Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20277 Davidia involucrata HOM05D007170 ORTHO05D009243 0.0e+00 1548.1 813 100.0
Actinidia06806 Actinidia chinensis HOM05D007170 ORTHO05D009243 0.0e+00 1155.2 823 73.8
Cfa020492 Carpinus fangiana HOM05D007170 ORTHO05D009243 0.0e+00 1103.6 827 71.1
TAR626G1158 Trochodendron aralioides HOM05D007170 ORTHO05D009243 0.0e+00 1097.8 754 75.5
Prupe.3G191100 Prunus persica HOM05D007170 ORTHO05D009243 0.0e+00 1083.9 828 70.3
Haze_09546 Corylus avellana HOM05D007170 ORTHO05D009243 1.1e-307 1059.7 768 72.3
Potri.006G023500 Populus trichocarpa HOM05D007170 ORTHO05D009243 2.6e-307 1058.5 829 69.1
MD09G1135500 Malus domestica HOM05D007170 ORTHO05D009243 9.7e-307 1056.6 827 68.6
Duzib138G0290 Durio zibethinus HOM05D007170 ORTHO05D009243 2.2e-306 1055.4 824 68.8
Sabra06G0017000 Salix brachista HOM05D007170 ORTHO05D009243 7.7e-304 1047.0 832 67.9
Nitab4.5_0002247g0080 Nicotiana tabacum HOM05D007170 ORTHO05D009243 1.7e-303 1045.8 834 66.9
GSVIVG01020797001 Vitis vinifera HOM05D007170 ORTHO05D009243 1.7e-303 1045.8 826 70.3
RcHm_v2.0_Chr2g0154431 Rosa chinensis HOM05D007170 ORTHO05D009243 8.5e-303 1043.5 754 72.3
FvH4_6g39900 Fragaria vesca HOM05D007170 ORTHO05D009243 3.2e-302 1041.6 754 71.9
CANSAT64G1590 Cannabis sativa HOM05D007170 ORTHO05D009243 7.2e-302 1040.4 832 67.4
Nn3g20634 Nelumbo nucifera HOM05D007170 ORTHO05D009243 9.4e-302 1040.0 756 72.0
FAN02G4004 Fragaria x ananassa HOM05D007170 ORTHO05D009243 3.6e-301 1038.1 831 69.3
FAN14G4936 Fragaria x ananassa HOM05D007170 ORTHO05D009243 6.7e-300 1033.9 848 67.2
CiPaw.03G198500 Carya illinoinensis HOM05D007170 ORTHO05D009243 3.3e-299 1031.6 756 71.6
DCAR_006644 Daucus carota HOM05D007170 ORTHO05D009243 3.5e-296 1021.5 831 64.7
HanXRQChr10g0314771 Helianthus annuus HOM05D007170 ORTHO05D009243 1.7e-295 1019.2 811 67.1
Ciclev10010909m.g Citrus clementina HOM05D007170 ORTHO05D009243 2.9e-295 1018.5 824 66.0
Sopen01g040790 Solanum pennellii HOM05D007170 ORTHO05D009243 3.2e-294 1015.0 825 65.2
Solyc01g097110.2 Solanum lycopersicum HOM05D007170 ORTHO05D009243 2.1e-293 1012.3 825 65.1
Lsat_1_v5_gn_2_66140 Lactuca sativa HOM05D007170 ORTHO05D009243 2.7e-293 1011.9 829 65.9
Oeu038464.1 Olea europaea HOM05D007170 ORTHO05D009243 2.0e-291 1005.7 878 62.0
Gohir.D07G192100 Gossypium hirsutum HOM05D007170 ORTHO05D009243 3.3e-291 1005.0 805 67.3
Atru.chr8.950 Acer truncatum HOM05D007170 ORTHO05D009243 2.8e-290 1001.9 825 66.2
Peaxi162Scf00647g00012 Petunia axillaris HOM05D007170 ORTHO05D009243 1.4e-289 999.6 853 63.5
Manes.09G075018 Manihot esculenta HOM05D007170 ORTHO05D009243 5.3e-289 997.7 835 63.8
Gorai.001G214900 Gossypium raimondii HOM05D007170 ORTHO05D009243 1.2e-288 996.5 805 67.2
Migut.B01114 Erythranthe guttata HOM05D007170 ORTHO05D009243 8.5e-287 990.3 821 66.0
PGR031G3275 Punica granatum HOM05D007170 ORTHO05D009243 2.7e-285 985.3 825 64.0
Sc07g0002130 Simmondsia chinensis HOM05D007170 ORTHO05D009243 2.7e-285 985.3 760 67.5
MBI02_g15149_MAGBIO Magnolia biondii HOM05D007170 ORTHO05D009243 4.7e-285 984.6 759 68.2
Cc02_g31000 Coffea canephora HOM05D007170 ORTHO05D009243 1.5e-283 979.5 757 67.4
Nitab4.5_0005905g0020 Nicotiana tabacum HOM05D007170 ORTHO05D009243 3.5e-280 968.4 824 63.6
Eucgr.A00891 Eucalyptus grandis HOM05D007170 ORTHO05D009243 3.8e-279 964.9 797 68.0
SGA_v2.0_scaffold172G38980 Striga asiatica HOM05D007170 ORTHO05D009243 2.8e-274 948.7 818 62.7
PSO675G2674 Papaver somniferum HOM05D007170 ORTHO05D009243 7.3e-270 934.1 760 64.6
Thecc.01G177100 Theobroma cacao HOM05D007170 ORTHO05D009243 2.1e-269 932.6 690 71.0
Aqoxy3G00362 Aquilegia oxysepala HOM05D007170 ORTHO05D009243 2.8e-269 932.2 758 65.0
Lj7A482G28 Lonicera japonica HOM05D007170 ORTHO05D009243 6.1e-269 931.0 760 66.3
Thhalv10024215m.g Eutrema salsugineum HOM05D007170 ORTHO05D009243 8.0e-269 930.6 767 63.8
AL7G40850 Arabidopsis lyrata HOM05D007170 ORTHO05D009243 6.8e-268 927.5 764 64.0
BcaB04g18275 Brassica carinata HOM05D007170 ORTHO05D009243 2.2e-266 922.5 765 63.3
PSO541G2476 Papaver somniferum HOM05D007170 ORTHO05D009243 1.4e-265 919.8 823 60.9
A08p11580 Brassica napus HOM05D007170 ORTHO05D009243 3.2e-265 918.7 756 63.9
BraA08t33150Z Brassica rapa HOM05D007170 ORTHO05D009243 4.6e-264 914.8 756 63.8
BcaC07g37864 Brassica carinata HOM05D007170 ORTHO05D009243 7.8e-264 914.1 760 62.9
BolC8t48255H Brassica oleracea HOM05D007170 ORTHO05D009243 1.0e-263 913.7 761 62.8
AT4G14970 Arabidopsis thaliana HOM05D007170 ORTHO05D009243 1.1e-262 910.2 764 63.1
SalBow8G4071 Salvia bowleyana HOM05D007170 ORTHO05D009243 6.4e-258 894.4 879 56.7
ATR1098G002 Amborella trichopoda HOM05D007170 ORTHO05D009243 2.1e-248 862.8 762 58.9
Hma1.2p1_0892F.1_g233440 Hydrangea macrophylla HOM05D007170 ORTHO05D009243 1.7e-239 833.2 551 79.5
ECA238G4341 Erigeron canadensis HOM05D007170 ORTHO05D009243 2.4e-236 822.8 632 68.5
CSS0034103 Camellia sinensis var. sinensis HOM05D007170 ORTHO05D009243 1.6e-229 800.0 524 78.8
Os07g0154400 Oryza sativa ssp. japonica HOM05D007170 ORTHO05D009243 2.7e-224 782.7 757 54.8
CSS0006494 Camellia sinensis var. sinensis HOM05D007170 ORTHO05D009243 3.2e-217 759.2 498 79.7
Zm00001eb117500 Zea mays HOM05D007170 ORTHO05D009243 3.1e-212 742.7 783 52.7
CSS0002264 Camellia sinensis var. sinensis HOM05D007170 ORTHO05D009243 1.5e-206 723.8 497 76.5
HPP92_019550 Vanilla planifolia HOM05D007170 ORTHO05D009243 6.5e-202 708.4 682 56.6
CAN.G134.71 Capsicum annuum HOM05D007170 ORTHO05D009243 1.9e-193 680.2 540 67.2
Pp3c3_20180 Physcomitrium patens HOM05D007170 ORTHO05D009243 1.6e-171 607.4 763 45.1
Mapoly0001s0378 Marchantia polymorpha HOM05D007170 ORTHO05D009243 2.7e-171 606.7 766 45.7
Cpa.g.sc8.299 Carica papaya HOM05D007170 ORTHO05D009243 1.5e-169 600.9 750 48.8
SEGI_23823 Sequoiadendron giganteum HOM05D007170 ORTHO05D009243 2.8e-152 543.5 541 52.1
CBR_g3147 Chara braunii HOM05D007170 ORTHO05D009243 2.0e-147 527.3 767 38.6
CARHR221630 Cardamine hirsuta HOM05D007170 ORTHO05D009243 4.9e-141 506.1 407 66.3
AagrBONN_evm.TU.Sc2ySwM_344.1322 Anthoceros agrestis HOM05D007170 ORTHO05D009243 1.0e-93 349.0 493 39.1
Gohir.A07G185500 Gossypium hirsutum HOM05D007170 ORTHO05D009243 6.7e-90 336.3 236 69.9
SEGI_21897 Sequoiadendron giganteum HOM05D007170 ORTHO05D009243 1.0e-53 216.1 220 54.5
QL08p022040 Quercus lobata HOM05D007170 ORTHO05D009243 1.6e-46 192.2 205 52.7
CARHR221640 Cardamine hirsuta HOM05D007170 ORTHO05D009243 1.0e-45 189.5 140 66.4
CDE07G1176 Ceratophyllum demersum HOM05D007170 ORTHO05D009243 3.6e-43 181.0 149 65.8
Cpa.g.sc8.300 Carica papaya HOM05D007170 ORTHO05D009243 6.8e-42 176.8 155 61.3
QL02p039588 Quercus lobata HOM05D007170 ORTHO05D009243 3.9e-21 107.8 117 53.0
MBI08_g17991_MAGBIO Magnolia biondii HOM05D007170 ORTHO05D009243 2.1e-19 102.1 83 65.1
Carub.0007s2712 Capsella rubella HOM05D007170 ORTHO05D009243 3.1e-18 98.2 69 69.6
CAN.G134.69 Capsicum annuum HOM05D007170 ORTHO05D009243 2.4e-10 72.0 93 45.2
Cre10.g453650 Chlamydomonas reinhardtii HOM05D007170 ORTHO05D009243 5.8e-09 67.4 265 24.5
HPP92_019551 Vanilla planifolia HOM05D007170 ORTHO05D009243 2.2e-08 65.5 50 60.0
CDE07G0977 Ceratophyllum demersum HOM05D007170 ORTHO05D009243 8.4e-08 63.5 64 53.1
TAR365G0197 Trochodendron aralioides HOM05D000751 ORTHO05D000889 1.1e-07 63.2 46 69.6


User provided reference genes

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