Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20593 Davidia involucrata HOM05D007670 ORTHO05D009646 8.9e-233 810.1 457 100.0
Cc04_g11380 Coffea canephora HOM05D007670 ORTHO05D009646 5.8e-115 418.7 458 57.0
Thecc.03G116000 Theobroma cacao HOM05D007670 ORTHO05D009646 5.8e-115 418.7 447 64.9
Gorai.003G106900 Gossypium raimondii HOM05D007670 ORTHO05D009646 2.4e-113 413.3 455 61.8
Gohir.D03G101500 Gossypium hirsutum HOM05D007670 ORTHO05D009646 9.2e-113 411.4 455 61.8
Potri.015G084300 Populus trichocarpa HOM05D007670 ORTHO05D009646 6.0e-112 408.7 452 61.7
Manes.06G111300 Manihot esculenta HOM05D007670 ORTHO05D009646 3.0e-111 406.4 453 60.9
Gohir.A03G074800 Gossypium hirsutum HOM05D007670 ORTHO05D009646 1.5e-110 404.1 454 60.6
TWI39G0169 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 3.3e-110 402.9 446 59.6
PGR044G2723 Punica granatum HOM05D007670 ORTHO05D009646 1.5e-107 394.0 444 59.7
Ciclev10024352m.g Citrus clementina HOM05D007670 ORTHO05D009646 1.6e-104 384.0 430 58.4
FAN18G1020 Fragaria x ananassa HOM05D007670 ORTHO05D009646 2.3e-103 380.2 484 51.7
FAN04G2873 Fragaria x ananassa HOM05D007670 ORTHO05D009646 3.3e-102 376.3 484 51.2
Prupe.5G164600 Prunus persica HOM05D007670 ORTHO05D009646 4.3e-102 375.9 467 52.2
TWI23G1319 Tripterygium wilfordii HOM05D007670 ORTHO05D009646 1.1e-100 371.3 452 57.7
Nitab4.5_0008913g0020 Nicotiana tabacum HOM05D007670 ORTHO05D009646 4.0e-100 369.4 461 57.5
Migut.O00167 Erythranthe guttata HOM05D007670 ORTHO05D009646 5.2e-100 369.0 471 56.1
COL.COLO4_33501 Corchorus olitorius HOM05D007670 ORTHO05D009646 3.8e-98 362.8 456 58.3
FvH4_5g06391 Fragaria vesca HOM05D007670 ORTHO05D009646 3.8e-98 362.8 484 50.6
Glyma.05G042100 Glycine max HOM05D007670 ORTHO05D009646 6.4e-98 362.1 456 51.3
FAN13G0035 Fragaria x ananassa HOM05D007670 ORTHO05D009646 8.4e-98 361.7 483 50.3
Nitab4.5_0002522g0060 Nicotiana tabacum HOM05D007670 ORTHO05D009646 4.1e-97 359.4 458 57.6
PGSC0003DMG400018192 Solanum tuberosum HOM05D007670 ORTHO05D009646 2.7e-96 356.7 456 57.2
FAN08G1903 Fragaria x ananassa HOM05D007670 ORTHO05D009646 3.5e-96 356.3 483 49.5
Sopen03g031210 Solanum pennellii HOM05D007670 ORTHO05D009646 1.0e-95 354.8 457 56.7
Lj4g0014046 Lotus japonicus HOM05D007670 ORTHO05D009646 1.7e-95 354.0 457 49.9
Atru.chr9.2593 Acer truncatum HOM05D007670 ORTHO05D009646 2.3e-95 353.6 473 51.4
Lsat_1_v5_gn_5_13921 Lactuca sativa HOM05D007670 ORTHO05D009646 3.3e-94 349.7 511 53.2
RcHm_v2.0_Chr7g0192411 Rosa chinensis HOM05D007670 ORTHO05D009646 2.8e-93 346.7 448 50.0
SalBow5G0325 Salvia bowleyana HOM05D007670 ORTHO05D009646 2.8e-93 346.7 474 54.4
TPR.G37476 Trifolium pratense HOM05D007670 ORTHO05D009646 2.8e-93 346.7 461 49.7
Actinidia08035 Actinidia chinensis HOM05D007670 ORTHO05D009646 6.2e-93 345.5 461 50.3
SalBow5G5044 Salvia bowleyana HOM05D007670 ORTHO05D009646 2.4e-92 343.6 474 54.0
Glyma.17G124800 Glycine max HOM05D007670 ORTHO05D009646 2.6e-91 340.1 429 50.8
Aqoxy3G01244 Aquilegia oxysepala HOM05D007670 ORTHO05D009646 5.8e-91 339.0 425 57.6
MD14G1170500 Malus domestica HOM05D007670 ORTHO05D009646 1.7e-90 337.4 467 48.6
DCAR_007451 Daucus carota HOM05D007670 ORTHO05D009646 4.9e-90 335.9 491 46.8
CANSAT80G0945 Cannabis sativa HOM05D007670 ORTHO05D009646 7.1e-89 332.0 457 47.9
Cfa019228 Carpinus fangiana HOM05D007670 ORTHO05D009646 6.0e-88 328.9 477 48.4
ECA246G3610 Erigeron canadensis HOM05D007670 ORTHO05D009646 1.3e-87 327.8 514 51.2
Ca_19420_v3 Cicer arietinum L. HOM05D007670 ORTHO05D009646 2.5e-86 323.6 422 49.3
HanXRQChr05g0156201 Helianthus annuus HOM05D007670 ORTHO05D009646 2.5e-86 323.6 513 50.1
Psat4g061560 Pisum sativum HOM05D007670 ORTHO05D009646 4.3e-86 322.8 461 47.9
Medtr4g104750 Medicago truncatula HOM05D007670 ORTHO05D009646 2.8e-85 320.1 433 49.2
VMungo1215G0346 Vigna mungo HOM05D007670 ORTHO05D009646 4.0e-84 316.2 433 49.2
Cpa.g.sc159.12 Carica papaya HOM05D007670 ORTHO05D009646 2.6e-83 313.5 466 47.4
ClCG03G003050 Citrullus lanatus HOM05D007670 ORTHO05D009646 9.9e-83 311.6 438 45.9
arahy.Tifrunner.gnm1.ann1.4HF9FM Arachis hypogaea HOM05D007670 ORTHO05D009646 4.9e-82 309.3 458 48.0
Phvul.003G205800 Phaseolus vulgaris HOM05D007670 ORTHO05D009646 1.1e-81 308.1 445 47.4
Hma1.2p1_1092F.1_g255930 Hydrangea macrophylla HOM05D007670 ORTHO05D009646 9.3e-81 305.1 314 65.0
PSO478G3950 Papaver somniferum HOM05D007670 ORTHO05D009646 1.9e-78 297.4 463 49.0
arahy.Tifrunner.gnm1.ann1.2S9CTF Arachis hypogaea HOM05D007670 ORTHO05D009646 2.5e-78 297.0 434 48.4
Peaxi162Scf00089g01229 Petunia axillaris HOM05D007670 ORTHO05D009646 5.5e-73 279.3 387 57.4
Sed0003800 Sechium edule HOM05D007670 ORTHO05D009646 2.7e-72 276.9 427 43.1
ATR0824G010 Amborella trichopoda HOM05D007670 ORTHO05D009646 5.8e-67 259.2 406 45.1
Solyc03g112110.1 Solanum lycopersicum HOM05D007670 ORTHO05D009646 8.4e-66 255.4 386 53.9
CiPaw.12G031800 Carya illinoinensis HOM05D007670 ORTHO05D009646 1.3e-61 241.5 449 45.4
GSVIVG01007632001 Vitis vinifera HOM05D007670 ORTHO05D009646 6.3e-61 239.2 267 65.2
TAR629G0999 Trochodendron aralioides HOM05D007670 ORTHO05D009646 6.9e-60 235.7 218 63.8
Lj5C130G15 Lonicera japonica HOM05D007670 ORTHO05D009646 1.4e-57 228.0 422 40.5
Eucgr.K02784 Eucalyptus grandis HOM05D007670 ORTHO05D009646 6.9e-52 209.1 265 60.4
QL10p006759 Quercus lobata HOM05D007670 ORTHO05D009646 9.1e-44 182.2 289 46.0
HPP92_003438 Vanilla planifolia HOM05D001493 ORTHO05D001681 3.9e-39 166.8 422 35.3
Actinidia24601 Actinidia chinensis HOM05D007670 ORTHO05D009646 2.4e-36 157.5 113 70.8
HPP92_001311 Vanilla planifolia HOM05D007670 ORTHO05D009646 5.3e-36 156.4 419 35.1
Sabra15G0107400 Salix brachista HOM05D007670 ORTHO05D009646 1.5e-33 148.3 291 40.9
QL10p006748 Quercus lobata HOM05D007670 ORTHO05D009646 8.2e-29 132.5 140 59.3
TAR629G1516 Trochodendron aralioides HOM05D007670 ORTHO05D009646 1.2e-27 128.6 80 78.8
Zm00001eb388830 Zea mays HOM05D007670 ORTHO05D009646 5.0e-26 123.2 434 30.9
CsaV3_1G008900 Cucumis sativus L. HOM05D007670 ORTHO05D009646 5.5e-25 119.8 138 52.2
MELO3C002304.2 Cucumis melo HOM05D007670 ORTHO05D009646 1.1e-20 105.5 102 49.0
SEGI_28887 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 7.0e-20 102.8 102 50.0
Os01g0909300 Oryza sativa ssp. japonica HOM05D007670 ORTHO05D009646 1.3e-18 98.6 104 50.0
SEGI_38678 Sequoiadendron giganteum HOM05D007670 ORTHO05D009646 8.6e-18 95.9 455 29.0
Peaxi162Scf00089g01230 Petunia axillaris HOM05D007670 ORTHO05D009646 3.6e-16 90.5 69 69.6
Zm00001eb143920 Zea mays HOM05D007670 ORTHO05D009646 6.8e-15 86.3 124 45.2
Zm00001eb393770 Zea mays HOM05D007670 ORTHO05D009646 3.4e-14 84.0 114 46.5
Solyc03g112120.3 Solanum lycopersicum HOM05D007670 ORTHO05D009646 7.5e-14 82.8 67 64.2
Pp3c11_2120 Physcomitrium patens HOM05D007670 ORTHO05D009646 6.3e-13 79.7 107 41.1
Pp3c26_6480 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.3e-10 72.0 107 36.4
Pp3c26_6484 Physcomitrium patens HOM05D007670 ORTHO05D009646 1.3e-10 72.0 107 36.4
Pp3c10_12340 Physcomitrium patens HOM05D007670 ORTHO05D009646 6.6e-10 69.7 108 36.1
Pp3c18_13530 Physcomitrium patens HOM05D007670 ORTHO05D009646 8.0e-08 62.8 105 36.2
Pp3c7_23860 Physcomitrium patens HOM05D007670 ORTHO05D009646 3.1e-07 60.8 102 33.3
Actinidia36758 Actinidia chinensis HOM05D007670 ORTHO05D009646 8.9e-07 59.3 79 49.4
Pp3c21_7410 Physcomitrium patens HOM05D007670 ORTHO05D009646 5.8e-06 56.6 102 32.4


User provided reference genes

Program Settings