Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20350 Davidia involucrata HOM05D004748 ORTHO05D005825 1.3e-216 756.1 385 100.0
Hma1.2p1_0517F.1_g170660 Hydrangea macrophylla HOM05D004748 ORTHO05D005825 4.4e-140 501.9 401 71.6
TAR625G1093 Trochodendron aralioides HOM05D004748 ORTHO05D005825 4.4e-140 501.9 374 72.5
Actinidia31132 Actinidia chinensis HOM05D004748 ORTHO05D005825 9.7e-140 500.7 392 73.7
Rhsim12G0214600 Rhododendron simsii HOM05D004748 ORTHO05D005825 5.3e-138 495.0 413 70.2
CSS0006652 Camellia sinensis var. sinensis HOM05D004748 ORTHO05D005825 2.2e-136 489.6 379 71.8
CiPaw.01G089000 Carya illinoinensis HOM05D004748 ORTHO05D005825 9.4e-135 484.2 382 69.4
COL.COLO4_31191 Corchorus olitorius HOM05D004748 ORTHO05D005825 2.7e-134 482.6 305 81.0
Ciclev10025586m.g Citrus clementina HOM05D004748 ORTHO05D005825 8.8e-133 477.6 298 80.9
Migut.I01182 Erythranthe guttata HOM05D004748 ORTHO05D005825 1.2e-132 477.2 375 69.3
Manes.03G081362 Manihot esculenta HOM05D004748 ORTHO05D005825 3.3e-132 475.7 306 80.7
GSVIVG01029626001 Vitis vinifera HOM05D004748 ORTHO05D005825 9.7e-132 474.2 317 79.8
Thecc.06G061000 Theobroma cacao HOM05D004748 ORTHO05D005825 2.2e-131 473.0 308 78.9
AUR62001358 Chenopodium quinoa HOM05D004748 ORTHO05D005825 6.3e-131 471.5 298 81.9
CANSAT01G3164 Cannabis sativa HOM05D004748 ORTHO05D005825 1.4e-130 470.3 300 79.7
EL10Ac7g18182 Beta vulgaris HOM05D004748 ORTHO05D005825 2.4e-130 469.5 361 70.4
AUR62025643 Chenopodium quinoa HOM05D004748 ORTHO05D005825 2.4e-130 469.5 298 81.5
Prupe.3G019200 Prunus persica HOM05D004748 ORTHO05D005825 4.1e-130 468.8 377 69.8
QL05p082110 Quercus lobata HOM05D004748 ORTHO05D005825 5.3e-130 468.4 290 82.1
TWI12G1435 Tripterygium wilfordii HOM05D004748 ORTHO05D005825 9.1e-130 467.6 371 68.5
ClCG09G001570 Citrullus lanatus HOM05D004748 ORTHO05D005825 3.5e-129 465.7 376 69.1
Gohir.A06G115900 Gossypium hirsutum HOM05D004748 ORTHO05D005825 3.5e-129 465.7 371 68.2
MD09G1160600 Malus domestica HOM05D004748 ORTHO05D005825 3.5e-129 465.7 376 70.5
Sed0019048 Sechium edule HOM05D004748 ORTHO05D005825 3.5e-129 465.7 376 68.9
Cfa002138 Carpinus fangiana HOM05D004748 ORTHO05D005825 4.5e-129 465.3 293 81.9
Potri.010G251300 Populus trichocarpa HOM05D004748 ORTHO05D005825 4.5e-129 465.3 370 68.9
CsaV3_7G033760 Cucumis sativus L. HOM05D004748 ORTHO05D005825 5.9e-129 464.9 382 67.3
Gorai.010G141000 Gossypium raimondii HOM05D004748 ORTHO05D005825 5.9e-129 464.9 363 70.0
MD17G1146400 Malus domestica HOM05D004748 ORTHO05D005825 1.7e-128 463.4 366 71.3
THA.LOC104816897 Tarenaya hassleriana HOM05D004748 ORTHO05D005825 2.2e-128 463.0 299 79.9
Gohir.D06G120700 Gossypium hirsutum HOM05D004748 ORTHO05D005825 2.9e-128 462.6 363 69.7
Sabra10G0195200 Salix brachista HOM05D004748 ORTHO05D005825 2.9e-128 462.6 371 68.5
DCAR_022622 Daucus carota HOM05D004748 ORTHO05D005825 3.8e-128 462.2 355 71.0
Lj3g0017034 Lotus japonicus HOM05D004748 ORTHO05D005825 3.8e-128 462.2 272 85.3
Aqoxy7G02343 Aquilegia oxysepala HOM05D004748 ORTHO05D005825 5.0e-128 461.8 384 67.4
Lsat_1_v5_gn_5_137380 Lactuca sativa HOM05D004748 ORTHO05D005825 1.5e-127 460.3 311 77.2
MSTRG.10889 Avicennia marina HOM05D004748 ORTHO05D005825 7.2e-127 458.0 375 67.2
VMungo0647G1450 Vigna mungo HOM05D004748 ORTHO05D005825 7.2e-127 458.0 274 84.3
HanXRQChr10g0311461 Helianthus annuus HOM05D004748 ORTHO05D005825 3.6e-126 455.7 274 83.9
Phvul.008G254900 Phaseolus vulgaris HOM05D004748 ORTHO05D005825 4.7e-126 455.3 268 85.4
Sc12g0011080 Simmondsia chinensis HOM05D004748 ORTHO05D005825 8.0e-126 454.5 278 81.7
PGSC0003DMG400026506 Solanum tuberosum HOM05D004748 ORTHO05D005825 8.0e-126 454.5 375 68.8
RcHm_v2.0_Chr2g0149771 Rosa chinensis HOM05D004748 ORTHO05D005825 1.0e-125 454.1 324 75.6
Carub.0001s4046 Capsella rubella HOM05D004748 ORTHO05D005825 1.4e-125 453.8 338 72.2
Glyma.08G222000 Glycine max HOM05D004748 ORTHO05D005825 1.4e-125 453.8 268 85.8
Solyc06g063250.3 Solanum lycopersicum HOM05D004748 ORTHO05D005825 1.4e-125 453.8 318 75.2
Glyma.07G020100 Glycine max HOM05D004748 ORTHO05D005825 1.8e-125 453.4 281 82.9
Peaxi162Scf00207g01631 Petunia axillaris HOM05D004748 ORTHO05D005825 1.8e-125 453.4 304 77.3
Sopen06g022700 Solanum pennellii HOM05D004748 ORTHO05D005825 2.3e-125 453.0 318 75.2
PGR102G1746 Punica granatum HOM05D004748 ORTHO05D005825 3.0e-125 452.6 272 86.0
Cc04_g00320 Coffea canephora HOM05D004748 ORTHO05D005825 5.2e-125 451.8 305 77.7
ECA234G0898 Erigeron canadensis HOM05D004748 ORTHO05D005825 6.8e-125 451.4 269 84.8
Lalb_Chr04g0264641 Lupinus albus HOM05D004748 ORTHO05D005825 8.8e-125 451.1 262 87.4
BcaB07g33612 Brassica carinata HOM05D004748 ORTHO05D005825 1.5e-124 450.3 296 78.4
Psat7g261000 Pisum sativum HOM05D004748 ORTHO05D005825 1.5e-124 450.3 273 82.4
Duzib192G0179 Durio zibethinus HOM05D004748 ORTHO05D005825 2.0e-124 449.9 258 88.4
Aa31LG10G3160 Aethionema arabicum HOM05D004748 ORTHO05D005825 3.4e-124 449.1 301 79.1
MBI14_g10723_MAGBIO Magnolia biondii HOM05D004748 ORTHO05D005825 4.4e-124 448.7 268 84.7
CARHR041760 Cardamine hirsuta HOM05D004748 ORTHO05D005825 9.8e-124 447.6 320 75.0
Eucgr.F04020 Eucalyptus grandis HOM05D004748 ORTHO05D005825 9.8e-124 447.6 305 76.1
Thhalv10011469m.g Eutrema salsugineum HOM05D004748 ORTHO05D005825 9.8e-124 447.6 308 77.6
BraA05t20854Z Brassica rapa HOM05D004748 ORTHO05D005825 1.7e-123 446.8 316 74.7
Sp1g38250 Schrenkiella parvula HOM05D004748 ORTHO05D005825 1.7e-123 446.8 316 75.0
unitig_748.g7080 Utricularia gibba HOM05D006371 ORTHO05D005825 2.2e-123 446.4 258 85.3
AL1G59520 Arabidopsis lyrata HOM05D004748 ORTHO05D005825 2.8e-123 446.0 314 74.2
BcaB02g11258 Brassica carinata HOM05D004748 ORTHO05D005825 4.8e-123 445.3 314 74.2
BraA06t23445Z Brassica rapa HOM05D004748 ORTHO05D005825 4.8e-123 445.3 299 77.9
CDE07G1729 Ceratophyllum demersum HOM05D004748 ORTHO05D005825 4.8e-123 445.3 299 77.6
Ca_20497_v3 Cicer arietinum L. HOM05D004748 ORTHO05D005825 6.3e-123 444.9 277 81.6
TPR.G15725 Trifolium pratense HOM05D004748 ORTHO05D005825 6.3e-123 444.9 273 82.4
BcaC08g43322 Brassica carinata HOM05D004748 ORTHO05D005825 1.1e-122 444.1 299 77.9
BolC6t35782H Brassica oleracea HOM05D004748 ORTHO05D005825 1.1e-122 444.1 299 77.9
Os04g0298200 Oryza sativa ssp. japonica HOM05D004748 ORTHO05D005825 1.4e-122 443.7 266 86.1
PSO017G2012 Papaver somniferum HOM05D004748 ORTHO05D005825 3.1e-122 442.6 257 84.8
PSO170G5564 Papaver somniferum HOM05D004748 ORTHO05D005825 3.1e-122 442.6 257 84.8
AT1G51610 Arabidopsis thaliana HOM05D004748 ORTHO05D005825 5.4e-122 441.8 323 72.4
Hma1.2p1_0517F.1_g170670 Hydrangea macrophylla HOM05D004748 ORTHO05D005825 7.0e-122 441.4 245 91.0
CDE04G0266 Ceratophyllum demersum HOM05D004748 ORTHO05D005825 9.1e-122 441.0 299 77.3
FvH4_6g37160 Fragaria vesca HOM05D004748 ORTHO05D005825 9.1e-122 441.0 283 80.2
FAN14G2305 Fragaria x ananassa HOM05D004748 ORTHO05D005825 9.1e-122 441.0 283 80.2
BcaC08g43922 Brassica carinata HOM05D004748 ORTHO05D005825 1.2e-121 440.7 283 80.6
BolC6t36471H Brassica oleracea HOM05D004748 ORTHO05D005825 1.2e-121 440.7 283 80.6
Ah.15g094390 Amaranthus hybridus HOM05D004748 ORTHO05D005825 1.6e-121 440.3 309 73.8
FAN05G0392 Fragaria x ananassa HOM05D004748 ORTHO05D005825 1.6e-121 440.3 283 79.9
FAN05G2438 Fragaria x ananassa HOM05D004748 ORTHO05D005825 1.6e-121 440.3 283 79.9
A06p02380 Brassica napus HOM05D004748 ORTHO05D005825 4.5e-121 438.7 263 83.7
C06p06730 Brassica napus HOM05D004748 ORTHO05D005825 5.9e-121 438.3 262 84.0
FAN09G1322 Fragaria x ananassa HOM05D004748 ORTHO05D005825 5.9e-121 438.3 283 79.5
Nn8g40686 Nelumbo nucifera HOM05D004748 ORTHO05D005825 1.0e-120 437.6 245 90.6
Medtr4g008150 Medicago truncatula HOM05D004748 ORTHO05D005825 2.9e-120 436.0 277 80.9
Hund18602 Selenicereus undatus HOM05D004748 ORTHO05D005825 6.5e-120 434.9 477 54.1
HPP92_026143 Vanilla planifolia HOM05D004748 ORTHO05D005825 1.9e-119 433.3 264 82.6
ATR0580G210 Amborella trichopoda HOM05D004748 ORTHO05D005825 1.6e-118 430.3 245 88.6
Zm00001eb086340 Zea mays HOM05D004748 ORTHO05D005825 8.0e-118 427.9 266 83.1
Atru.chr1.2705 Acer truncatum HOM05D004748 ORTHO05D005825 1.8e-117 426.8 299 74.9
MELO3C024289.2 Cucumis melo HOM05D004748 ORTHO05D005825 2.3e-117 426.4 297 75.8
Lj9C541G21 Lonicera japonica HOM05D004748 ORTHO05D001811 5.2e-117 425.2 331 70.1
Zm00001eb420390 Zea mays HOM05D004748 ORTHO05D005825 2.6e-116 422.9 266 82.0
A05p19500 Brassica napus HOM05D004748 ORTHO05D005825 1.4e-114 417.2 245 85.3
arahy.Tifrunner.gnm1.ann1.660VQ8 Arachis hypogaea HOM05D004748 ORTHO05D005825 1.0e-112 411.0 279 78.1
vmacro17059 Vaccinium macrocarpon HOM05D004748 ORTHO05D005825 2.9e-112 409.5 403 62.0
SGA_v2.0_scaffold71G24004 Striga asiatica HOM05D004748 ORTHO05D005825 2.5e-111 406.4 245 86.1
SHI31092 Sapria himalayana HOM05D004748 ORTHO05D005825 2.1e-110 403.3 244 83.6
Nitab4.5_0001691g0140 Nicotiana tabacum HOM05D004748 ORTHO05D005825 8.9e-109 397.9 279 72.0
arahy.Tifrunner.gnm1.ann1.2A2X48 Arachis hypogaea HOM05D004748 ORTHO05D005825 2.2e-107 393.3 274 76.6
Nitab4.5_0003757g0030 Nicotiana tabacum HOM05D004748 ORTHO05D005825 2.4e-106 389.8 358 60.9
SEGI_05538 Sequoiadendron giganteum HOM05D004748 ORTHO05D005825 2.4e-106 389.8 237 82.7
Nitab4.5_0002661g0120 Nicotiana tabacum HOM05D004748 ORTHO05D005825 3.0e-104 382.9 342 62.9
Duzib235G0633 Durio zibethinus HOM05D004748 ORTHO05D005825 4.7e-102 375.6 345 60.9
Lj5A24T50 Lonicera japonica HOM05D004748 ORTHO05D005825 1.2e-100 370.9 215 87.4
CAN.G308.5 Capsicum annuum HOM05D004748 ORTHO05D005825 2.0e-100 370.2 215 87.4
AagrBONN_evm.TU.Sc2ySwM_344.1578 Anthoceros agrestis HOM05D004748 ORTHO05D005825 4.4e-100 369.0 274 70.4
Mapoly0185s0006 Marchantia polymorpha HOM05D004748 ORTHO05D005825 1.7e-99 367.1 247 74.5
SMO228G0169 Selaginella moellendorffii HOM05D004748 ORTHO05D005825 1.1e-98 364.4 245 73.5
Hund05683 Selenicereus undatus HOM05D004748 ORTHO05D005825 1.2e-97 360.9 260 71.5
Oeu001810.2 Olea europaea HOM05D004748 ORTHO05D005825 1.0e-96 357.8 200 90.5
Cpa.g.sc67.6 Carica papaya HOM05D004748 ORTHO05D005825 1.1e-93 347.8 216 82.9
Peaxi162Scf00038g02524 Petunia axillaris HOM05D004748 ORTHO05D005825 1.1e-93 347.8 215 80.0
Pp3c20_1650 Physcomitrium patens HOM05D004748 ORTHO05D005825 9.9e-92 341.3 249 69.9
Haze_16292 Corylus avellana HOM05D004748 ORTHO05D005825 8.6e-88 328.2 208 79.8
Nitab4.5_0012506g0020 Nicotiana tabacum HOM05D004748 ORTHO05D005825 1.6e-86 323.9 200 80.0
FAN02G0724 Fragaria x ananassa HOM05D004748 ORTHO05D005825 3.7e-62 243.0 132 90.2
BcaB04g17188 Brassica carinata HOM05D001232 ORTHO05D001073 6.5e-51 205.7 222 56.8
MCO14G368 Micromonas commoda HOM05D004748 ORTHO05D005825 6.5e-51 205.7 228 47.4
Cre06.g289150 Chlamydomonas reinhardtii HOM05D004748 ORTHO05D005825 5.5e-50 202.6 241 45.2
Haze_26513 Corylus avellana HOM05D004748 ORTHO05D005825 1.5e-39 167.9 234 38.5
Actinidia00641 Actinidia chinensis HOM05D004748 ORTHO05D005825 3.3e-39 166.8 109 79.8
GSVIVG01029613001 Vitis vinifera HOM05D004748 ORTHO05D005825 7.4e-39 165.6 142 66.9
PRCOL_00004355 Prasinoderma coloniale HOM05D004748 ORTHO05D005825 9.1e-37 158.7 234 43.6
Haze_16294 Corylus avellana HOM05D004748 ORTHO05D005825 4.4e-31 139.8 79 87.3
SEGI_05879 Sequoiadendron giganteum HOM05D004748 ORTHO05D002681 6.3e-30 136.0 101 68.3
C06p13150 Brassica napus HOM05D004748 ORTHO05D005825 1.8e-29 134.4 87 80.5
FAN02G4052 Fragaria x ananassa HOM05D004748 ORTHO05D005825 6.5e-27 125.9 85 76.5
GSVIVG01029603001 Vitis vinifera HOM05D004748 ORTHO05D005825 3.2e-26 123.6 64 93.8
RcHm_v2.0_Chr1g0341791 Rosa chinensis HOM05D004748 ORTHO05D005825 7.7e-20 102.4 64 79.7
RcHm_v2.0_Chr7g0197681 Rosa chinensis HOM05D004748 ORTHO05D005825 1.3e-14 85.1 54 83.3
arahy.Tifrunner.gnm1.ann1.W4KKVA Arachis hypogaea HOM05D005785 ORTHO05D007962 4.8e-14 83.2 44 93.2
CAN.G126.34 Capsicum annuum HOM05D004748 ORTHO05D005825 4.8e-14 83.2 111 40.5
HanXRQChr12g0383231 Helianthus annuus HOM05D002835 ORTHO05D003008 7.2e-10 69.3 79 49.4
HanXRQChr10g0284771 Helianthus annuus HOM05D004748 ORTHO05D005825 1.2e-09 68.6 36 88.9
GSVIVG01029622001 Vitis vinifera HOM05D004748 ORTHO05D005825 1.6e-09 68.2 36 91.7
SEGI_11704 Sequoiadendron giganteum HOM05D004748 ORTHO05D006250 3.0e-08 63.9 37 78.4
arahy.Tifrunner.gnm1.ann1.SQ6FML Arachis hypogaea HOM05D000121 ORTHO05D031608 2.8e-06 57.4 40 80.0


User provided reference genes

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