Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20468 Davidia involucrata HOM05D000134 ORTHO05D178811 3.1e-36 154.5 71 100.0
Dinv24893 Davidia involucrata HOM05D000134 ORTHO05D007593 1.1e-28 129.4 70 87.1
Lj6A801T80 Lonicera japonica HOM05D000134 ORTHO05D007593 8.6e-26 119.8 70 77.1
Hma1.2p1_1017F.1_g248280 Hydrangea macrophylla HOM05D000134 ORTHO05D007593 4.3e-25 117.5 72 77.8
Nn4g22866 Nelumbo nucifera HOM05D000134 ORTHO05D007593 2.1e-24 115.2 70 74.3
CSS0016340 Camellia sinensis var. sinensis HOM05D000134 ORTHO05D007593 2.8e-24 114.8 70 75.7
CSS0028766 Camellia sinensis var. sinensis HOM05D000134 ORTHO05D007593 2.8e-24 114.8 70 75.7
GSVIVG01020182001 Vitis vinifera HOM05D000134 ORTHO05D007593 8.0e-24 113.2 70 71.4
Lj2g0026362 Lotus japonicus HOM05D000134 ORTHO05D007593 1.1e-23 112.8 71 74.6
Sabra10G0068500 Salix brachista HOM05D000134 ORTHO05D007593 1.4e-23 112.5 71 74.6
DCAR_007100 Daucus carota HOM05D000134 ORTHO05D007593 4.0e-23 110.9 70 72.9
HanXRQChr08g0208961 Helianthus annuus HOM05D000134 ORTHO05D007593 4.0e-23 110.9 74 68.9
arahy.Tifrunner.gnm1.ann1.N4ZDV4 Arachis hypogaea HOM05D000134 ORTHO05D007593 5.2e-23 110.5 71 76.1
arahy.Tifrunner.gnm1.ann1.Q3HJ0Q Arachis hypogaea HOM05D000134 ORTHO05D007593 5.2e-23 110.5 71 76.1
TAR622G0317 Trochodendron aralioides HOM05D000134 ORTHO05D007593 5.2e-23 110.5 70 71.4
VMungo1215G1150 Vigna mungo HOM05D000134 ORTHO05D007593 5.2e-23 110.5 71 71.8
COL.COLO4_19535 Corchorus olitorius HOM05D000134 ORTHO05D007593 8.9e-23 109.8 71 71.8
Duzib248G1157 Durio zibethinus HOM05D000134 ORTHO05D007593 8.9e-23 109.8 71 71.8
Glyma.08G290200 Glycine max HOM05D000134 ORTHO05D007593 8.9e-23 109.8 71 74.6
Ca_22764_v3 Cicer arietinum L. HOM05D000134 ORTHO05D007593 1.2e-22 109.4 71 73.2
Nitab4.5_0001474g0090 Nicotiana tabacum HOM05D000134 ORTHO05D007593 1.2e-22 109.4 70 71.4
Potri.010G095900 Populus trichocarpa HOM05D000134 ORTHO05D007593 1.2e-22 109.4 71 71.8
PGSC0003DMG400004123 Solanum tuberosum HOM05D000134 ORTHO05D007593 1.2e-22 109.4 71 74.6
Lsat_1_v5_gn_8_158281 Lactuca sativa HOM05D000134 ORTHO05D007593 1.5e-22 109.0 74 67.6
Lalb_Chr05g0217101 Lupinus albus HOM05D000134 ORTHO05D007593 1.5e-22 109.0 71 73.2
Potri.008G145900 Populus trichocarpa HOM05D000134 ORTHO05D007593 1.5e-22 109.0 71 73.2
TWI75G0292 Tripterygium wilfordii HOM05D000134 ORTHO05D007593 1.5e-22 109.0 71 71.8
ECA233G2407 Erigeron canadensis HOM05D000134 ORTHO05D007593 2.0e-22 108.6 74 66.2
Glyma.18G134100 Glycine max HOM05D000134 ORTHO05D007593 2.0e-22 108.6 71 73.2
TPR.G4444 Trifolium pratense HOM05D000134 ORTHO05D007593 2.0e-22 108.6 71 70.4
Actinidia08177 Actinidia chinensis HOM05D000134 ORTHO05D007593 2.6e-22 108.2 70 71.4
MSTRG.612 Avicennia marina HOM05D000134 ORTHO05D007593 2.6e-22 108.2 70 71.4
Gohir.D01G130050 Gossypium hirsutum HOM05D000134 ORTHO05D007593 2.6e-22 108.2 71 71.8
Gorai.002G161100 Gossypium raimondii HOM05D000134 ORTHO05D007593 2.6e-22 108.2 71 71.8
Atru.chr11.1976 Acer truncatum HOM05D000134 ORTHO05D007593 3.4e-22 107.8 71 70.4
SGA_v2.0_scaffold166G38350 Striga asiatica HOM05D000134 ORTHO05D007593 3.4e-22 107.8 70 68.6
Phvul.002G073500 Phaseolus vulgaris HOM05D000134 ORTHO05D007593 4.4e-22 107.5 71 70.4
Medtr5g035030 Medicago truncatula HOM05D000134 ORTHO05D007593 5.8e-22 107.1 71 69.0
arahy.Tifrunner.gnm1.ann1.PZT70L Arachis hypogaea HOM05D000134 ORTHO05D007593 7.5e-22 106.7 71 70.4
Psat4g125800 Pisum sativum HOM05D000134 ORTHO05D007593 7.5e-22 106.7 71 70.4
Prupe.1G258200 Prunus persica HOM05D000134 ORTHO05D007593 7.5e-22 106.7 72 69.4
QL03p062165 Quercus lobata HOM05D000134 ORTHO05D007593 7.5e-22 106.7 70 70.0
TWI18G1402 Tripterygium wilfordii HOM05D000134 ORTHO05D007593 7.5e-22 106.7 71 70.4
Haze_12157 Corylus avellana HOM05D000134 ORTHO05D007593 9.8e-22 106.3 71 74.6
Glyma.02G032200 Glycine max HOM05D000134 ORTHO05D007593 1.3e-21 105.9 73 69.9
Sabra08G0110900 Salix brachista HOM05D000134 ORTHO05D007593 1.3e-21 105.9 71 70.4
Thecc.02G247700 Theobroma cacao HOM05D000134 ORTHO05D007593 1.3e-21 105.9 71 69.0
Ciclev10031913m.g Citrus clementina HOM05D000134 ORTHO05D007593 1.7e-21 105.5 71 71.8
Gohir.A03G141800 Gossypium hirsutum HOM05D000134 ORTHO05D007593 1.7e-21 105.5 71 67.6
MD13G1088100 Malus domestica HOM05D000134 ORTHO05D007593 1.7e-21 105.5 72 72.2
Sc04g0008940 Simmondsia chinensis HOM05D000134 ORTHO05D007593 1.7e-21 105.5 70 71.4
EL10Ac6g13630 Beta vulgaris HOM05D000134 ORTHO05D007593 2.2e-21 105.1 70 70.0
CAN.G505.17 Capsicum annuum HOM05D000134 ORTHO05D007593 2.2e-21 105.1 71 71.8
Cc11_g14360 Coffea canephora HOM05D000134 ORTHO05D007593 2.2e-21 105.1 70 68.6
Glyma.01G034100 Glycine max HOM05D000134 ORTHO05D007593 2.2e-21 105.1 73 69.9
Actinidia27773 Actinidia chinensis HOM05D000134 ORTHO05D007593 2.9e-21 104.8 70 70.0
TAR374G0472 Trochodendron aralioides HOM05D000134 ORTHO05D007593 3.7e-21 104.4 70 70.0
Manes.05G090100 Manihot esculenta HOM05D000134 ORTHO05D007593 4.9e-21 104.0 71 69.0
Medtr8g063300 Medicago truncatula HOM05D000134 ORTHO05D007593 4.9e-21 104.0 71 70.4
Ah.03g132460 Amaranthus hybridus HOM05D000134 ORTHO05D007593 1.1e-20 102.8 70 70.0
FAN22G0272 Fragaria x ananassa HOM05D000134 ORTHO05D007593 1.1e-20 102.8 72 70.8
SalBow2G1709 Salvia bowleyana HOM05D000134 ORTHO05D007593 1.1e-20 102.8 70 64.3
Rhsim12G0048300 Rhododendron simsii HOM05D000134 ORTHO05D007593 1.9e-20 102.1 70 68.6
PGR119G1701 Punica granatum HOM05D000134 ORTHO05D007593 4.1e-20 100.9 70 68.6
RcHm_v2.0_Chr4g0444341 Rosa chinensis HOM05D000134 ORTHO05D007593 4.1e-20 100.9 72 69.4
Gorai.005G184800 Gossypium raimondii HOM05D000134 ORTHO05D007593 5.4e-20 100.5 71 64.8
PGR102G2477 Punica granatum HOM05D000134 ORTHO05D007593 7.0e-20 100.1 71 67.6
CANSAT01G2751 Cannabis sativa HOM05D000134 ORTHO05D007593 1.2e-19 99.4 71 66.2
Nn3g16956 Nelumbo nucifera HOM05D000134 ORTHO05D007593 1.2e-19 99.4 70 71.4
Gohir.A04G134800 Gossypium hirsutum HOM05D000134 ORTHO05D007593 2.1e-19 98.6 72 65.3
Gohir.D04G178000 Gossypium hirsutum HOM05D000134 ORTHO05D007593 2.1e-19 98.6 72 65.3
Aqoxy3G03063 Aquilegia oxysepala HOM05D000134 ORTHO05D007593 4.6e-19 97.4 71 67.6
Migut.L01437 Erythranthe guttata HOM05D000134 ORTHO05D007593 4.6e-19 97.4 72 66.7
FAN07G1434 Fragaria x ananassa HOM05D000134 ORTHO05D007593 4.6e-19 97.4 72 68.1
FAN17G0394 Fragaria x ananassa HOM05D000134 ORTHO05D007593 4.6e-19 97.4 72 68.1
Gohir.D02G164900 Gossypium hirsutum HOM05D000134 ORTHO05D007593 4.6e-19 97.4 77 61.0
Gorai.012G170900 Gossypium raimondii HOM05D000134 ORTHO05D007593 4.6e-19 97.4 72 65.3
arahy.Tifrunner.gnm1.ann1.XJZ826 Arachis hypogaea HOM05D000134 ORTHO05D007593 6.0e-19 97.1 76 64.5
AUR62005325 Chenopodium quinoa HOM05D000134 ORTHO05D007593 6.0e-19 97.1 70 65.7
FvH4_4g34900 Fragaria vesca HOM05D000134 ORTHO05D007593 6.0e-19 97.1 72 68.1
FAN12G3584 Fragaria x ananassa HOM05D000134 ORTHO05D007593 6.0e-19 97.1 72 68.1
CSS0038193 Camellia sinensis var. sinensis HOM05D000134 ORTHO05D007593 2.3e-18 95.1 70 64.3
MD16G1088500 Malus domestica HOM05D000134 ORTHO05D007593 3.9e-18 94.4 72 65.3
Eucgr.B03359 Eucalyptus grandis HOM05D000134 ORTHO05D007593 5.1e-18 94.0 71 67.6
Cpa.g.sc258.2 Carica papaya HOM05D000134 ORTHO05D007593 2.5e-17 91.7 71 62.0
Sed0000875 Sechium edule HOM05D000134 ORTHO05D007593 5.6e-17 90.5 73 64.4
PSO017G6408 Papaver somniferum HOM05D000134 ORTHO05D007593 9.5e-17 89.7 70 62.9
PSO478G1076 Papaver somniferum HOM05D000134 ORTHO05D007593 1.2e-16 89.4 70 64.3
ATR1149G094 Amborella trichopoda HOM05D000134 ORTHO05D007593 1.6e-16 89.0 70 61.4
ClCG10G013190 Citrullus lanatus HOM05D000134 ORTHO05D007593 6.2e-16 87.0 77 57.1
Eucgr.B02547 Eucalyptus grandis HOM05D000134 ORTHO05D007593 6.2e-16 87.0 71 62.0
THA.LOC104823084 Tarenaya hassleriana HOM05D000134 ORTHO05D007593 8.1e-16 86.7 72 62.5
HPP92_016980 Vanilla planifolia HOM05D000134 ORTHO05D007593 8.1e-16 86.7 70 57.1
CARHR024330 Cardamine hirsuta HOM05D000134 ORTHO05D007593 5.2e-15 84.0 71 62.0
THA.LOC104822057 Tarenaya hassleriana HOM05D000134 ORTHO05D007593 6.8e-15 83.6 85 56.5
Thhalv10008007m.g Eutrema salsugineum HOM05D000134 ORTHO05D007593 1.5e-14 82.4 71 62.0
BcaC05g26300 Brassica carinata HOM05D000134 ORTHO05D007593 2.0e-14 82.0 71 60.6
DCAR_026547 Daucus carota HOM05D000134 ORTHO05D007593 3.4e-14 81.3 65 61.5
PSO832G0578 Papaver somniferum HOM05D000134 ORTHO05D007593 1.3e-13 79.3 96 47.9
Aa31LG7G7820 Aethionema arabicum HOM05D000134 ORTHO05D007593 2.2e-13 78.6 85 54.1
CsaV3_3G043420 Cucumis sativus L. HOM05D000134 ORTHO05D007593 5.4e-12 73.9 82 50.0
Carub.0001s2345 Capsella rubella HOM05D000134 ORTHO05D007593 1.6e-11 72.4 85 51.8
MELO3C026903.2 Cucumis melo HOM05D000134 ORTHO05D007593 1.6e-11 72.4 84 48.8
Sp1g21360 Schrenkiella parvula HOM05D000134 ORTHO05D007593 2.7e-11 71.6 85 51.8
AT1G24030 Arabidopsis thaliana HOM05D000134 ORTHO05D007593 6.0e-11 70.5 85 51.8
Zm00001eb098860 Zea mays HOM05D000134 ORTHO05D007593 6.0e-11 70.5 71 49.3
MBI15_g12953_MAGBIO Magnolia biondii HOM05D000134 ORTHO05D007593 1.7e-10 68.9 45 73.3
A09p40820 Brassica napus HOM05D000134 ORTHO05D007593 3.0e-10 68.2 85 50.6
C05p23170 Brassica napus HOM05D000134 ORTHO05D007593 3.0e-10 68.2 85 50.6
BolC5t31018H Brassica oleracea HOM05D000134 ORTHO05D007593 3.0e-10 68.2 85 50.6
BraA09t39577Z Brassica rapa HOM05D000134 ORTHO05D007593 3.0e-10 68.2 85 50.6
Nitab4.5_0004963g0050 Nicotiana tabacum HOM05D000134 ORTHO05D007593 3.0e-10 68.2 46 73.9
VMungo0251G3669 Vigna mungo HOM05D000134 ORTHO05D007593 9.5e-09 63.2 47 70.2
SEGI_19786 Sequoiadendron giganteum HOM05D000134 ORTHO05D007593 1.6e-08 62.4 75 46.7
AUR62013975 Chenopodium quinoa HOM05D000026 ORTHO05D000127 2.1e-08 62.0 46 65.2
vmacro22614 Vaccinium macrocarpon HOM05D000134 ORTHO05D007593 4.7e-08 60.8 44 65.9


User provided reference genes

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