Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Dinv20245 Davidia involucrata HOM05D008473 ORTHO05D000921 5.2e-142 507.7 253 100.0
Dinv32769 Davidia involucrata HOM05D008473 ORTHO05D000921 1.6e-61 240.4 127 93.7
Dinv11570 Davidia involucrata HOM05D008473 ORTHO05D000921 1.7e-60 236.9 186 62.4
Dinv14632 Davidia involucrata HOM05D008473 ORTHO05D000921 1.7e-60 236.9 129 90.7
Dinv34380 Davidia involucrata HOM05D008473 ORTHO05D000921 2.6e-56 223.0 124 89.5
Dinv11553 Davidia involucrata HOM05D005899 ORTHO05D007445 3.5e-53 212.6 130 83.8
Dinv03278 Davidia involucrata HOM05D008473 ORTHO05D000921 1.6e-45 187.2 186 53.2
Dinv05111 Davidia involucrata HOM05D008473 ORTHO05D000921 6.1e-42 175.3 185 47.6
Dinv37362 Davidia involucrata HOM05D008473 ORTHO05D000921 1.4e-38 164.1 137 58.4
Dinv26723 Davidia involucrata HOM05D008473 ORTHO05D000921 6.0e-37 158.7 131 60.3
Dinv24667 Davidia involucrata HOM05D008473 ORTHO05D000921 2.3e-36 156.8 131 59.5
Dinv39796 Davidia involucrata HOM05D008473 ORTHO05D000921 5.0e-36 155.6 131 59.5
Dinv06126 Davidia involucrata HOM05D008473 ORTHO05D009617 5.6e-35 152.1 113 71.7
Dinv10275 Davidia involucrata HOM05D008473 ORTHO05D000921 2.8e-34 149.8 180 48.3
Dinv10828 Davidia involucrata HOM05D008473 ORTHO05D000921 2.2e-31 140.2 166 48.8
Hma1.2p1_1940F.1_g308350 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 2.5e-27 126.7 188 39.4
Aqoxy2G01241 Aquilegia oxysepala HOM05D003171 ORTHO05D000921 9.5e-27 124.8 198 34.3
COL.COLO4_15155 Corchorus olitorius HOM05D003171 ORTHO05D000921 4.4e-24 115.9 186 36.6
PSO170G3394 Papaver somniferum HOM05D003171 ORTHO05D000921 6.4e-23 112.1 193 36.3
PSO700G0266 Papaver somniferum HOM05D003171 ORTHO05D000921 6.4e-23 112.1 193 36.3
PSO724G0339 Papaver somniferum HOM05D003171 ORTHO05D000921 8.3e-23 111.7 193 36.3
Prupe.7G061200 Prunus persica HOM05D003171 ORTHO05D000921 1.4e-22 110.9 189 36.0
PSO832G2613 Papaver somniferum HOM05D003171 ORTHO05D000921 2.4e-22 110.2 193 36.3
CSS0031995 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 4.1e-22 109.4 190 38.9
CSS0032086 Camellia sinensis var. sinensis HOM05D000949 ORTHO05D000921 5.4e-22 109.0 187 39.0
Dinv05737 Davidia involucrata HOM05D008473 ORTHO05D000921 5.4e-22 109.0 113 56.6
Dinv22077 Davidia involucrata HOM05D008473 ORTHO05D000921 2.1e-21 107.1 143 44.1
RcHm_v2.0_Chr1g0354771 Rosa chinensis HOM05D003171 ORTHO05D000921 1.7e-20 104.0 190 34.7
Dinv33374 Davidia involucrata HOM05D008473 ORTHO05D000921 6.6e-20 102.1 106 50.9
Dinv15889 Davidia involucrata HOM05D008473 ORTHO05D000921 8.6e-20 101.7 113 54.0
CSS0006884 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 1.5e-19 100.9 214 33.6
Dinv17771 Davidia involucrata HOM05D008473 ORTHO05D000921 3.3e-19 99.8 105 57.1
Dinv02110 Davidia involucrata HOM05D008473 ORTHO05D000921 4.3e-19 99.4 131 45.8
CANSAT21G0626 Cannabis sativa HOM05D000665 ORTHO05D000921 5.6e-19 99.0 230 31.3
Dinv01610 Davidia involucrata HOM05D008473 ORTHO05D000921 9.5e-19 98.2 131 43.5
Glyma.02G173400 Glycine max HOM05D003171 ORTHO05D000921 1.6e-18 97.4 192 35.4
Glyma.15G177200 Glycine max HOM05D003171 ORTHO05D000921 2.8e-18 96.7 196 34.2
Sabra17G0103300 Salix brachista HOM05D003171 ORTHO05D000921 2.8e-18 96.7 221 33.9
CSS0034290 Camellia sinensis var. sinensis HOM05D008473 ORTHO05D000921 4.7e-18 95.9 163 40.5
Potri.017G120900 Populus trichocarpa HOM05D003171 ORTHO05D000921 4.7e-18 95.9 190 37.9
Ca_02097_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 6.2e-18 95.5 187 35.3
Dinv07352 Davidia involucrata HOM05D008473 ORTHO05D000921 6.2e-18 95.5 131 43.5
Dinv36872 Davidia involucrata HOM05D008473 ORTHO05D000921 6.2e-18 95.5 131 42.0
Sabra17G0100000 Salix brachista HOM05D003171 ORTHO05D000921 8.1e-18 95.1 221 33.5
TWI38G2389 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 1.1e-17 94.7 191 35.6
CSS0035449 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 1.8e-17 94.0 187 32.6
CANSAT01G0669 Cannabis sativa HOM05D000665 ORTHO05D000921 1.8e-17 94.0 259 29.0
FAN22G1922 Fragaria x ananassa HOM05D003171 ORTHO05D000921 1.8e-17 94.0 187 32.1
Dinv42478 Davidia involucrata HOM05D008473 ORTHO05D000921 2.4e-17 93.6 131 42.0
Ca_18689_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 4.0e-17 92.8 187 34.8
PSO384G1197 Papaver somniferum HOM05D003171 ORTHO05D000921 4.0e-17 92.8 177 35.6
Oeu059221.1 Olea europaea HOM05D003171 ORTHO05D000921 6.8e-17 92.0 203 33.5
CSS0048883 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 8.9e-17 91.7 186 35.5
FAN06G0566 Fragaria x ananassa HOM05D003171 ORTHO05D000921 8.9e-17 91.7 187 32.6
Dinv38053 Davidia involucrata HOM05D008473 ORTHO05D000921 1.2e-16 91.3 113 46.9
Dinv44487 Davidia involucrata HOM05D008473 ORTHO05D000921 1.5e-16 90.9 104 49.0
Atru.chr10.354 Acer truncatum HOM05D028950 ORTHO05D000921 2.6e-16 90.1 177 32.8
CANSAT11G0381 Cannabis sativa HOM05D003171 ORTHO05D000921 2.6e-16 90.1 234 31.2
Dinv15517 Davidia involucrata HOM05D008473 ORTHO05D000921 2.6e-16 90.1 124 46.0
Dinv21256 Davidia involucrata HOM05D008473 ORTHO05D000921 2.6e-16 90.1 124 46.0
TWI34G0686 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 4.4e-16 89.4 194 33.5
FAN26G2385 Fragaria x ananassa HOM05D003171 ORTHO05D000921 5.8e-16 89.0 184 31.5
TWI36G0176 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 5.8e-16 89.0 194 34.0
CSS0033827 Camellia sinensis var. sinensis HOM05D000949 ORTHO05D000921 9.9e-16 88.2 183 33.9
Dinv26654 Davidia involucrata HOM05D008473 ORTHO05D000921 9.9e-16 88.2 124 45.2
ECA246G1509 Erigeron canadensis HOM05D000006 ORTHO05D000001 9.9e-16 88.2 256 28.5
Oeu046730.1 Olea europaea HOM05D003171 ORTHO05D000921 9.9e-16 88.2 184 34.2
Ca_19984_v3 Cicer arietinum L. HOM05D011725 ORTHO05D000921 1.3e-15 87.8 226 30.5
CANSAT25G2398 Cannabis sativa HOM05D000665 ORTHO05D000921 2.2e-15 87.0 190 31.1
Oeu025535.3 Olea europaea HOM05D000622 ORTHO05D000475 2.9e-15 86.7 233 30.9
Dinv17515 Davidia involucrata HOM05D008473 ORTHO05D000921 4.9e-15 85.9 98 46.9
Dinv30729 Davidia involucrata HOM05D008473 ORTHO05D000921 4.9e-15 85.9 114 46.5
TWI63G0719 Tripterygium wilfordii HOM05D003171 ORTHO05D000921 4.9e-15 85.9 182 34.6
Dinv17407 Davidia involucrata HOM05D008473 ORTHO05D000921 8.4e-15 85.1 104 48.1
MD03G1270400 Malus domestica HOM05D003171 ORTHO05D000921 8.4e-15 85.1 193 32.1
CSS0007117 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 2.4e-14 83.6 176 35.2
Dinv21489 Davidia involucrata HOM05D008473 ORTHO05D000921 3.2e-14 83.2 112 47.3
Dinv24312 Davidia involucrata HOM05D008473 ORTHO05D000921 3.2e-14 83.2 154 39.6
FAN23G0960 Fragaria x ananassa HOM05D003171 ORTHO05D000921 5.4e-14 82.4 183 29.0
Cfa017593 Carpinus fangiana HOM05D011725 ORTHO05D016914 9.2e-14 81.6 195 30.8
CANSAT54G2744 Cannabis sativa HOM05D003171 ORTHO05D000921 1.2e-13 81.3 201 31.3
TWI74G1594 Tripterygium wilfordii HOM05D000196 ORTHO05D000279 1.2e-13 81.3 190 31.6
ECA233G3457 Erigeron canadensis HOM05D003171 ORTHO05D000921 2.1e-13 80.5 225 29.3
QL10p054458 Quercus lobata HOM05D003171 ORTHO05D000921 2.7e-13 80.1 193 28.5
Cfa002544 Carpinus fangiana HOM05D011725 ORTHO05D016914 3.5e-13 79.7 214 29.4
Ciclev10018241m.g Citrus clementina HOM05D003171 ORTHO05D000921 3.5e-13 79.7 177 32.8
QL10p052222 Quercus lobata HOM05D003171 ORTHO05D000921 3.5e-13 79.7 196 29.1
QL10p052249 Quercus lobata HOM05D003171 ORTHO05D000921 3.5e-13 79.7 193 28.5
Hma1.2p1_0471F.1_g159430 Hydrangea macrophylla HOM05D003171 ORTHO05D000921 4.6e-13 79.3 119 40.3
Cfa007688 Carpinus fangiana HOM05D011725 ORTHO05D016914 6.0e-13 79.0 199 29.6
Oeu010697.1 Olea europaea HOM05D003171 ORTHO05D000921 7.8e-13 78.6 202 31.2
Cfa005675 Carpinus fangiana HOM05D011725 ORTHO05D016914 1.7e-12 77.4 199 30.2
Ciclev10028960m.g Citrus clementina HOM05D003171 ORTHO05D000921 1.7e-12 77.4 190 30.5
PGR031G3489 Punica granatum HOM05D003171 ORTHO05D000921 1.7e-12 77.4 187 31.0
CANSAT54G0360 Cannabis sativa HOM05D000665 ORTHO05D000921 2.3e-12 77.0 234 27.8
Ciclev10033478m.g Citrus clementina HOM05D003171 ORTHO05D000921 3.0e-12 76.6 172 32.6
COL.COLO4_13994 Corchorus olitorius HOM05D008473 ORTHO05D016003 3.0e-12 76.6 142 33.8
Lj6g0024631 Lotus japonicus HOM05D003171 ORTHO05D000921 5.1e-12 75.9 141 35.5
Lj6g0011077 Lotus japonicus HOM05D003171 ORTHO05D000921 6.6e-12 75.5 131 39.7
Hma1.2p1_2380F.1_g320966 Hydrangea macrophylla HOM05D000665 ORTHO05D000921 1.5e-11 74.3 206 31.6
arahy.Tifrunner.gnm1.ann1.PZ3VRY Arachis hypogaea HOM05D000599 ORTHO05D000554 1.9e-11 73.9 178 32.0
Glyma.17G029100 Glycine max HOM05D003171 ORTHO05D000921 1.9e-11 73.9 163 33.7
CSS0000387 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 2.5e-11 73.6 208 29.8
CSS0046487 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 2.5e-11 73.6 200 30.5
Dinv36419 Davidia involucrata HOM05D007209 ORTHO05D000921 3.3e-11 73.2 196 32.7
QL06p033820 Quercus lobata HOM05D003171 ORTHO05D000921 3.3e-11 73.2 190 30.5
Dinv06146 Davidia involucrata HOM05D003171 ORTHO05D000921 4.3e-11 72.8 51 64.7
FAN11G3401 Fragaria x ananassa HOM05D003171 ORTHO05D000921 5.6e-11 72.4 162 29.6
Dinv29901 Davidia involucrata HOM05D007209 ORTHO05D000921 7.3e-11 72.0 188 33.0
Prupe.6G193000 Prunus persica HOM05D003171 ORTHO05D000921 1.2e-10 71.2 148 34.5
QL05p040133 Quercus lobata HOM05D003171 ORTHO05D000921 2.1e-10 70.5 191 29.8
Atru.chr8.561 Acer truncatum HOM05D000034 ORTHO05D000037 2.8e-10 70.1 87 42.5
Hma1.2p1_1786F.1_g302300 Hydrangea macrophylla HOM05D000665 ORTHO05D000921 2.8e-10 70.1 206 30.1
QL10p053818 Quercus lobata HOM05D003171 ORTHO05D000921 2.8e-10 70.1 191 30.4
Prupe.8G054800 Prunus persica HOM05D003171 ORTHO05D000921 3.6e-10 69.7 185 31.4
QL02p070399 Quercus lobata HOM05D003171 ORTHO05D000921 3.6e-10 69.7 191 29.8
QL05p062248 Quercus lobata HOM05D003171 ORTHO05D000921 3.6e-10 69.7 191 29.8
QL09p032434 Quercus lobata HOM05D003171 ORTHO05D000921 3.6e-10 69.7 191 29.8
CSS0039140 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 4.7e-10 69.3 208 29.3
Ciclev10024555m.g Citrus clementina HOM05D003171 ORTHO05D000921 8.1e-10 68.6 185 30.3
CSS0041063 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 1.1e-09 68.2 197 28.4
Ciclev10006620m.g Citrus clementina HOM05D003171 ORTHO05D000921 1.4e-09 67.8 147 32.7
Dinv29345 Davidia involucrata HOM05D000665 ORTHO05D000921 1.4e-09 67.8 198 28.8
Dinv30736 Davidia involucrata HOM05D008473 ORTHO05D000921 1.4e-09 67.8 71 63.4
arahy.Tifrunner.gnm1.ann1.QX6E0G Arachis hypogaea HOM05D008473 ORTHO05D000921 1.8e-09 67.4 168 29.2
Ciclev10028952m.g Citrus clementina HOM05D003171 ORTHO05D000921 1.8e-09 67.4 187 29.9
FAN03G0665 Fragaria x ananassa HOM05D003171 ORTHO05D000921 1.8e-09 67.4 59 52.5
QL09p025174 Quercus lobata HOM05D003171 ORTHO05D000921 4.0e-09 66.2 191 28.8
Medtr4g051480 Medicago truncatula HOM05D001243 ORTHO05D000843 5.2e-09 65.9 182 30.8
Medtr4g092300 Medicago truncatula HOM05D001243 ORTHO05D000843 5.2e-09 65.9 182 30.8
Oeu041025.1 Olea europaea HOM05D000254 ORTHO05D000921 5.2e-09 65.9 56 50.0
TPR.G13935 Trifolium pratense HOM05D000665 ORTHO05D000921 5.2e-09 65.9 178 30.3
Oeu059139.1 Olea europaea HOM05D003171 ORTHO05D000921 9.0e-09 65.1 56 48.2
Actinidia03712 Actinidia chinensis HOM05D000665 ORTHO05D000921 1.2e-08 64.7 195 28.7
PSO675G2453 Papaver somniferum HOM05D003171 ORTHO05D000921 1.2e-08 64.7 58 51.7
GSVIVG01021695001 Vitis vinifera HOM05D008473 ORTHO05D000921 1.5e-08 64.3 95 38.9
CSS0011559 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 2.0e-08 63.9 186 30.1
Medtr8g085310 Medicago truncatula HOM05D001243 ORTHO05D000843 2.6e-08 63.5 185 28.6
Aqoxy5G02246 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 4.4e-08 62.8 62 43.5
CANSAT35G0983 Cannabis sativa HOM05D003171 ORTHO05D000921 4.4e-08 62.8 59 49.2
Ciclev10013577m.g Citrus clementina HOM05D003171 ORTHO05D000921 9.9e-08 61.6 119 33.6
CSS0003024 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D108902 1.3e-07 61.2 169 32.0
CSS0042299 Camellia sinensis var. sinensis HOM05D003171 ORTHO05D000921 1.3e-07 61.2 145 31.0
Medtr3g053640 Medicago truncatula HOM05D003171 ORTHO05D000921 1.3e-07 61.2 184 29.3
TAR080G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 1.7e-07 60.8 200 31.0
Cfa002883 Carpinus fangiana HOM05D020463 ORTHO05D022255 2.2e-07 60.5 212 26.9
Lj3A995G65 Lonicera japonica HOM05D008338 ORTHO05D000921 2.2e-07 60.5 187 25.7
CSS0004715 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 2.9e-07 60.1 198 26.8
CANSAT80G1832 Cannabis sativa HOM05D000034 ORTHO05D000921 2.9e-07 60.1 165 28.5
Oeu050871.1 Olea europaea HOM05D003171 ORTHO05D000921 2.9e-07 60.1 84 36.9
CANSAT64G2197 Cannabis sativa HOM05D003171 ORTHO05D000921 4.9e-07 59.3 132 31.8
FvH4_4g13820 Fragaria vesca HOM05D003171 ORTHO05D000921 4.9e-07 59.3 97 37.1
QL93p0107_0126 Quercus lobata HOM05D024079 ORTHO05D000921 1.9e-06 57.4 194 26.8
CSS0023692 Camellia sinensis var. sinensis HOM05D000665 ORTHO05D000921 2.4e-06 57.0 220 25.9
TPR.G16880 Trifolium pratense HOM05D000665 ORTHO05D000921 3.2e-06 56.6 178 28.1
Lju1040A2T29 Lonicera japonica HOM05D008338 ORTHO05D000921 4.2e-06 56.2 187 27.8
Cfa019942 Carpinus fangiana HOM05D020463 ORTHO05D022255 5.4e-06 55.8 185 25.9
Ciclev10010186m.g Citrus clementina HOM05D003171 ORTHO05D000921 9.3e-06 55.1 62 45.2


User provided reference genes

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