Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20339 Davidia involucrata HOM05D008782 ORTHO05D010834 4.0e-84 314.7 157 100.0
Potri.008G005500 Populus trichocarpa HOM05D008782 ORTHO05D010834 3.4e-22 109.0 95 68.4
QL05p084042 Quercus lobata HOM05D008782 ORTHO05D010834 4.4e-22 108.6 98 65.3
CiPaw.01G090800 Carya illinoinensis HOM05D008782 ORTHO05D010834 4.8e-21 105.1 98 66.3
Prupe.3G022200 Prunus persica HOM05D008782 ORTHO05D010834 6.3e-21 104.8 94 64.9
RcHm_v2.0_Chr2g0149581 Rosa chinensis HOM05D008782 ORTHO05D010834 2.4e-20 102.8 95 66.3
vmacro18746 Vaccinium macrocarpon HOM05D008782 ORTHO05D010834 5.4e-20 101.7 103 61.2
Eucgr.J03178 Eucalyptus grandis HOM05D008782 ORTHO05D010834 5.9e-19 98.2 95 58.9
FAN09G0669 Fragaria x ananassa HOM05D008782 ORTHO05D010834 6.5e-18 94.7 96 63.5
CANSAT01G2312 Cannabis sativa HOM05D008782 ORTHO05D010834 1.1e-17 94.0 96 62.5
FvH4_6g37030 Fragaria vesca HOM05D008782 ORTHO05D010834 1.1e-17 94.0 96 62.5
FAN14G2086 Fragaria x ananassa HOM05D008782 ORTHO05D010834 1.1e-17 94.0 96 62.5
FAN05G3315 Fragaria x ananassa HOM05D008782 ORTHO05D010834 1.5e-17 93.6 96 62.5
arahy.Tifrunner.gnm1.ann1.L8JHJZ Arachis hypogaea HOM05D008782 ORTHO05D010834 1.2e-16 90.5 82 61.0
MD17G1163400 Malus domestica HOM05D008782 ORTHO05D010834 1.6e-16 90.1 104 56.7
Glyma.01G180300 Glycine max HOM05D008782 ORTHO05D010834 8.0e-16 87.8 90 56.7
TWI75G0399 Tripterygium wilfordii HOM05D008782 ORTHO05D010834 5.2e-15 85.1 100 56.0
Actinidia38806 Actinidia chinensis HOM05D008782 ORTHO05D010834 5.7e-14 81.6 99 55.6
Phvul.005G185200 Phaseolus vulgaris HOM05D008782 ORTHO05D010834 1.7e-13 80.1 92 54.3
Gohir.A05G114500 Gossypium hirsutum HOM05D008782 ORTHO05D010834 2.8e-13 79.3 97 52.6
Dinv37781 Davidia involucrata HOM05D008782 ORTHO05D010834 4.9e-13 78.6 111 50.5
TPR.G6524 Trifolium pratense HOM05D008782 ORTHO05D010834 6.3e-13 78.2 87 57.5
Glyma.13G372800 Glycine max HOM05D008782 ORTHO05D010834 2.4e-12 76.3 81 55.6
arahy.Tifrunner.gnm1.ann1.4RY61R Arachis hypogaea HOM05D008782 ORTHO05D010834 5.4e-12 75.1 82 53.7
Actinidia21883 Actinidia chinensis HOM05D008782 ORTHO05D010834 7.0e-12 74.7 119 48.7
AUR62025662 Chenopodium quinoa HOM05D008782 ORTHO05D010834 4.5e-11 72.0 91 50.5
Ciclev10027100m.g Citrus clementina HOM05D008782 ORTHO05D010834 1.3e-10 70.5 74 52.7
Cc04_g00190 Coffea canephora HOM05D008782 ORTHO05D010834 1.3e-10 70.5 88 58.0
TPR.G13074 Trifolium pratense HOM05D008782 ORTHO05D010834 2.9e-10 69.3 87 54.0
GSVIVG01029541001 Vitis vinifera HOM05D008782 ORTHO05D010834 6.6e-10 68.2 99 52.5
Potri.010G253001 Populus trichocarpa HOM05D008782 ORTHO05D010834 9.5e-09 64.3 91 54.9
PSO210G5676 Papaver somniferum HOM05D054354 ORTHO05D010834 1.2e-08 63.9 119 43.7
MD09G1164800 Malus domestica HOM05D008782 ORTHO05D010834 3.6e-08 62.4 95 47.4
Hund18597 Selenicereus undatus HOM05D007552 ORTHO05D009397 1.8e-07 60.1 83 47.0
Sabra08G0002800 Salix brachista HOM05D008782 ORTHO05D010834 2.3e-07 59.7 52 67.3
Cfa002152 Carpinus fangiana HOM05D008782 ORTHO05D010834 6.8e-07 58.2 52 67.3
COL.COLO4_31166 Corchorus olitorius HOM05D008782 ORTHO05D010834 8.9e-07 57.8 97 45.4
Manes.06G177200 Manihot esculenta HOM05D008782 ORTHO05D010834 1.2e-06 57.4 99 46.5
PGR102G3315 Punica granatum HOM05D008782 ORTHO05D010834 3.4e-06 55.8 55 54.5
CDE08G0130 Ceratophyllum demersum HOM05D008782 ORTHO05D010834 5.8e-06 55.1 97 37.1
Thecc.06G058700 Theobroma cacao HOM05D008782 ORTHO05D010834 7.5e-06 54.7 101 43.6


User provided reference genes

Program Settings