Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20313 Davidia involucrata HOM05D007341 ORTHO05D009075 8.7e-99 363.6 181 100.0
Hma1.2p1_0422F.1_g150100 Hydrangea macrophylla HOM05D007341 ORTHO05D009075 1.2e-52 210.3 180 63.3
QL05p085130 Quercus lobata HOM05D007341 ORTHO05D009075 8.3e-49 197.6 183 59.0
CiPaw.01G092200 Carya illinoinensis HOM05D007341 ORTHO05D009075 1.1e-48 197.2 126 80.2
Cfa002160 Carpinus fangiana HOM05D007341 ORTHO05D009075 3.1e-48 195.7 142 71.1
DCAR_027600 Daucus carota HOM05D007341 ORTHO05D009075 7.0e-48 194.5 155 61.9
Haze_16246 Corylus avellana HOM05D007341 ORTHO05D009075 1.2e-47 193.7 140 71.4
CSS0015626 Camellia sinensis var. sinensis HOM05D007341 ORTHO05D009075 2.0e-47 193.0 166 66.9
Prupe.3G028000 Prunus persica HOM05D007341 ORTHO05D009075 2.0e-47 193.0 191 59.7
MD09G1169800 Malus domestica HOM05D007341 ORTHO05D009075 2.3e-46 189.5 179 57.0
Solyc10g086470.2 Solanum lycopersicum HOM05D007341 ORTHO05D009075 3.8e-46 188.7 187 54.0
FAN09G2851 Fragaria x ananassa HOM05D007341 ORTHO05D009075 5.0e-46 188.3 167 61.7
Sopen10g035850 Solanum pennellii HOM05D007341 ORTHO05D009075 6.6e-46 188.0 180 56.1
TWI12G0959 Tripterygium wilfordii HOM05D007341 ORTHO05D009075 6.6e-46 188.0 122 75.4
PGSC0003DMG400019203 Solanum tuberosum HOM05D007341 ORTHO05D009075 8.6e-46 187.6 139 66.9
FvH4_6g36350 Fragaria vesca HOM05D007341 ORTHO05D009075 1.1e-45 187.2 136 66.9
Lsat_1_v5_gn_9_114620 Lactuca sativa HOM05D007341 ORTHO05D009075 1.1e-45 187.2 185 58.9
Duzib235G0177 Durio zibethinus HOM05D007341 ORTHO05D009075 1.5e-45 186.8 147 67.3
FAN02G2832 Fragaria x ananassa HOM05D007341 ORTHO05D009075 1.5e-45 186.8 136 66.9
Sabra07G0002700 Salix brachista HOM05D007341 ORTHO05D009075 2.5e-45 186.0 144 70.1
GSVIVG01029444001 Vitis vinifera HOM05D007341 ORTHO05D009075 2.5e-45 186.0 95 91.6
TAR636G1203 Trochodendron aralioides HOM05D007341 ORTHO05D009075 3.3e-45 185.7 121 77.7
RcHm_v2.0_Chr2g0148351 Rosa chinensis HOM05D007341 ORTHO05D009075 5.5e-45 184.9 167 61.1
Thecc.06G049400 Theobroma cacao HOM05D007341 ORTHO05D009075 5.5e-45 184.9 147 67.3
MELO3C019561.2 Cucumis melo HOM05D007341 ORTHO05D009075 9.5e-45 184.1 103 81.6
ECA240G2002 Erigeron canadensis HOM05D007341 ORTHO05D009075 2.1e-44 183.0 148 65.5
Nitab4.5_0000349g0220 Nicotiana tabacum HOM05D007341 ORTHO05D009075 2.1e-44 183.0 150 62.7
Sed0003722 Sechium edule HOM05D007341 ORTHO05D009075 4.7e-44 181.8 94 89.4
Cc06_g16890 Coffea canephora HOM05D007341 ORTHO05D009075 6.1e-44 181.4 125 74.4
CsaV3_3G018050 Cucumis sativus L. HOM05D007341 ORTHO05D009075 6.1e-44 181.4 94 89.4
HanXRQChr03g0072101 Helianthus annuus HOM05D007341 ORTHO05D009075 6.1e-44 181.4 97 86.6
Ciclev10029418m.g Citrus clementina HOM05D007341 ORTHO05D009075 1.4e-43 180.3 106 77.4
Gorai.009G121500 Gossypium raimondii HOM05D007341 ORTHO05D009075 2.3e-43 179.5 152 63.2
Gohir.A05G116700 Gossypium hirsutum HOM05D007341 ORTHO05D009075 3.0e-43 179.1 152 63.2
Gohir.D05G117600 Gossypium hirsutum HOM05D007341 ORTHO05D009075 6.8e-43 177.9 152 62.5
Eucgr.F04060 Eucalyptus grandis HOM05D007341 ORTHO05D009075 4.4e-42 175.3 141 63.1
Potri.007G003600 Populus trichocarpa HOM05D007341 ORTHO05D009075 9.8e-42 174.1 145 65.5
CANSAT01G1666 Cannabis sativa HOM05D007341 ORTHO05D009075 1.7e-41 173.3 97 80.4
THA.LOC104808109 Tarenaya hassleriana HOM05D007341 ORTHO05D009075 4.9e-41 171.8 122 69.7
PGR102G3137 Punica granatum HOM05D007341 ORTHO05D009075 6.3e-41 171.4 123 72.4
Migut.K00075 Erythranthe guttata HOM05D007341 ORTHO05D009075 8.3e-41 171.0 167 58.7
MSTRG.26115 Avicennia marina HOM05D007341 ORTHO05D009075 1.1e-40 170.6 109 77.1
Glyma.15G000400 Glycine max HOM05D007341 ORTHO05D009075 9.2e-40 167.5 125 68.8
Medtr6g004140 Medicago truncatula HOM05D007341 ORTHO05D009075 4.5e-39 165.2 114 68.4
unitig_748.g7237 Utricularia gibba HOM05D007341 ORTHO05D009075 7.8e-39 164.5 129 65.9
Aqoxy7G02561 Aquilegia oxysepala HOM05D007341 ORTHO05D009075 1.3e-38 163.7 134 62.7
Phvul.005G082000 Phaseolus vulgaris HOM05D007341 ORTHO05D009075 6.6e-38 161.4 144 59.7
CARHR072660 Cardamine hirsuta HOM05D007341 ORTHO05D009075 1.1e-37 160.6 147 59.9
BraA07t30379Z Brassica rapa HOM05D007341 ORTHO05D009075 1.5e-37 160.2 146 61.6
Sp5g34040 Schrenkiella parvula HOM05D007341 ORTHO05D009075 1.5e-37 160.2 154 58.4
A07p27380 Brassica napus HOM05D007341 ORTHO05D009075 2.5e-37 159.5 138 64.5
AT1G78995 Arabidopsis thaliana HOM05D007341 ORTHO05D009075 3.3e-37 159.1 137 65.0
Thhalv10019269m.g Eutrema salsugineum HOM05D007341 ORTHO05D009075 3.3e-37 159.1 152 58.6
Carub.0002s2586 Capsella rubella HOM05D007341 ORTHO05D009075 5.6e-37 158.3 146 59.6
BcaC08g45393 Brassica carinata HOM05D007341 ORTHO05D009075 7.3e-37 157.9 139 61.9
C06p30240 Brassica napus HOM05D007341 ORTHO05D009075 7.3e-37 157.9 139 61.9
BolC6t38187H Brassica oleracea HOM05D007341 ORTHO05D009075 7.3e-37 157.9 139 61.9
Lalb_Chr24g0392671 Lupinus albus HOM05D007341 ORTHO05D009075 7.3e-37 157.9 120 66.7
Actinidia38822 Actinidia chinensis HOM05D007341 ORTHO05D009075 9.5e-37 157.5 134 64.2
BcaB02g07190 Brassica carinata HOM05D007341 ORTHO05D009075 3.6e-36 155.6 138 63.0
CDE05G1356 Ceratophyllum demersum HOM05D007341 ORTHO05D009075 3.6e-36 155.6 94 77.7
HPP92_026441 Vanilla planifolia HOM05D007341 ORTHO05D009075 8.0e-36 154.5 132 59.1
ATR0626G096 Amborella trichopoda HOM05D007341 ORTHO05D009075 1.4e-35 153.7 97 76.3
Nitab4.5_0001911g0010 Nicotiana tabacum HOM05D007341 ORTHO05D009075 1.4e-35 153.7 173 50.9
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 1.8e-35 153.3 124 66.1
SGA_v2.0_scaffold94G28462 Striga asiatica HOM05D007341 ORTHO05D009075 1.8e-35 153.3 108 70.4
AL2G39450 Arabidopsis lyrata HOM05D007341 ORTHO05D009075 3.1e-35 152.5 136 61.8
Nn8g41280 Nelumbo nucifera HOM05D007341 ORTHO05D009075 1.2e-34 150.6 162 51.2
AUR62001305 Chenopodium quinoa HOM05D007341 ORTHO05D009075 2.0e-34 149.8 132 63.6
AUR62025687 Chenopodium quinoa HOM05D007341 ORTHO05D009075 2.6e-34 149.4 133 62.4
Pp3c15_22740 Physcomitrium patens HOM05D007341 ORTHO05D009075 5.8e-34 148.3 114 60.5
EL10Ac7g18105 Beta vulgaris HOM05D007341 ORTHO05D009075 3.7e-33 145.6 155 54.2
Hund18551 Selenicereus undatus HOM05D007341 ORTHO05D009075 3.7e-33 145.6 97 72.2
Mapoly0061s0126 Marchantia polymorpha HOM05D007341 ORTHO05D009075 1.1e-32 144.1 128 59.4
ClCG05G010440 Citrullus lanatus HOM05D007341 ORTHO05D009075 2.4e-32 142.9 86 77.9
FAN14G2925 Fragaria x ananassa HOM05D007341 ORTHO05D009075 3.2e-32 142.5 136 55.9
FAN14G4935 Fragaria x ananassa HOM05D007341 ORTHO05D009075 3.2e-32 142.5 136 55.9
DCAR_011722 Daucus carota HOM05D007341 ORTHO05D009075 4.1e-32 142.1 182 46.2
Zm00001eb227230 Zea mays HOM05D007341 ORTHO05D009075 5.4e-32 141.7 119 58.8
Cpa.g.sc4293.1 Carica papaya HOM05D007341 ORTHO05D009075 9.2e-32 141.0 75 85.3
PSO170G4447 Papaver somniferum HOM05D007341 ORTHO05D009075 9.2e-32 141.0 129 59.7
PSO063G2737 Papaver somniferum HOM05D007341 ORTHO05D009075 6.0e-31 138.3 127 59.1
VMungo1080G1509 Vigna mungo HOM05D007341 ORTHO05D009075 1.3e-30 137.1 113 64.6
SMO232G0085 Selaginella moellendorffii HOM05D007341 ORTHO05D009075 1.7e-30 136.7 123 56.1
Sc16g0003760 Simmondsia chinensis HOM05D007341 ORTHO05D009075 1.6e-28 130.2 82 80.5
Os06g0704200 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 3.6e-28 129.0 121 57.9
Sabra14G0002900 Salix brachista HOM05D007341 ORTHO05D009075 2.4e-24 116.3 90 63.3
Peaxi162Scf00330g00029 Petunia axillaris HOM05D007341 ORTHO05D009075 4.1e-24 115.5 151 49.7
Oeu004021.1 Olea europaea HOM05D007341 ORTHO05D009075 5.4e-24 115.2 88 72.7
Rhsim08G0252300 Rhododendron simsii HOM05D000912 ORTHO05D009075 2.7e-23 112.8 113 66.4
vmacro18722 Vaccinium macrocarpon HOM05D007341 ORTHO05D009075 3.0e-22 109.4 110 61.8
Manes.06G177800 Manihot esculenta HOM05D007341 ORTHO05D009075 8.6e-22 107.8 112 55.4
C02p36120 Brassica napus HOM05D007341 ORTHO05D009075 1.5e-21 107.1 66 75.8
SalBow1G8719 Salvia bowleyana HOM05D007341 ORTHO05D009075 4.3e-21 105.5 110 54.5
SalBow1G7986 Salvia bowleyana HOM05D007341 ORTHO05D009075 3.6e-20 102.4 87 62.1
Lj9A544T49 Lonicera japonica HOM05D007341 ORTHO05D009075 1.8e-19 100.1 86 66.3
Cre01.g000800 Chlamydomonas reinhardtii HOM05D007341 ORTHO05D009075 6.8e-19 98.2 117 39.3
Psat6g000680 Pisum sativum HOM05D007341 ORTHO05D009075 6.8e-19 98.2 143 46.9
Aa31LG4G1990 Aethionema arabicum HOM05D007341 ORTHO05D009075 5.8e-18 95.1 130 51.5
Os02g0138100 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 8.3e-17 91.3 81 56.8
MCO04G269 Micromonas commoda HOM05D007341 ORTHO05D009075 4.1e-16 89.0 118 39.0
MBI13_g34919_MAGBIO Magnolia biondii HOM05D007341 ORTHO05D009075 1.2e-15 87.4 81 64.2
AagrBONN_evm.TU.Sc2ySwM_368.1307 Anthoceros agrestis HOM05D007341 ORTHO05D009075 1.1e-13 80.9 61 63.9
Ah.08g218010 Amaranthus hybridus HOM05D007341 ORTHO05D009075 3.6e-12 75.9 122 44.3
PRCOL_00000561 Prasinoderma coloniale HOM05D007341 ORTHO05D009075 1.3e-09 67.4 161 31.7
Zm00001eb231900 Zea mays HOM05D007341 ORTHO05D009075 3.8e-09 65.9 115 36.5


User provided reference genes

Program Settings