Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20369 Davidia involucrata HOM05D006671 ORTHO05D008637 2.5e-217 758.4 367 100.0
CSS0038482 Camellia sinensis var. sinensis HOM05D006671 ORTHO05D008637 1.0e-167 593.6 367 76.6
Rhsim08G0246200 Rhododendron simsii HOM05D006671 ORTHO05D008637 2.7e-163 578.9 367 74.7
vmacro18708 Vaccinium macrocarpon HOM05D006671 ORTHO05D008637 1.4e-159 566.6 367 72.2
Cc04_g00530 Coffea canephora HOM05D006671 ORTHO05D008637 1.9e-156 556.2 364 71.7
Actinidia24409 Actinidia chinensis HOM05D006671 ORTHO05D008637 4.1e-156 555.1 367 72.8
CiPaw.03G010100 Carya illinoinensis HOM05D006671 ORTHO05D008637 1.3e-154 550.1 374 71.1
Sopen12g024210 Solanum pennellii HOM05D006671 ORTHO05D008637 1.9e-153 546.2 367 71.1
Solyc12g055740.2 Solanum lycopersicum HOM05D006671 ORTHO05D008637 9.5e-153 543.9 367 71.1
PGSC0003DMG402028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 8.1e-152 540.8 367 70.8
TAR623G0926 Trochodendron aralioides HOM05D006671 ORTHO05D008637 8.1e-152 540.8 367 69.8
DCAR_007665 Daucus carota HOM05D006671 ORTHO05D008637 1.2e-150 537.0 390 66.4
CAN.G390.42 Capsicum annuum HOM05D006671 ORTHO05D008637 1.9e-148 529.6 367 69.5
Ciclev10025368m.g Citrus clementina HOM05D006671 ORTHO05D008637 1.9e-148 529.6 363 70.0
MSTRG.9549 Avicennia marina HOM05D006671 ORTHO05D008637 2.4e-148 529.3 364 68.1
SalBow7G2314 Salvia bowleyana HOM05D006671 ORTHO05D008637 3.2e-148 528.9 364 69.0
ECA234G0268 Erigeron canadensis HOM05D006671 ORTHO05D008637 9.2e-148 527.3 365 68.2
Duzib160G0342 Durio zibethinus HOM05D006671 ORTHO05D008637 1.2e-147 526.9 364 68.7
COL.COLO4_26801 Corchorus olitorius HOM05D006671 ORTHO05D008637 6.0e-147 524.6 364 69.2
Thecc.06G048900 Theobroma cacao HOM05D006671 ORTHO05D008637 6.0e-147 524.6 364 68.7
Sc12g0010960 Simmondsia chinensis HOM05D006671 ORTHO05D008637 7.8e-147 524.2 367 67.0
Phvul.010G121800 Phaseolus vulgaris HOM05D006671 ORTHO05D008637 1.0e-146 523.9 366 67.8
Nitab4.5_0003469g0010 Nicotiana tabacum HOM05D006671 ORTHO05D008637 3.0e-146 522.3 362 70.4
Potri.001G161100 Populus trichocarpa HOM05D006671 ORTHO05D008637 8.6e-146 520.8 366 67.8
Gohir.D13G119900 Gossypium hirsutum HOM05D006671 ORTHO05D008637 1.1e-145 520.4 364 67.3
Atru.chr1.4182 Acer truncatum HOM05D006671 ORTHO05D008637 1.5e-145 520.0 363 69.7
Gorai.013G134300 Gossypium raimondii HOM05D006671 ORTHO05D008637 4.3e-145 518.5 368 67.1
PGSC0003DMG401028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 1.2e-144 516.9 368 68.5
MD09G1171100 Malus domestica HOM05D006671 ORTHO05D008637 3.6e-144 515.4 364 69.5
CANSAT56G3116 Cannabis sativa HOM05D006671 ORTHO05D008637 1.1e-143 513.8 364 67.0
Migut.D00903 Erythranthe guttata HOM05D006671 ORTHO05D008637 2.4e-143 512.7 367 66.8
Lalb_Chr10g0101031 Lupinus albus HOM05D006671 ORTHO05D008637 2.0e-142 509.6 368 67.1
Nn8g41287 Nelumbo nucifera HOM05D006671 ORTHO05D008637 9.9e-142 507.3 367 66.5
TPR.G26443 Trifolium pratense HOM05D006671 ORTHO05D008637 1.3e-141 506.9 366 66.1
Lj5C27T5 Lonicera japonica HOM05D006671 ORTHO05D008637 4.9e-141 505.0 320 75.9
Glyma.07G047100 Glycine max HOM05D006671 ORTHO05D008637 8.4e-141 504.2 366 65.8
Aqoxy2G04033 Aquilegia oxysepala HOM05D006671 ORTHO05D008637 1.9e-140 503.1 364 65.4
Psat4g165440 Pisum sativum HOM05D006671 ORTHO05D008637 1.9e-140 503.1 366 65.8
SGA_v2.0_scaffold4G02101 Striga asiatica HOM05D006671 ORTHO05D008637 5.4e-140 501.5 370 66.5
Eucgr.I02172 Eucalyptus grandis HOM05D006671 ORTHO05D008637 7.1e-140 501.1 364 65.9
Medtr8g023620 Medicago truncatula HOM05D006671 ORTHO05D008637 3.5e-139 498.8 368 64.7
Glyma.16G015100 Glycine max HOM05D006671 ORTHO05D008637 6.0e-139 498.0 369 65.9
Lj3g0013980 Lotus japonicus HOM05D006671 ORTHO05D008637 5.1e-138 495.0 373 64.3
Prupe.3G029600 Prunus persica HOM05D006671 ORTHO05D008637 5.1e-138 495.0 364 67.3
Lsat_1_v5_gn_5_137600 Lactuca sativa HOM05D006671 ORTHO05D008637 6.6e-138 494.6 368 64.7
Manes.11G010600 Manihot esculenta HOM05D006671 ORTHO05D008637 6.6e-138 494.6 365 64.4
TWI59G0357 Tripterygium wilfordii HOM05D006671 ORTHO05D008637 3.3e-137 492.3 364 67.9
RcHm_v2.0_Chr2g0148251 Rosa chinensis HOM05D006671 ORTHO05D008637 7.3e-137 491.1 368 65.5
PGR119G0898 Punica granatum HOM05D006671 ORTHO05D008637 1.6e-136 490.0 366 63.7
HanXRQChr10g0311581 Helianthus annuus HOM05D006671 ORTHO05D008637 2.8e-136 489.2 365 64.7
PSO017G0187 Papaver somniferum HOM05D006671 ORTHO05D008637 4.8e-136 488.4 364 65.4
EL10Ac7g18235 Beta vulgaris HOM05D006671 ORTHO05D008637 6.2e-136 488.0 366 62.8
Sabra01G0131200 Salix brachista HOM05D006671 ORTHO05D008637 1.8e-135 486.5 423 57.9
Aa31LG10G1550 Aethionema arabicum HOM05D006671 ORTHO05D008637 9.3e-132 474.2 364 61.8
arahy.Tifrunner.gnm1.ann1.NMV212 Arachis hypogaea HOM05D006671 ORTHO05D008637 1.8e-130 469.9 366 62.6
Sp1g40250 Schrenkiella parvula HOM05D006671 ORTHO05D008637 5.1e-130 468.4 364 61.3
GSVIVG01026409001 Vitis vinifera HOM05D006671 ORTHO05D008637 5.1e-130 468.4 584 45.2
BolC3t21495H Brassica oleracea HOM05D006671 ORTHO05D008637 6.7e-130 468.0 364 61.0
PSO170G0973 Papaver somniferum HOM05D006671 ORTHO05D008637 1.1e-129 467.2 402 59.2
arahy.Tifrunner.gnm1.ann1.YS0GDU Arachis hypogaea HOM05D006671 ORTHO05D008637 1.9e-129 466.5 366 62.3
Thhalv10011378m.g Eutrema salsugineum HOM05D006671 ORTHO05D008637 2.5e-129 466.1 364 60.4
CDE06G0010 Ceratophyllum demersum HOM05D006671 ORTHO05D008637 3.3e-129 465.7 364 61.8
BcaB04g17063 Brassica carinata HOM05D006671 ORTHO05D008637 3.7e-128 462.2 364 60.4
BcaC01g01410 Brassica carinata HOM05D006671 ORTHO05D008637 3.7e-128 462.2 364 60.2
A08p01430 Brassica napus HOM05D006671 ORTHO05D008637 6.2e-128 461.5 364 60.2
AL1G62410 Arabidopsis lyrata HOM05D006671 ORTHO05D008637 8.1e-128 461.1 367 59.9
AT1G53710 Arabidopsis thaliana HOM05D006671 ORTHO05D008637 8.1e-128 461.1 364 60.2
C03p91740 Brassica napus HOM05D006671 ORTHO05D008637 1.4e-127 460.3 364 59.9
Carub.0001s4299 Capsella rubella HOM05D006671 ORTHO05D008637 1.4e-127 460.3 364 59.3
BraA08t32194Z Brassica rapa HOM05D006671 ORTHO05D008637 1.8e-127 459.9 364 59.9
FvH4_6g36250 Fragaria vesca HOM05D006671 ORTHO05D008637 2.4e-127 459.5 363 62.8
FAN14G1234 Fragaria x ananassa HOM05D006671 ORTHO05D008637 2.6e-126 456.1 363 62.5
Os03g0397300 Oryza sativa ssp. japonica HOM05D006671 ORTHO05D008637 2.2e-125 453.0 364 60.4
Zm00001eb392730 Zea mays HOM05D006671 ORTHO05D008637 2.9e-125 452.6 364 60.4
HPP92_002242 Vanilla planifolia HOM05D006671 ORTHO05D008637 8.4e-125 451.1 364 60.7
CARHR044010 Cardamine hirsuta HOM05D006671 ORTHO05D008637 4.2e-124 448.7 364 57.7
MBI13_g05970_MAGBIO Magnolia biondii HOM05D006671 ORTHO05D008637 3.9e-122 442.2 321 67.3
Cpa.g.sc229.10 Carica papaya HOM05D006671 ORTHO05D008637 1.5e-121 440.3 367 59.1
Haze_14039 Corylus avellana HOM05D006671 ORTHO05D008637 8.2e-120 434.5 369 62.3
FAN09G2187 Fragaria x ananassa HOM05D006671 ORTHO05D008637 6.9e-119 431.4 363 59.8
SEGI_35568 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 4.9e-117 425.2 372 56.7
Nitab4.5_0000357g0220 Nicotiana tabacum HOM05D006671 ORTHO05D008637 1.9e-116 423.3 367 59.9
Hma1.2p1_1104F.1_g257490 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 2.5e-116 422.9 259 77.6
unitig_699.g19656 Utricularia gibba HOM05D006671 ORTHO05D001254 3.2e-116 422.5 371 57.4
Ah.08g217540 Amaranthus hybridus HOM05D006671 ORTHO05D008637 4.2e-116 422.2 364 57.7
AUR62001377 Chenopodium quinoa HOM05D006671 ORTHO05D008637 7.1e-116 421.4 316 63.0
FAN14G2634 Fragaria x ananassa HOM05D006671 ORTHO05D008637 7.4e-113 411.4 366 58.2
AUR62044064 Chenopodium quinoa HOM05D006671 ORTHO05D008637 1.2e-110 404.1 301 63.5
VMungo0331G0057 Vigna mungo HOM05D006671 ORTHO05D008637 7.6e-110 401.4 293 65.5
Actinidia33812 Actinidia chinensis HOM05D006671 ORTHO05D008637 1.4e-108 397.1 357 58.3
QL03p047059 Quercus lobata HOM05D006671 ORTHO05D008637 8.5e-101 371.3 260 71.2
Pp3c21_8010 Physcomitrium patens HOM05D006671 ORTHO05D008637 5.5e-100 368.6 372 49.5
Peaxi162Scf00177g00616 Petunia axillaris HOM05D006671 ORTHO05D008637 9.7e-97 357.8 289 64.0
Ca_23471_v3 Cicer arietinum L. HOM05D006671 ORTHO05D008637 1.0e-93 347.8 246 67.9
AagrBONN_evm.TU.Sc2ySwM_362.1979 Anthoceros agrestis HOM05D006671 ORTHO05D008637 6.5e-93 345.1 371 47.4
SMO347G0345 Selaginella moellendorffii HOM05D006671 ORTHO05D008637 9.4e-92 341.3 375 45.9
Gohir.A13G116750 Gossypium hirsutum HOM05D006671 ORTHO05D008637 2.9e-77 293.1 202 68.3
Mapoly0048s0109 Marchantia polymorpha HOM05D006671 ORTHO05D008637 6.5e-69 265.4 373 38.6
FAN02G1271 Fragaria x ananassa HOM05D006671 ORTHO05D008637 2.2e-64 250.4 256 51.2
THA.LOC104822767 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 7.0e-63 245.4 181 61.3
THA.LOC104803433 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 2.2e-56 223.8 184 59.2
Oeu006761.2 Olea europaea HOM05D006671 ORTHO05D008637 9.2e-47 191.8 110 78.2
Actinidia21852 Actinidia chinensis HOM05D006671 ORTHO05D008637 4.7e-43 179.5 127 69.3
MCO09G741 Micromonas commoda HOM05D006671 ORTHO05D008637 8.1e-43 178.7 418 31.3
Hund05690 Selenicereus undatus HOM05D006671 ORTHO05D008637 7.5e-41 172.2 126 65.9
Hma1.2p1_1104F.1_g257500 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 4.1e-39 166.4 97 80.4
BcaNung02916 Brassica carinata HOM05D006671 ORTHO05D008637 2.1e-38 164.1 303 36.6
QL03p047068 Quercus lobata HOM05D006671 ORTHO05D008637 2.1e-38 164.1 110 69.1
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 4.7e-35 152.9 296 37.5
MD17G1156100 Malus domestica HOM05D006671 ORTHO05D008637 6.2e-35 152.5 274 38.3
ATR0006G018 Amborella trichopoda HOM05D006671 ORTHO05D008637 2.2e-32 144.1 98 65.3
SEGI_04788 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 1.3e-29 134.8 98 62.2
Actinidia21851 Actinidia chinensis HOM05D006671 ORTHO05D008637 3.6e-27 126.7 82 72.0
Cfa022026 Carpinus fangiana HOM05D002393 ORTHO05D123579 4.0e-26 123.2 470 27.7
Gohir.A13G116801 Gossypium hirsutum HOM05D006671 ORTHO05D008637 7.6e-25 119.0 78 67.9
Lsat_1_v5_gn_2_122021 Lactuca sativa HOM05D006671 ORTHO05D008637 3.2e-15 87.0 110 43.6
Pp3c20_15640 Physcomitrium patens HOM05D008167 ORTHO05D010296 7.9e-14 82.4 340 25.0
CSS0027715 Camellia sinensis var. sinensis HOM05D006671 ORTHO05D008637 1.3e-11 75.1 41 73.2
TAR628G0982 Trochodendron aralioides HOM05D008167 ORTHO05D010296 6.9e-10 69.3 281 23.1
AUR62027724 Chenopodium quinoa HOM05D008167 ORTHO05D010296 2.0e-09 67.8 278 24.1
Os06g0222800 Oryza sativa ssp. japonica HOM05D008167 ORTHO05D010296 7.6e-09 65.9 360 23.3
EL10Ac1g01257 Beta vulgaris HOM05D008167 ORTHO05D010296 1.7e-08 64.7 279 22.6
BcaC09g48416 Brassica carinata HOM05D006671 ORTHO05D027459 2.2e-08 64.3 69 47.8
C01p50010 Brassica napus HOM05D010519 ORTHO05D027459 2.2e-08 64.3 69 47.8
BolC1t04958H Brassica oleracea HOM05D010519 ORTHO05D027459 2.2e-08 64.3 69 47.8
Thecc.08G110600 Theobroma cacao HOM05D008167 ORTHO05D010296 6.4e-08 62.8 327 22.0
Actinidia10306 Actinidia chinensis HOM05D008167 ORTHO05D010296 8.4e-08 62.4 285 25.3
Manes.02G154800 Manihot esculenta HOM05D008167 ORTHO05D010296 8.4e-08 62.4 419 21.7
Lj3g0012000 Lotus japonicus HOM05D008167 ORTHO05D010296 1.1e-07 62.0 333 23.1
Lj4C716T9 Lonicera japonica HOM05D008167 ORTHO05D010296 5.5e-07 59.7 367 21.5
arahy.Tifrunner.gnm1.ann1.R32LA5 Arachis hypogaea HOM05D008167 ORTHO05D010296 1.6e-06 58.2 347 23.1
Potri.002G093800 Populus trichocarpa HOM05D008167 ORTHO05D010296 3.5e-06 57.0 381 20.2
Dinv13035 Davidia involucrata HOM05D008167 ORTHO05D010296 4.6e-06 56.6 315 21.3


User provided reference genes

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