpha HOM05D004430 ORTHO05D005088 1.9e-11 76.6 1954 23.9
SHI23780 Sapria himalayana HOM05D004430 ORTHO05D005088 2.5e-08 66.2 105 49.5
Lsat_1_v5_gn_0_32021 Lactuca sativa HOM05D000147 ORTHO05D013131 3.1e-06 59.3 81 46.9


User provided reference genes

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