Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20263 Davidia involucrata HOM05D007217 ORTHO05D009092 2.2e-134 482.3 240 100.0
Rhsim09G0182200 Rhododendron simsii HOM05D007217 ORTHO05D009092 3.8e-49 199.1 138 71.7
Rhsim02G0191400 Rhododendron simsii HOM05D007217 ORTHO05D009092 1.2e-47 194.1 137 70.1
Dinv01436 Davidia involucrata HOM05D007217 ORTHO05D009092 8.4e-41 171.4 95 90.5
Rhsim04G0112200 Rhododendron simsii HOM05D007217 ORTHO05D009092 8.4e-41 171.4 156 59.6
PGSC0003DMG400021318 Solanum tuberosum HOM05D007217 ORTHO05D009092 3.3e-37 159.5 140 56.4
Sopen01g003160 Solanum pennellii HOM05D007217 ORTHO05D009092 5.6e-37 158.7 141 56.7
Peaxi162Scf00586g00008 Petunia axillaris HOM05D007217 ORTHO05D009092 1.3e-36 157.5 146 57.5
Rhsim05G0134700 Rhododendron simsii HOM05D007217 ORTHO05D009092 3.7e-36 156.0 120 67.5
Solyc01g007180.3 Solanum lycopersicum HOM05D007217 ORTHO05D009092 4.8e-36 155.6 133 57.1
GSVIVG01019606001 Vitis vinifera HOM05D007217 ORTHO05D009092 1.8e-35 153.7 137 56.9
MSTRG.12451 Avicennia marina HOM05D007217 ORTHO05D009092 2.6e-34 149.8 145 52.4
Atru.chr10.619 Acer truncatum HOM05D007217 ORTHO05D009092 8.4e-33 144.8 125 64.8
Migut.N02356 Erythranthe guttata HOM05D007217 ORTHO05D009092 7.1e-32 141.7 140 52.9
Cc01_g06080 Coffea canephora HOM05D007217 ORTHO05D009092 9.3e-32 141.4 143 51.7
TAR722G0002 Trochodendron aralioides HOM05D007217 ORTHO05D009092 1.2e-31 141.0 137 54.0
Duzib235G1460 Durio zibethinus HOM05D007217 ORTHO05D009092 2.7e-31 139.8 142 54.2
CiPaw.10G112300 Carya illinoinensis HOM05D007217 ORTHO05D009092 3.5e-31 139.4 121 60.3
RcHm_v2.0_Chr5g0019241 Rosa chinensis HOM05D007217 ORTHO05D009092 4.6e-31 139.0 136 51.5
Thecc.06G135800 Theobroma cacao HOM05D007217 ORTHO05D009092 3.0e-30 136.3 135 53.3
Manes.02G204000 Manihot esculenta HOM05D007217 ORTHO05D009092 8.7e-30 134.8 133 50.4
FvH4_3g11820 Fragaria vesca HOM05D007217 ORTHO05D009092 1.5e-29 134.0 136 50.7
Sabra01G0058500 Salix brachista HOM05D007217 ORTHO05D009092 1.5e-29 134.0 122 54.1
Eucgr.E04359 Eucalyptus grandis HOM05D007217 ORTHO05D009092 9.7e-29 131.3 138 48.6
Gohir.A06G140100 Gossypium hirsutum HOM05D007217 ORTHO05D009092 9.7e-29 131.3 118 57.6
Gohir.D06G146500 Gossypium hirsutum HOM05D007217 ORTHO05D009092 1.3e-28 131.0 118 57.6
Prupe.4G105800 Prunus persica HOM05D007217 ORTHO05D009092 1.3e-28 131.0 142 50.7
Gorai.010G170900 Gossypium raimondii HOM05D007217 ORTHO05D009092 2.2e-28 130.2 118 57.6
Potri.003G149100 Populus trichocarpa HOM05D007217 ORTHO05D009092 2.2e-28 130.2 117 54.7
HanXRQChr04g0107331 Helianthus annuus HOM05D007217 ORTHO05D009092 2.8e-28 129.8 170 44.1
TWI09G0397 Tripterygium wilfordii HOM05D007217 ORTHO05D009092 6.3e-28 128.6 121 55.4
DCAR_001337 Daucus carota HOM05D007217 ORTHO05D009092 8.2e-28 128.3 122 53.3
QL05p062902 Quercus lobata HOM05D007217 ORTHO05D009092 8.2e-28 128.3 116 57.8
SGA_v2.0_scaffold3G01474 Striga asiatica HOM05D007217 ORTHO05D009092 1.4e-27 127.5 137 49.6
Ciclev10029535m.g Citrus clementina HOM05D007217 ORTHO05D009092 1.8e-27 127.1 115 57.4
THA.LOC104808222 Tarenaya hassleriana HOM05D007217 ORTHO05D009092 1.8e-27 127.1 119 53.8
MD05G1258900 Malus domestica HOM05D007217 ORTHO05D009092 2.4e-27 126.7 141 51.1
Nn7g37971 Nelumbo nucifera HOM05D007217 ORTHO05D009092 4.1e-27 125.9 135 50.4
ClCG07G002120 Citrullus lanatus HOM05D007217 ORTHO05D009092 5.3e-27 125.6 118 52.5
Potri.001G081300 Populus trichocarpa HOM05D007217 ORTHO05D009092 5.3e-27 125.6 135 45.9
Sc06g0009730 Simmondsia chinensis HOM05D007217 ORTHO05D009092 6.9e-27 125.2 139 48.9
TWI09G0788 Tripterygium wilfordii HOM05D007217 ORTHO05D009092 6.9e-27 125.2 121 53.7
Cpa.g.sc64.50 Carica papaya HOM05D007217 ORTHO05D009092 9.0e-27 124.8 115 53.9
Ciclev10018165m.g Citrus clementina HOM05D007217 ORTHO05D009092 9.0e-27 124.8 116 55.2
Oeu043290.1 Olea europaea HOM05D007217 ORTHO05D009092 9.0e-27 124.8 125 50.4
DCAR_031675 Daucus carota HOM05D007217 ORTHO05D009092 1.2e-26 124.4 125 52.0
Eucgr.E02022 Eucalyptus grandis HOM05D007217 ORTHO05D009092 5.9e-26 122.1 140 47.1
Lsat_1_v5_gn_7_8820 Lactuca sativa HOM05D007217 ORTHO05D009092 1.3e-25 120.9 134 47.0
Medtr8g011490 Medicago truncatula HOM05D007217 ORTHO05D009092 1.3e-25 120.9 143 48.3
Lsat_1_v5_gn_4_36120 Lactuca sativa HOM05D007217 ORTHO05D009092 2.2e-25 120.2 121 48.8
MD10G1238500 Malus domestica HOM05D007217 ORTHO05D009092 5.0e-25 119.0 117 51.3
MELO3C015565.2 Cucumis melo HOM05D007217 ORTHO05D009092 6.5e-25 118.6 117 50.4
Hma1.2p1_0074F.1_g039010 Hydrangea macrophylla HOM05D007217 ORTHO05D009092 6.5e-25 118.6 113 54.0
Actinidia38172 Actinidia chinensis HOM05D007217 ORTHO05D009092 1.4e-24 117.5 91 64.8
SalBow8G5173 Salvia bowleyana HOM05D007217 ORTHO05D009092 1.9e-24 117.1 124 48.4
unitig_749.g13716 Utricularia gibba HOM05D007217 ORTHO05D009092 1.9e-24 117.1 139 44.6
Lj5g0013157 Lotus japonicus HOM05D007217 ORTHO05D009092 3.2e-24 116.3 143 46.9
MBI18_g37406_MAGBIO Magnolia biondii HOM05D007217 ORTHO05D009092 5.5e-24 115.5 112 53.6
Sed0002565 Sechium edule HOM05D007217 ORTHO05D009092 1.2e-23 114.4 118 49.2
CsaV3_3G030060 Cucumis sativus L. HOM05D007217 ORTHO05D009092 1.6e-23 114.0 136 44.9
EL10Ac9g22805 Beta vulgaris HOM05D007217 ORTHO05D009092 2.7e-23 113.2 98 58.2
GSVIVG01013634001 Vitis vinifera HOM05D007217 ORTHO05D009092 2.7e-23 113.2 117 52.1
MELO3C022720.2 Cucumis melo HOM05D007217 ORTHO05D009092 3.6e-23 112.8 117 48.7
Gorai.011G051100 Gossypium raimondii HOM05D007217 ORTHO05D009092 3.6e-23 112.8 140 47.1
Aa31LG4G550 Aethionema arabicum HOM05D002649 ORTHO05D002838 6.1e-23 112.1 117 52.1
CsaV3_4G011770 Cucumis sativus L. HOM05D007217 ORTHO05D009092 6.1e-23 112.1 135 44.4
Glyma.08G176100 Glycine max HOM05D007217 ORTHO05D009092 6.1e-23 112.1 140 44.3
Lj6g0006317 Lotus japonicus HOM05D007217 ORTHO05D009092 6.1e-23 112.1 117 50.4
Gohir.D10G048000 Gossypium hirsutum HOM05D007217 ORTHO05D009092 1.0e-22 111.3 140 47.1
Glyma.15G250400 Glycine max HOM05D007217 ORTHO05D009092 1.3e-22 110.9 141 44.0
AL2G41250 Arabidopsis lyrata HOM05D007217 ORTHO05D009092 3.0e-22 109.8 119 48.7
Lalb_Chr16g0392431 Lupinus albus HOM05D007217 ORTHO05D009092 3.0e-22 109.8 114 48.2
Carub.0007s3329 Capsella rubella HOM05D007217 ORTHO05D009092 1.9e-21 107.1 103 52.4
VMungo1383G0797 Vigna mungo HOM05D007217 ORTHO05D009092 1.9e-21 107.1 126 46.8
AT1G80245 Arabidopsis thaliana HOM05D007217 ORTHO05D009092 2.5e-21 106.7 119 47.9
AT4G00695 Arabidopsis thaliana HOM05D007217 ORTHO05D009092 2.5e-21 106.7 107 53.3
CARHR074240 Cardamine hirsuta HOM05D007217 ORTHO05D009092 2.5e-21 106.7 119 48.7
Phvul.008G108200 Phaseolus vulgaris HOM05D007217 ORTHO05D009092 2.5e-21 106.7 129 47.3
Gohir.A10G046700 Gossypium hirsutum HOM05D007217 ORTHO05D009092 3.3e-21 106.3 87 62.1
Sp5g35560 Schrenkiella parvula HOM05D007217 ORTHO05D009092 9.7e-21 104.8 133 41.4
Nitab4.5_0002858g0010 Nicotiana tabacum HOM05D007217 ORTHO05D009092 1.3e-20 104.4 96 56.2
Sp1g21760 Schrenkiella parvula HOM05D007217 ORTHO05D009092 2.8e-20 103.2 117 47.0
AUR62017567 Chenopodium quinoa HOM05D007217 ORTHO05D009092 3.7e-20 102.8 133 42.9
BcaB05g25284 Brassica carinata HOM05D004952 ORTHO05D006131 4.8e-20 102.4 136 43.4
Psat0s5329g0080 Pisum sativum HOM05D007217 ORTHO05D009092 4.8e-20 102.4 125 41.6
BcaC03g15989 Brassica carinata HOM05D007217 ORTHO05D009092 6.3e-20 102.1 116 47.4
C02p37450 Brassica napus HOM05D004952 ORTHO05D006131 6.3e-20 102.1 108 49.1
FAN21G1503 Fragaria x ananassa HOM05D007217 ORTHO05D009092 8.2e-20 101.7 136 43.4
AL7G47090 Arabidopsis lyrata HOM05D007217 ORTHO05D009092 1.1e-19 101.3 107 51.4
BolC2t09757H Brassica oleracea HOM05D004952 ORTHO05D006131 1.8e-19 100.5 117 46.2
FAN16G2896 Fragaria x ananassa HOM05D007217 ORTHO05D009092 2.4e-19 100.1 136 43.4
BraA02t07362Z Brassica rapa HOM05D004952 ORTHO05D006131 5.3e-19 99.0 116 46.6
Thhalv10019705m.g Eutrema salsugineum HOM05D007217 ORTHO05D009092 4.5e-18 95.9 99 49.5
arahy.Tifrunner.gnm1.ann1.3NP1QY Arachis hypogaea HOM05D007217 ORTHO05D009092 3.8e-17 92.8 129 41.1
arahy.Tifrunner.gnm1.ann1.Z0SJI2 Arachis hypogaea HOM05D007217 ORTHO05D009092 1.4e-16 90.9 107 43.9
Nitab4.5_0004758g0070 Nicotiana tabacum HOM05D007217 ORTHO05D009092 1.4e-16 90.9 127 41.7
arahy.Tifrunner.gnm1.ann1.TIKV1F Arachis hypogaea HOM05D007217 ORTHO05D009092 1.9e-16 90.5 107 44.9
COL.COLO4_30930 Corchorus olitorius HOM05D007217 ORTHO05D009092 7.9e-15 85.1 54 74.1
A02p23690 Brassica napus HOM05D004952 ORTHO05D006131 1.0e-14 84.7 168 35.7
Psat4g125640 Pisum sativum HOM05D007217 ORTHO05D009092 3.0e-14 83.2 138 36.2
HPP92_002517 Vanilla planifolia HOM05D007217 ORTHO05D009092 2.0e-13 80.5 94 46.8
HPP92_002534 Vanilla planifolia HOM05D007217 ORTHO05D009092 2.0e-13 80.5 94 46.8
Hund24191 Selenicereus undatus HOM05D007217 ORTHO05D009092 5.7e-13 79.0 63 55.6
C02p14430 Brassica napus HOM05D007217 ORTHO05D009092 2.2e-09 67.0 57 54.4
BolC2t07567H Brassica oleracea HOM05D007217 ORTHO05D009092 2.2e-09 67.0 57 54.4
ATR0763G267 Amborella trichopoda HOM05D007217 ORTHO05D009092 3.8e-09 66.2 97 39.2
Zm00001eb228930 Zea mays HOM05D007217 ORTHO05D009092 1.9e-08 63.9 77 45.5
Nitab4.5_0000978g0250 Nicotiana tabacum HOM05D007217 ORTHO05D009092 4.2e-08 62.8 109 35.8
CDE03G0351 Ceratophyllum demersum HOM05D007217 ORTHO05D009092 2.1e-07 60.5 66 47.0
Sabra03G0108500 Salix brachista HOM05D007217 ORTHO05D009092 2.1e-07 60.5 85 42.4
CDE03G0339 Ceratophyllum demersum HOM05D007217 ORTHO05D009092 3.6e-07 59.7 66 47.0
Rhsim04G0123400 Rhododendron simsii HOM05D007559 ORTHO05D009642 5.2e-06 55.8 38 63.2


User provided reference genes

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