Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20308 Davidia involucrata HOM05D006072 ORTHO05D007363 3.1e-75 285.0 144 100.0
Dinv07032 Davidia involucrata HOM05D006072 ORTHO05D007363 5.8e-37 157.9 104 81.7
Hma1.2p1_0523F.1_g172190 Hydrangea macrophylla HOM05D006072 ORTHO05D007363 1.7e-28 129.8 105 67.6
Dinv16779 Davidia involucrata HOM05D006072 ORTHO05D007363 6.0e-26 121.3 106 63.2
Actinidia24189 Actinidia chinensis HOM05D006072 ORTHO05D007363 7.8e-26 120.9 105 63.8
CSS0011017 Camellia sinensis var. sinensis HOM05D006072 ORTHO05D007363 3.0e-25 119.0 106 66.0
Dinv12556 Davidia involucrata HOM05D006072 ORTHO05D007363 1.6e-23 113.2 95 65.3
Oeu025733.1 Olea europaea HOM05D006072 ORTHO05D007363 6.2e-23 111.3 109 61.5
GSVIVG01011561001 Vitis vinifera HOM05D006072 ORTHO05D007363 8.1e-23 110.9 107 56.1
GSVIVG01011560001 Vitis vinifera HOM05D006072 ORTHO05D007363 1.1e-22 110.5 110 57.3
GSVIVG01011570001 Vitis vinifera HOM05D006072 ORTHO05D007363 1.4e-22 110.2 107 55.1
Actinidia12426 Actinidia chinensis HOM05D006072 ORTHO05D007363 1.2e-21 107.1 87 63.2
TAR629G3443 Trochodendron aralioides HOM05D006072 ORTHO05D007363 2.0e-21 106.3 110 56.4
Sc18g0004880 Simmondsia chinensis HOM05D006072 ORTHO05D007363 9.9e-21 104.0 103 59.2
TAR622G0191 Trochodendron aralioides HOM05D006072 ORTHO05D007363 2.2e-20 102.8 114 53.5
Manes.12G138600 Manihot esculenta HOM05D006072 ORTHO05D007363 3.8e-20 102.1 96 53.1
Nn3g18504 Nelumbo nucifera HOM05D006072 ORTHO05D007363 3.8e-20 102.1 110 51.8
CSS0004323 Camellia sinensis var. sinensis HOM05D006072 ORTHO05D007363 6.4e-20 101.3 157 43.9
AUR62017790 Chenopodium quinoa HOM05D006072 ORTHO05D007363 8.4e-20 100.9 103 51.5
MBI19_g02922_MAGBIO Magnolia biondii HOM05D006072 ORTHO05D007363 8.4e-20 100.9 87 60.9
Ah.14g079100 Amaranthus hybridus HOM05D006072 ORTHO05D007363 1.1e-19 100.5 135 43.0
AUR62003481 Chenopodium quinoa HOM05D006072 ORTHO05D007363 1.1e-19 100.5 103 52.4
AUR62015493 Chenopodium quinoa HOM05D006072 ORTHO05D007363 1.1e-19 100.5 135 43.7
SalBow4G0595 Salvia bowleyana HOM05D006072 ORTHO05D007363 1.1e-19 100.5 115 53.0
AUR62002207 Chenopodium quinoa HOM05D006072 ORTHO05D007363 1.4e-19 100.1 135 43.7
Ca_17713_v3 Cicer arietinum L. HOM05D006072 ORTHO05D007363 2.4e-19 99.4 88 56.8
Glyma.08G139000 Glycine max HOM05D006072 ORTHO05D007363 3.2e-19 99.0 88 56.8
QL06p050421 Quercus lobata HOM05D006072 ORTHO05D007363 3.2e-19 99.0 113 50.4
VMungo0251G2066 Vigna mungo HOM05D006072 ORTHO05D007363 3.2e-19 99.0 89 56.2
EL10Ac1g00741 Beta vulgaris HOM05D006072 ORTHO05D007363 4.2e-19 98.6 103 52.4
Rhsim09G0083300 Rhododendron simsii HOM05D006072 ORTHO05D007363 5.4e-19 98.2 104 54.8
Nitab4.5_0004318g0070 Nicotiana tabacum HOM05D006072 ORTHO05D007363 7.1e-19 97.8 108 55.6
Phvul.002G262300 Phaseolus vulgaris HOM05D006072 ORTHO05D007363 7.1e-19 97.8 89 55.1
Lj4g0019082 Lotus japonicus HOM05D006072 ORTHO05D007363 9.3e-19 97.4 95 53.7
Peaxi162Scf00003g00145 Petunia axillaris HOM05D006072 ORTHO05D007363 9.3e-19 97.4 100 53.0
Potri.005G079500 Populus trichocarpa HOM05D006072 ORTHO05D007363 9.3e-19 97.4 88 56.8
Haze_24990 Corylus avellana HOM05D006072 ORTHO05D007363 1.2e-18 97.1 109 50.5
Nitab4.5_0000876g0020 Nicotiana tabacum HOM05D006072 ORTHO05D007363 1.2e-18 97.1 114 51.8
Sabra07G0072700 Salix brachista HOM05D006072 ORTHO05D007363 2.7e-18 95.9 88 55.7
TPR.G2161 Trifolium pratense HOM05D006072 ORTHO05D007363 2.7e-18 95.9 88 54.5
Ciclev10025690m.g Citrus clementina HOM05D006072 ORTHO05D007363 3.5e-18 95.5 114 49.1
Gorai.007G241900 Gossypium raimondii HOM05D006072 ORTHO05D007363 3.5e-18 95.5 143 40.6
DCAR_023269 Daucus carota HOM05D006072 ORTHO05D007363 4.6e-18 95.1 110 50.0
Glyma.05G181300 Glycine max HOM05D006072 ORTHO05D007363 4.6e-18 95.1 88 54.5
Nitab4.5_0006309g0060 Nicotiana tabacum HOM05D006072 ORTHO05D007363 4.6e-18 95.1 108 55.6
SalBow3G0772 Salvia bowleyana HOM05D006072 ORTHO05D007363 4.6e-18 95.1 96 52.1
Migut.D00310 Erythranthe guttata HOM05D006072 ORTHO05D007363 6.0e-18 94.7 111 55.0
Medtr8g092370 Medicago truncatula HOM05D006072 ORTHO05D007363 6.0e-18 94.7 88 53.4
Medtr8g092700 Medicago truncatula HOM05D006072 ORTHO05D007363 6.0e-18 94.7 88 53.4
SGA_v2.0_scaffold55G19813 Striga asiatica HOM05D006072 ORTHO05D007363 6.0e-18 94.7 102 52.9
Cfa002714 Carpinus fangiana HOM05D006072 ORTHO05D007363 7.8e-18 94.4 109 47.7
Peaxi162Scf00003g00149 Petunia axillaris HOM05D006072 ORTHO05D007363 7.8e-18 94.4 102 52.0
ECA246G2885 Erigeron canadensis HOM05D006072 ORTHO05D007363 1.0e-17 94.0 87 55.2
Gohir.D12G095100 Gossypium hirsutum HOM05D006072 ORTHO05D007363 1.0e-17 94.0 144 41.7
Lalb_Chr12g0203671 Lupinus albus HOM05D006072 ORTHO05D007363 1.0e-17 94.0 118 46.6
Medtr8g091400 Medicago truncatula HOM05D006072 ORTHO05D007363 1.0e-17 94.0 88 52.3
Psat7g053120 Pisum sativum HOM05D006072 ORTHO05D007363 1.0e-17 94.0 88 52.3
Gohir.D11G224600 Gossypium hirsutum HOM05D006072 ORTHO05D007363 1.3e-17 93.6 143 39.9
Gorai.008G103500 Gossypium raimondii HOM05D006072 ORTHO05D007363 1.3e-17 93.6 116 47.4
Rhsim09G0083000 Rhododendron simsii HOM05D006072 ORTHO05D007363 1.3e-17 93.6 87 58.6
Gohir.A11G199500 Gossypium hirsutum HOM05D006072 ORTHO05D007363 1.7e-17 93.2 143 39.2
Cc01_g19360 Coffea canephora HOM05D006072 ORTHO05D007363 2.3e-17 92.8 107 48.6
CiPaw.03G138500 Carya illinoinensis HOM05D006072 ORTHO05D007363 3.0e-17 92.4 148 39.9
Gohir.A12G093200 Gossypium hirsutum HOM05D006072 ORTHO05D007363 3.0e-17 92.4 116 46.6
Lalb_Chr07g0184981 Lupinus albus HOM05D006072 ORTHO05D007363 3.9e-17 92.0 117 44.4
Rhsim13G0107200 Rhododendron simsii HOM05D006072 ORTHO05D007363 3.9e-17 92.0 105 49.5
Oeu007228.1 Olea europaea HOM05D006072 ORTHO05D007363 5.1e-17 91.7 109 53.2
PGR083G2817 Punica granatum HOM05D006072 ORTHO05D007363 5.1e-17 91.7 92 50.0
Actinidia07224 Actinidia chinensis HOM05D006072 ORTHO05D007363 6.6e-17 91.3 86 62.8
CANSAT01G0770 Cannabis sativa HOM05D006072 ORTHO05D007363 6.6e-17 91.3 99 50.5
CAN.G1.46 Capsicum annuum HOM05D006072 ORTHO05D007363 6.6e-17 91.3 117 47.9
Sopen10g022790 Solanum pennellii HOM05D006072 ORTHO05D007363 6.6e-17 91.3 117 47.0
Atru.chr4.239 Acer truncatum HOM05D006072 ORTHO05D007363 8.7e-17 90.9 111 46.8
Lsat_1_v5_gn_3_92501 Lactuca sativa HOM05D006072 ORTHO05D007363 8.7e-17 90.9 87 52.9
Medtr4g075230 Medicago truncatula HOM05D006072 ORTHO05D007363 1.1e-16 90.5 88 51.1
Duzib187G0709 Durio zibethinus HOM05D006072 ORTHO05D007363 1.9e-16 89.7 88 48.9
Solyc10g051090.3 Solanum lycopersicum HOM05D006072 ORTHO05D007363 1.9e-16 89.7 117 46.2
Sopen09g027060 Solanum pennellii HOM05D006072 ORTHO05D007363 1.9e-16 89.7 109 54.1
Ah.09g224330 Amaranthus hybridus HOM05D006072 ORTHO05D007363 2.5e-16 89.4 103 46.6
Dinv07189 Davidia involucrata HOM05D006072 ORTHO05D007363 2.5e-16 89.4 65 73.8
Cc02_g18000 Coffea canephora HOM05D006072 ORTHO05D007363 3.3e-16 89.0 106 51.9
HPP92_004203 Vanilla planifolia HOM05D006072 ORTHO05D007363 3.3e-16 89.0 85 52.9
Duzib147G1157 Durio zibethinus HOM05D006072 ORTHO05D007363 4.3e-16 88.6 113 43.4
Migut.N01215 Erythranthe guttata HOM05D006072 ORTHO05D007363 4.3e-16 88.6 102 50.0
Eucgr.H00590 Eucalyptus grandis HOM05D006072 ORTHO05D007363 4.3e-16 88.6 109 45.9
Thecc.01G107000 Theobroma cacao HOM05D006072 ORTHO05D007363 4.3e-16 88.6 113 45.1
Cpa.g.sc131.23 Carica papaya HOM05D006072 ORTHO05D007363 5.6e-16 88.2 96 47.9
SGA_v2.0_scaffold138G35329 Striga asiatica HOM05D000358 ORTHO05D007363 9.6e-16 87.4 115 48.7
ATR0598G256 Amborella trichopoda HOM05D006072 ORTHO05D007363 1.3e-15 87.0 85 52.9
Peaxi162Scf00641g00039 Petunia axillaris HOM05D006072 ORTHO05D007363 2.1e-15 86.3 107 47.7
PGSC0003DMG400019330 Solanum tuberosum HOM05D006072 ORTHO05D007363 2.8e-15 85.9 109 51.4
CAN.G3.7 Capsicum annuum HOM05D006072 ORTHO05D007363 1.1e-14 84.0 109 49.5
Ah.14g079240 Amaranthus hybridus HOM05D006072 ORTHO05D007363 1.4e-14 83.6 93 41.9
Peaxi162Scf00003g01433 Petunia axillaris HOM05D005785 ORTHO05D007962 1.4e-14 83.6 90 51.1
Rhsim09G0083400 Rhododendron simsii HOM05D006072 ORTHO05D007363 1.4e-14 83.6 104 48.1
ATR0598G294 Amborella trichopoda HOM05D006072 ORTHO05D007363 6.9e-14 81.3 127 40.9
Solyc09g065320.3 Solanum lycopersicum HOM05D006072 ORTHO05D007363 2.0e-13 79.7 97 52.6
Lsat_1_v5_gn_5_36701 Lactuca sativa HOM05D006072 ORTHO05D007363 4.5e-13 78.6 106 43.4
PGR083G1472 Punica granatum HOM05D006072 ORTHO05D007363 2.9e-12 75.9 90 44.4
ATR0598G249 Amborella trichopoda HOM05D006072 ORTHO05D007363 8.4e-12 74.3 85 49.4
ATR0598G193 Amborella trichopoda HOM05D006072 ORTHO05D007363 2.4e-11 72.8 102 41.2
Os02g0491300 Oryza sativa ssp. japonica HOM05D006072 ORTHO05D007363 2.4e-11 72.8 88 45.5
arahy.Tifrunner.gnm1.ann1.78KFMW Arachis hypogaea HOM05D006072 ORTHO05D007363 4.6e-10 68.6 93 47.3
arahy.Tifrunner.gnm1.ann1.G5ZNF6 Arachis hypogaea HOM05D006072 ORTHO05D007363 4.6e-10 68.6 93 47.3
arahy.Tifrunner.gnm1.ann1.U641A1 Arachis hypogaea HOM05D006072 ORTHO05D007363 4.6e-10 68.6 93 47.3
arahy.Tifrunner.gnm1.ann1.W4NXZ5 Arachis hypogaea HOM05D006072 ORTHO05D007363 4.6e-10 68.6 93 47.3
Hma1.2p1_0281F.1_g113250 Hydrangea macrophylla HOM05D006072 ORTHO05D007363 4.6e-10 68.6 53 64.2
Phvul.011G140200 Phaseolus vulgaris HOM05D006072 ORTHO05D007363 1.8e-06 56.6 75 46.7


User provided reference genes

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